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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG89812
KRG94975
KRH18664
KRH31638
KRH69070

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT4G24390.1 KRG89812 AT2G41090.1 17360592
AT4G24390.1 KRG94975 AT2G41090.1 17360592
AT4G24390.1 KRH18664 AT2G41090.1 17360592
AT4G24390.1 KRG89812 AT2G41100.1 17360592
AT4G24390.1 KRG94975 AT2G41100.1 17360592
AT4G24390.1 KRH18664 AT2G41100.1 17360592
AT4G24390.1 KRH31638 AT4G14640.1 17360592
AT4G24390.1 KRH69070 AT4G14640.1 17360592
AT4G24390.1 KRG89812 AT5G21274.1 17360592
AT4G24390.1 KRG94975 AT5G21274.1 17360592
AT4G24390.1 KRH18664 AT5G21274.1 17360592
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH16819 Soybean cytosol 93.02 91.56
KRH62206 Soybean cytosol 73.17 79.07
KRH52925 Soybean cytosol 73.17 78.53
VIT_18s0001g07120.t01 Wine grape cytosol 71.43 75.76
AT5G49980.1 Thale cress nucleus 69.37 70.6
Solyc04g074980.2.1 Tomato cytosol 69.52 70.31
PGSC0003DMT400005419 Potato cytosol 67.94 69.82
CDY21439 Canola cytosol 66.83 69.7
CDX83172 Canola cytosol, plastid 67.14 69.69
Bra000604.1-P Field mustard cytosol, plastid 67.14 69.69
CDY03450 Canola cytosol 64.76 66.89
Bra013798.1-P Field mustard cytosol 64.29 66.72
Os03t0187500-01 Rice cytosol 26.67 66.67
CDY34286 Canola cytosol 64.29 66.5
AT4G24390.1 Thale cress cytosol, plastid 64.6 65.33
GSMUA_Achr3P06710_001 Banana cytosol 57.78 63.53
GSMUA_Achr5P05520_001 Banana cytosol 58.73 63.03
HORVU4Hr1G080360.1 Barley cytosol, peroxisome, plastid 34.13 62.68
GSMUA_Achr7P11780_001 Banana cytosol 57.94 61.86
HORVU4Hr1G015730.1 Barley cytosol, peroxisome, plastid 32.7 61.68
TraesCS7B01G081200.1 Wheat cytosol 59.37 59.84
TraesCS7A01G176200.1 Wheat cytosol 59.05 59.62
TraesCS7D01G177500.1 Wheat cytosol, plastid 59.37 59.46
HORVU6Hr1G077570.1 Barley mitochondrion 59.21 59.39
Os02t0759700-01 Rice cytosol 60.0 59.34
TraesCS6B01G345800.1 Wheat plastid 59.84 58.45
TraesCS6D01G294600.1 Wheat plastid 60.0 58.33
TraesCS6A01G315300.1 Wheat plastid 59.84 58.27
TraesCS4D01G301800.1 Wheat cytosol, nucleus, peroxisome 56.03 57.87
EES05842 Sorghum plastid 60.79 57.85
Zm00001d018126_P001 Maize plastid 60.95 57.74
TraesCS4A01G001800.1 Wheat cytosol 55.4 57.4
Zm00001d052188_P001 Maize plastid 60.63 57.36
Zm00001d027975_P001 Maize cytosol 53.02 55.85
EER92735 Sorghum cytosol 52.86 55.32
Zm00001d048233_P001 Maize cytosol 52.38 55.18
HORVU4Hr1G078120.4 Barley cytosol, plastid 55.24 51.03
KRH70053 Soybean cytosol 45.56 50.09
KRG94665 Soybean cytosol 45.08 49.65
KRH31921 Soybean cytosol 46.03 49.57
KRH06858 Soybean cytosol 44.6 49.13
KRG96377 Soybean cytosol 45.71 49.06
KRH71533 Soybean cytosol 45.56 49.06
KRH41935 Soybean cytosol 45.08 49.05
KRH68108 Soybean cytosol 45.56 48.98
KRH49941 Soybean cytosol 44.44 48.44
KRH08397 Soybean cytosol 43.65 47.99
KRH14993 Soybean cytosol 28.57 31.69
KRH73146 Soybean cytosol 29.21 31.51
KRG97777 Soybean cytosol 29.05 31.02
KRH31107 Soybean cytosol 29.05 31.02
Protein Annotations
EMBL:ACUP02001211EnsemblPlants:KRH72427EnsemblPlantsGene:GLYMA_02G211800EntrezGene:100807836Gene3D:1.20.1280.50Gene3D:3.80.10.10
GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:F-box-like_dom_sfInterPro:IPR032675InterPro:LRR_dom_sf
PANTHER:PTHR43944PANTHER:PTHR43944:SF8ProteinID:KRH72427ProteinID:KRH72427.1SEG:segSUPFAM:SSF52047
SUPFAM:SSF81383UniParc:UPI000233765FUniProt:I1JGX7MapMan:11.2.2.1.1MapMan:19.2.2.8.1.4.6:
Description
hypothetical protein
Coordinates
chr2:-:39709361..39712971
Molecular Weight (calculated)
70178.2 Da
IEP (calculated)
4.968
GRAVY (calculated)
-0.063
Length
630 amino acids
Sequence
(BLAST)
001: MRDKSESHPS TNSEDDHRSS PLLDLACAEI TESSNSKTRT CGPFPGSGPS EPQAPFPDQV LENVLENVLH FLPSRRDRNA ASLVCRSWYR AEALTRSELF
101: IGNCYALSPT RATARFTRVM SVTVKGKPRF ADFDLMPPDW GAHFGPWASA LAQAYPWLEK LHLKRMLVTD ADLALIADSF AGFRELVLVC CEGFGTPGLA
201: AVASKCRLLR VLELVESVVE VEDDEEVDWI SCFPETQTNM ESLVFDCVEV PINFEALEGL VARSPRLKKL RLNQFVSMAQ LYRLLLRAPQ LTHLGTGSFS
301: ATEAGVVGDQ EPDYAAAFEA CRSLVCLSGF REIWADYLPA IYPVCANLTS LNLSYADINT DQLKSVICHC HKLQIFWVLD SIRDEGLQAV AATCKDLREL
401: RVFPMDAREE TDGPVSEVGF EAISQGCRKL ESILFLCQRM TNAAVVAMSK NCPDLVVFRL CIIGRYRPDP VTQEPMDEGF GAIVMNCKKL TRLAVSGLLT
501: DRAFEYIGTY GKLVRTLSVA FAGDTDVGLK YVLKGCPNLQ KLEIRDSPFG DGALRSGLHH YYNMRFLWMS TCKLTLQACQ EVARVLPNLV FEVINNNSEE
601: NAGDEVETLY MYRSLDGPRD DAPRFVTILQ
Best Arabidopsis Sequence Match ( AT5G49980.1 )
(BLAST)
001: MTQDRSEMSE DDDDQQSPPL DLPSTAIADP CSSSSSPNKS RNCISNSQTF PDHVLENVLE NVLQFLDSRC DRNAASLVCK SWWRVEALTR SEVFIGNCYA
101: LSPARLTQRF KRVRSLVLKG KPRFADFNLM PPDWGANFAP WVSTMAQAYP CLEKVDLKRM FVTDDDLALL ADSFPGFKEL ILVCCEGFGT SGISIVANKC
201: RKLKVLDLIE SEVTDDEVDW ISCFPEDVTC LESLAFDCVE APINFKALEG LVARSPFLKK LRLNRFVSLV ELHRLLLGAP QLTSLGTGSF SHDEEPQSEQ
301: EPDYAAAFRA CKSVVCLSGF RELMPEYLPA IFPVCANLTS LNFSYANISP DMFKPIILNC HKLQVFWALD SICDEGLQAV AATCKELREL RIFPFDPRED
401: SEGPVSELGL QAISEGCRKL ESILYFCQRM TNAAVIAMSE NCPELTVFRL CIMGRHRPDH VTGKPMDEGF GAIVKNCKKL TRLAVSGLLT DQAFRYMGEY
501: GKLVRTLSVA FAGDSDMALR HVLEGCPRLQ KLEIRDSPFG DVALRSGMHR YYNMRFVWMS ACSLSKGCCK DIARAMPNLV VEVIGSDDDD DNRDYVETLY
601: MYRSLDGPRN DAPKFVTIL
Arabidopsis Description
AFB5AFB5 [Source:UniProtKB/TrEMBL;Acc:A0A178UB83]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.