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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
KRG92429
KRG96405
KRH34377
KRH68142

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT1G12820.1 KRG92429 AT3G23050.1 15992545
AT1G12820.1 KRH34377 AT3G23050.1 15992545
AT1G12820.1 KRG96405 AT4G02570.1 15992545
AT1G12820.1 KRH68142 AT4G02570.1 15992545
AT3G26810.1 KRG92429 AT3G23050.1 15992545
AT3G26810.1 KRH34377 AT3G23050.1 15992545
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH08397 Soybean cytosol 84.47 84.47
KRH06858 Soybean cytosol 80.8 80.94
KRG94665 Soybean cytosol 80.8 80.94
VIT_14s0068g01330.t01 Wine grape cytosol 75.74 75.87
AT3G26810.1 Thale cress cytosol 73.82 73.57
AT1G12820.1 Thale cress cytosol 73.82 73.31
CDY28523 Canola cytosol 72.77 72.52
Bra032954.1-P Field mustard cytosol 72.6 72.35
CDY34211 Canola cytosol 72.43 72.17
CDY16034 Canola cytosol 72.08 71.33
Bra026953.1-P Field mustard cytosol 71.73 71.11
CDX71968 Canola cytosol 71.55 70.93
CDY26594 Canola cytosol 71.38 70.76
GSMUA_AchrUn_... Banana cytosol 65.62 70.54
CDY31282 Canola cytosol 71.38 69.68
Bra016754.1-P Field mustard cytosol 71.73 69.66
GSMUA_Achr10P... Banana cytosol 64.75 69.61
CDY21068 Canola cytosol 71.55 69.49
GSMUA_Achr6P16510_001 Banana cytosol 64.57 69.42
GSMUA_Achr6P08000_001 Banana cytosol 64.4 69.23
GSMUA_Achr9P01140_001 Banana cytosol 64.22 69.04
GSMUA_Achr6P20580_001 Banana cytosol 56.72 65.0
HORVU2Hr1G070800.1 Barley cytosol 63.53 63.41
Zm00001d003911_P003 Maize cytosol 63.53 63.3
TraesCS2D01G285000.1 Wheat cytosol 63.35 63.24
TraesCS2B01G302900.1 Wheat cytosol 63.18 63.07
TraesCS2A01G286200.1 Wheat cytosol 63.18 63.07
Os04t0395600-01 Rice cytosol 63.0 62.78
HORVU6Hr1G021040.2 Barley extracellular 15.18 62.14
Zm00001d025268_P001 Maize cytosol 62.13 62.13
KXG26136 Sorghum cytosol 63.87 61.72
Os11t0515500-01 Rice cytosol 59.51 60.04
HORVU5Hr1G075620.2 Barley cytosol 58.64 59.15
TraesCS5D01G288000.1 Wheat cytosol 58.46 58.88
TraesCS5A01G281100.1 Wheat cytosol 58.29 58.7
KRH68108 Soybean cytosol 59.86 58.53
TraesCS5B01G280100.1 Wheat cytosol 58.29 58.39
KRG96377 Soybean cytosol 59.34 57.92
KRH31921 Soybean cytosol 58.12 56.92
KRH71533 Soybean cytosol 57.94 56.75
EES09791 Sorghum cytosol 57.24 56.75
Zm00001d007357_P005 Maize cytosol 56.02 56.02
KRH49941 Soybean cytosol 51.48 51.04
KRH41935 Soybean cytosol 51.31 50.78
KRH62206 Soybean cytosol 49.91 49.06
KRH52925 Soybean cytosol 49.56 48.38
KRH72427 Soybean cytosol 50.09 45.56
KRH16819 Soybean cytosol 49.91 44.69
KRH14993 Soybean cytosol 31.24 31.51
KRH73146 Soybean cytosol 31.59 30.99
KRH31107 Soybean cytosol 31.59 30.68
KRG97777 Soybean cytosol 31.41 30.51
Protein Annotations
Gene3D:1.20.1280.50EntrezGene:100788040MapMan:11.2.2.1.1MapMan:19.2.2.8.1.4.6Gene3D:3.80.10.10EMBL:ACUP02000745
InterPro:F-box_domEnsemblPlantsGene:GLYMA_02G065300GO:GO:0003674GO:GO:0005488GO:GO:0005515UniProt:I1JCY8
InterPro:IPR001810InterPro:IPR032675EnsemblPlants:KRH70053ProteinID:KRH70053ProteinID:KRH70053.1InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt_Cys-con_subtypPFAM:PF12937PANTHER:PTHR43944PANTHER:PTHR43944:SF9SMART:SM00367SUPFAM:SSF52047
UniParc:UPI0002336EFB:::::
Description
hypothetical protein
Coordinates
chr2:-:5811685..5815085
Molecular Weight (calculated)
64554.0 Da
IEP (calculated)
8.175
GRAVY (calculated)
-0.014
Length
573 amino acids
Sequence
(BLAST)
001: MNFFPDEVIE HIFDYVTSQR DRNDLSLVCK NWHRLERCSR KSLFIGNCYS ISPERVIERF PELKSLTLKG KPHFADFNLV PHGWGGFVSP WIEAMVKSRV
101: DLEELRLKRM VVTDKSLELL SRSFMNFKSL VLVSCEGFTT DGLAAIAANC RFLKELDLQE NEVDDHRGQW LSCFPDCCTS LVSLNFACLK GQINLGALER
201: LVARSPNLKS LRLNHTVPLN ALQRILRRAP QIVDLGIGSF IPDPNSNVFI KLMNTIIECK SITSLSGFFE VTPRCLPAIY PVCMNLTAMN LSYAAGIQSR
301: ELIKLICRCG KLQRLWIMDC IGDFGLHVVA STCKDLQELR VFPSVRVGRN DPAGVTEKGL VAISMGCPKL HSLLYFCQQM TNAALITVAK NCPNFIRFRL
401: CILDPTKPDP DTVQPLDEGF GAIVQSCKQL RRLSLSGQLT DQVFLYIGVY AEQLEMLSIA FAGESDKAML YVLNGCKKLR KLEIRDSPFG DSALLMDVGK
501: YETMRSLWMS SCDVTIGACK ALAKKMPGLN VEIFNGNEKV DRDVDDGQKV EKTYLYRTLV GRRKDAPEHV WTL
Best Arabidopsis Sequence Match ( AT1G12820.1 )
(BLAST)
001: MNYFPDEVIE HVFDFVASHK DRNSISLVCK SWHKIERFSR KEVFIGNCYA INPERLIRRF PCLKSLTLKG KPHFADFNLV PHEWGGFVHP WIEALARSRV
101: GLEELRLKRM VVTDESLDLL SRSFANFKSL VLVSCEGFTT DGLASIAANC RHLRELDLQE NEIDDHRGQW LNCFPDSCTT LMSLNFACLK GETNVAALER
201: LVARSPNLKS LKLNRAVPLD ALARLMSCAP QLVDLGVGSY ENEPDPESFA KLMTAIKKYT SLRSLSGFLE VAPLCLPAFY PICQNLISLN LSYAAEIQGN
301: HLIKLIQLCK RLQRLWILDS IGDKGLAVVA ATCKELQELR VFPSDVHGEE DNNASVTEVG LVAISAGCPK LHSILYFCKQ MTNAALIAVA KNCPNFIRFR
401: LCILEPHKPD HITFQSLDEG FGAIVQACKG LRRLSVSGLL TDQVFLYIGM YAEQLEMLSI AFAGDTDKGM LYVLNGCKKM RKLEIRDSPF GNAALLADVG
501: RYETMRSLWM SSCEVTLGGC KRLAQNSPRL NVEIINENEN NGMEQNEEDE REKVDKLYLY RTVVGTRKDA PPYVRIL
Arabidopsis Description
AFB3Protein AUXIN SIGNALING F-BOX 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9LPW7]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.