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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG92429
KRG92430
KRH03236
KRH28611
KRH34375
KRH34377
KRH54335
KRH54336
KRH57122
KRH63609
KRH69048
KRH76867

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G62980.1 KRG92429 AT1G04250.1 11713520
AT3G62980.1 KRH34377 AT1G04250.1 11713520
AT3G62980.1 KRG92429 AT3G23050.1 11713520
AT3G62980.1 KRH34377 AT3G23050.1 11713520
AT3G62980.1 KRG92430 AT4G14560.1 15546359
AT3G62980.1 KRH34375 AT4G14560.1 15546359
AT3G62980.1 KRH69048 AT4G14560.1 15546359
AT3G62980.1 KRH28611 AT4G36800.1 12682009
AT3G62980.1 KRH76867 AT4G36800.1 12682009
AT3G62980.1 KRH03236 AT5G63110.1 12445118
AT3G62980.1 KRH54335 AT5G63110.1 12445118
AT3G62980.1 KRH54336 AT5G63110.1 12445118
AT3G62980.1 KRH57122 AT5G63110.1 12445118
AT3G62980.1 KRH63609 AT5G63110.1 12445118
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH68108 Soybean cytosol 96.76 96.93
KRH71533 Soybean cytosol 85.69 85.98
KRH31921 Soybean cytosol 84.84 85.13
VIT_07s0104g01320.t01 Wine grape cytosol 81.26 82.81
Solyc06g008440.1.1 Tomato extracellular 8.69 79.69
PGSC0003DMT400029517 Potato cytosol 78.71 79.52
Solyc09g074520.2.1 Tomato cytosol 78.53 79.35
AT3G62980.1 Thale cress cytosol 78.36 77.44
CDY68868 Canola cytosol 71.21 77.41
CDY11468 Canola cytosol 77.34 76.3
CDY53998 Canola cytosol 75.81 76.2
Bra007720.1-P Field mustard cytosol 77.0 75.97
CDX76680 Canola cytosol 77.0 75.97
Solyc06g008470.1.1 Tomato extracellular 7.33 75.44
PGSC0003DMT400061752 Potato plastid 74.11 75.0
Bra003518.1-P Field mustard cytosol 75.47 74.58
PGSC0003DMT400053430 Potato cytosol 33.39 72.86
PGSC0003DMT400056570 Potato cytosol 72.74 71.89
PGSC0003DMT400093216 Potato mitochondrion 18.23 69.93
Solyc06g008810.2.1 Tomato cytosol 50.09 69.83
GSMUA_Achr5P26930_001 Banana cytosol 55.2 69.83
CDX67912 Canola endoplasmic reticulum, golgi 75.64 68.84
Solyc06g008460.1.1 Tomato extracellular 27.6 68.35
GSMUA_Achr3P23850_001 Banana cytosol 66.44 67.01
PGSC0003DMT400013682 Potato cytosol, mitochondrion 15.84 66.43
Bra014378.1-P Field mustard cytosol 70.36 65.97
CDX89163 Canola cytosol 70.19 65.81
Os05t0150500-00 Rice plastid 61.33 61.33
KXG21312 Sorghum plastid 61.33 60.91
TraesCS1A01G091300.1 Wheat cytosol 61.33 60.81
TraesCS1B01G119100.1 Wheat cytosol, peroxisome, plastid 60.99 60.78
PGSC0003DMT400008765 Potato cytosol 11.07 60.75
Zm00001d010863_P001 Maize plastid 60.99 60.68
KRG94665 Soybean cytosol 58.94 60.49
KRH06858 Soybean cytosol 58.94 60.49
TraesCS1D01G099900.1 Wheat cytosol 61.33 60.0
KRH70053 Soybean cytosol 57.92 59.34
Solyc06g008780.1.1 Tomato extracellular 49.57 58.67
Solyc05g009260.1.1 Tomato extracellular 8.01 58.02
KRH08397 Soybean cytosol 55.88 57.24
HORVU1Hr1G021550.4 Barley cytosol 59.97 54.83
KRH49941 Soybean cytosol 51.96 52.77
KRH41935 Soybean cytosol 51.96 52.68
Solyc06g007840.2.1 Tomato extracellular, plastid 6.98 50.0
Solyc06g007830.1.1 Tomato endoplasmic reticulum, extracellular 9.71 50.0
KRH52925 Soybean cytosol 48.89 48.89
KRH62206 Soybean cytosol 48.38 48.71
KRH72427 Soybean cytosol 49.06 45.71
KRH16819 Soybean cytosol 49.06 45.0
Solyc06g084490.1.1 Tomato plastid 14.31 40.0
KRH73146 Soybean cytosol 32.37 32.53
KRH14993 Soybean cytosol 31.01 32.04
KRG97777 Soybean cytosol 32.2 32.03
KRH31107 Soybean cytosol 32.2 32.03
Protein Annotations
Gene3D:1.20.1280.50EntrezGene:100779021MapMan:11.2.2.1.1MapMan:19.2.2.8.1.4.6Gene3D:3.80.10.10EMBL:ACUP02012154
InterPro:F-box_domEnsemblPlantsGene:GLYMA_19G206800GO:GO:0003674GO:GO:0005488GO:GO:0005515UniProt:I1NB13
InterPro:IPR001810InterPro:IPR032675EnsemblPlants:KRG96377ProteinID:KRG96377ProteinID:KRG96377.1InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt_Cys-con_subtypPFAM:PF12937PANTHER:PTHR43944PANTHER:PTHR43944:SF7SMART:SM00367SUPFAM:SSF52047
UniParc:UPI00023DE329:::::
Description
hypothetical protein
Coordinates
chr19:+:46220015..46223853
Molecular Weight (calculated)
66245.3 Da
IEP (calculated)
5.765
GRAVY (calculated)
-0.021
Length
587 amino acids
Sequence
(BLAST)
001: MQRMAYTFSF PEEVLEHVFS FIWNERDRNA ISLVCKSWYE IERWCRRKVF VGNCYAVSPL MVVKRFPEVR SIALKGKPHF ADFNLVPDGW GGYVCPWIAA
101: MARAFPCLEE IRLKRMVITD ESLELIAKSF KNFKVLVLTS CEGFTTDGLA AIAANCRNLR ELDLQESEVE EDLSGHWLSH FPDSYTSLVS LNISCLNNEV
201: SLSALERLLG RCPNLRTLRL NRAVPLDRLP NLLLQCPQLV ELGTGVYSTE MRPEVFSNLE AAFSGCKQLK SLSGFWDVLP SYLPAVYPIC SRLTSLNLSY
301: AIIQSSDLIK LISQCPNLLR LWVLDYIEDA GLYALAASCK DLRELRVFPS DPFGLEPNVA LTEQGLVSVS EGCPKLQSVL YFCRQMSNAA LHTIARNRTN
401: LTRFRLCIIE PRTPDYLTHE PLDSGFGAIV EQCKDLQRLS LSGLLTDRVF EYIGTCGKKL EMLSVAFAGD SDLGLHHVLS GCDNLRKLEI RDCPFGDKAL
501: LANAEKLETM RSLWMSSCSV SYGACKLLGQ KMPRLNVEVI DERGPPDSRP DDCPVEKLYI YRTIAGPRLD MPGFVWTMED DSSLRLE
Best Arabidopsis Sequence Match ( AT1G12820.1 )
(BLAST)
001: MNYFPDEVIE HVFDFVASHK DRNSISLVCK SWHKIERFSR KEVFIGNCYA INPERLIRRF PCLKSLTLKG KPHFADFNLV PHEWGGFVHP WIEALARSRV
101: GLEELRLKRM VVTDESLDLL SRSFANFKSL VLVSCEGFTT DGLASIAANC RHLRELDLQE NEIDDHRGQW LNCFPDSCTT LMSLNFACLK GETNVAALER
201: LVARSPNLKS LKLNRAVPLD ALARLMSCAP QLVDLGVGSY ENEPDPESFA KLMTAIKKYT SLRSLSGFLE VAPLCLPAFY PICQNLISLN LSYAAEIQGN
301: HLIKLIQLCK RLQRLWILDS IGDKGLAVVA ATCKELQELR VFPSDVHGEE DNNASVTEVG LVAISAGCPK LHSILYFCKQ MTNAALIAVA KNCPNFIRFR
401: LCILEPHKPD HITFQSLDEG FGAIVQACKG LRRLSVSGLL TDQVFLYIGM YAEQLEMLSI AFAGDTDKGM LYVLNGCKKM RKLEIRDSPF GNAALLADVG
501: RYETMRSLWM SSCEVTLGGC KRLAQNSPRL NVEIINENEN NGMEQNEEDE REKVDKLYLY RTVVGTRKDA PPYVRIL
Arabidopsis Description
AFB3Protein AUXIN SIGNALING F-BOX 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPW7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.