Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra032954.1-P | Field mustard | cytosol | 92.87 | 92.87 |
| CDY34211 | Canola | cytosol | 92.7 | 92.7 |
| CDY28523 | Canola | cytosol | 92.35 | 92.35 |
| AT1G12820.1 | Thale cress | cytosol | 86.43 | 86.14 |
| VIT_14s0068g01330.t01 | Wine grape | cytosol | 77.04 | 77.45 |
| KRG94665 | Soybean | cytosol | 75.83 | 76.22 |
| KRH06858 | Soybean | cytosol | 74.78 | 75.17 |
| KRH70053 | Soybean | cytosol | 73.57 | 73.82 |
| GSMUA_AchrUn_... | Banana | cytosol | 66.61 | 71.86 |
| GSMUA_Achr6P08000_001 | Banana | cytosol | 65.74 | 70.92 |
| KRH08397 | Soybean | cytosol | 70.26 | 70.51 |
| GSMUA_Achr10P... | Banana | cytosol | 65.22 | 70.36 |
| GSMUA_Achr6P16510_001 | Banana | cytosol | 65.04 | 70.17 |
| GSMUA_Achr9P01140_001 | Banana | cytosol | 64.7 | 69.79 |
| Os04t0395600-01 | Rice | cytosol | 66.61 | 66.61 |
| HORVU2Hr1G070800.1 | Barley | cytosol | 66.26 | 66.38 |
| TraesCS2D01G285000.1 | Wheat | cytosol | 66.26 | 66.38 |
| Zm00001d003911_P003 | Maize | cytosol | 66.26 | 66.26 |
| TraesCS2A01G286200.1 | Wheat | cytosol | 66.09 | 66.2 |
| TraesCS2B01G302900.1 | Wheat | cytosol | 65.91 | 66.03 |
| GSMUA_Achr6P20580_001 | Banana | cytosol | 56.7 | 65.2 |
| Zm00001d025268_P001 | Maize | cytosol | 64.87 | 65.1 |
| KXG26136 | Sorghum | cytosol | 66.96 | 64.92 |
| HORVU6Hr1G021040.2 | Barley | extracellular | 14.96 | 61.43 |
| TraesCS5D01G288000.1 | Wheat | cytosol | 58.96 | 59.58 |
| HORVU5Hr1G075620.2 | Barley | cytosol | 58.78 | 59.51 |
| TraesCS5B01G280100.1 | Wheat | cytosol | 59.13 | 59.44 |
| Os11t0515500-01 | Rice | cytosol | 58.61 | 59.33 |
| EES09791 | Sorghum | cytosol | 59.48 | 59.17 |
| TraesCS5A01G281100.1 | Wheat | cytosol | 58.43 | 59.05 |
| AT3G62980.1 | Thale cress | cytosol | 60.35 | 58.42 |
| Zm00001d007357_P005 | Maize | cytosol | 57.74 | 57.94 |
| AT4G03190.1 | Thale cress | cytosol, plastid | 55.48 | 54.53 |
| AT5G49980.1 | Thale cress | nucleus | 51.3 | 47.66 |
| AT4G24390.1 | Thale cress | cytosol, plastid | 50.26 | 46.39 |
| AT2G39940.1 | Thale cress | cytosol | 30.96 | 30.07 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:11.2.2.1.1 | MapMan:19.2.2.8.1.4.6 | Gene3D:3.80.10.10 | EntrezGene:822296 | UniProt:A0A178VGF7 |
| ProteinID:AEE77218.1 | Symbol:AFB2 | ArrayExpress:AT3G26810 | EnsemblPlantsGene:AT3G26810 | RefSeq:AT3G26810 | TAIR:AT3G26810 |
| RefSeq:AT3G26810-TAIR-G | EnsemblPlants:AT3G26810.1 | TAIR:AT3G26810.1 | EMBL:AY062568 | ProteinID:BAB01228.1 | EMBL:BT010396 |
| InterPro:F-box_dom | GO:GO:0000003 | GO:GO:0000822 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005773 |
| GO:GO:0005774 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009791 |
| GO:GO:0009908 | GO:GO:0009987 | GO:GO:0010011 | GO:GO:0010152 | GO:GO:0016020 | GO:GO:0016567 |
| GO:GO:0019005 | GO:GO:0019538 | GO:GO:0048443 | InterPro:IPR001810 | InterPro:IPR032675 | InterPro:LRR_dom_sf |
| InterPro:Leu-rich_rpt_Cys-con_subtyp | RefSeq:NP_566800.1 | ProteinID:OAP04834.1 | PFAM:PF00646 | PO:PO:0000005 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0009066 | PO:PO:0009067 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR43944 | PANTHER:PTHR43944:SF9 | UniProt:Q9LW29 |
| SMART:SM00256 | SMART:SM00367 | SUPFAM:SSF52047 | UniParc:UPI00000A0390 | SEG:seg | : |
Description
AFB2AFB2 [Source:UniProtKB/TrEMBL;Acc:A0A178VGF7]
Coordinates
chr3:+:9867652..9870782
Molecular Weight (calculated)
64608.6 Da
IEP (calculated)
7.398
GRAVY (calculated)
-0.032
Length
575 amino acids
Sequence
(BLAST)
(BLAST)
001: MNYFPDEVIE HVFDFVTSHK DRNAISLVCK SWYKIERYSR QKVFIGNCYA INPERLLRRF PCLKSLTLKG KPHFADFNLV PHEWGGFVLP WIEALARSRV
101: GLEELRLKRM VVTDESLELL SRSFVNFKSL VLVSCEGFTT DGLASIAANC RHLRDLDLQE NEIDDHRGQW LSCFPDTCTT LVTLNFACLE GETNLVALER
201: LVARSPNLKS LKLNRAVPLD ALARLMACAP QIVDLGVGSY ENDPDSESYL KLMAVIKKCT SLRSLSGFLE AAPHCLSAFH PICHNLTSLN LSYAAEIHGS
301: HLIKLIQHCK KLQRLWILDS IGDKGLEVVA STCKELQELR VFPSDLLGGG NTAVTEEGLV AISAGCPKLH SILYFCQQMT NAALVTVAKN CPNFIRFRLC
401: ILEPNKPDHV TSQPLDEGFG AIVKACKSLR RLSLSGLLTD QVFLYIGMYA NQLEMLSIAF AGDTDKGMLY VLNGCKKMKK LEIRDSPFGD TALLADVSKY
501: ETMRSLWMSS CEVTLSGCKR LAEKAPWLNV EIINENDNNR MEENGHEGRQ KVDKLYLYRT VVGTRMDAPP FVWIL
101: GLEELRLKRM VVTDESLELL SRSFVNFKSL VLVSCEGFTT DGLASIAANC RHLRDLDLQE NEIDDHRGQW LSCFPDTCTT LVTLNFACLE GETNLVALER
201: LVARSPNLKS LKLNRAVPLD ALARLMACAP QIVDLGVGSY ENDPDSESYL KLMAVIKKCT SLRSLSGFLE AAPHCLSAFH PICHNLTSLN LSYAAEIHGS
301: HLIKLIQHCK KLQRLWILDS IGDKGLEVVA STCKELQELR VFPSDLLGGG NTAVTEEGLV AISAGCPKLH SILYFCQQMT NAALVTVAKN CPNFIRFRLC
401: ILEPNKPDHV TSQPLDEGFG AIVKACKSLR RLSLSGLLTD QVFLYIGMYA NQLEMLSIAF AGDTDKGMLY VLNGCKKMKK LEIRDSPFGD TALLADVSKY
501: ETMRSLWMSS CEVTLSGCKR LAEKAPWLNV EIINENDNNR MEENGHEGRQ KVDKLYLYRT VVGTRMDAPP FVWIL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.