Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra000156.1-P | Field mustard | cytosol | 89.36 | 89.66 |
| CDY24941 | Canola | cytosol | 88.85 | 89.15 |
| Bra005000.1-P | Field mustard | cytosol | 90.37 | 88.72 |
| CDX74819 | Canola | cytosol | 89.86 | 88.67 |
| CDY20501 | Canola | cytosol | 89.86 | 88.37 |
| CDX93223 | Canola | cytosol | 79.56 | 79.7 |
| CDY07041 | Canola | cytosol | 78.38 | 78.38 |
| CDX93225 | Canola | cytosol | 78.21 | 77.95 |
| Bra017044.1-P | Field mustard | cytosol | 79.05 | 77.48 |
| Bra017045.1-P | Field mustard | cytosol | 77.2 | 75.29 |
| CDY60996 | Canola | endoplasmic reticulum, golgi | 89.19 | 75.11 |
| CDY07040 | Canola | cytosol | 76.86 | 74.96 |
| KRH31107 | Soybean | cytosol | 69.59 | 69.83 |
| VIT_13s0019g03380.t01 | Wine grape | cytosol | 69.93 | 69.23 |
| KRG97777 | Soybean | cytosol | 68.92 | 69.15 |
| KRH14993 | Soybean | cytosol | 66.22 | 69.01 |
| KRH73146 | Soybean | cytosol | 67.74 | 68.66 |
| Solyc05g052620.2.1 | Tomato | cytosol | 68.58 | 67.33 |
| GSMUA_Achr6P33630_001 | Banana | cytosol, mitochondrion, nucleus | 62.67 | 63.64 |
| GSMUA_Achr5P28930_001 | Banana | cytosol | 60.14 | 63.57 |
| GSMUA_Achr9P03690_001 | Banana | cytosol | 62.84 | 61.69 |
| HORVU4Hr1G060950.3 | Barley | cytosol | 56.25 | 56.83 |
| Os05t0449500-01 | Rice | cytosol | 57.09 | 56.62 |
| TraesCS4B01G213500.1 | Wheat | cytosol | 55.74 | 56.31 |
| TraesCS4A01G091200.1 | Wheat | cytosol | 55.57 | 56.14 |
| TraesCS4D01G214200.1 | Wheat | cytosol | 55.57 | 56.14 |
| Os01t0853400-01 | Rice | cytosol | 56.42 | 56.13 |
| TraesCS3A01G367500.1 | Wheat | cytosol | 52.7 | 56.01 |
| Zm00001d042833_P001 | Maize | cytosol | 56.42 | 55.85 |
| EES18318 | Sorghum | cytosol | 56.42 | 55.76 |
| Zm00001d012338_P001 | Maize | cytosol | 56.08 | 55.7 |
| TraesCS3B01G399200.1 | Wheat | cytosol | 55.74 | 55.56 |
| HORVU3Hr1G085210.2 | Barley | cytosol | 55.74 | 55.56 |
| TraesCS3D01G360400.2 | Wheat | cytosol | 55.74 | 55.46 |
| Zm00001d038273_P001 | Maize | cytosol | 56.08 | 55.43 |
| Zm00001d010082_P001 | Maize | cytosol | 56.08 | 55.43 |
| HORVU1Hr1G073230.1 | Barley | cytosol | 55.24 | 55.33 |
| Os03t0265500-01 | Rice | plasma membrane | 54.56 | 54.84 |
| TraesCS1B01G288100.1 | Wheat | cytosol | 54.73 | 54.73 |
| TraesCS1D01G278400.1 | Wheat | cytosol | 54.73 | 54.73 |
| EES01769 | Sorghum | cytosol | 55.07 | 54.7 |
| GSMUA_Achr8P02350_001 | Banana | cytosol | 15.88 | 54.65 |
| TraesCS1A01G279100.1 | Wheat | cytosol | 54.56 | 54.56 |
| EER95129 | Sorghum | cytosol | 54.05 | 54.15 |
| Zm00001d028543_P001 | Maize | cytosol | 53.72 | 53.81 |
| Zm00001d047848_P001 | Maize | cytosol | 53.21 | 53.3 |
| AT1G12820.1 | Thale cress | cytosol | 31.08 | 31.89 |
| AT3G26810.1 | Thale cress | cytosol | 30.07 | 30.96 |
| AT3G62980.1 | Thale cress | cytosol | 30.91 | 30.81 |
| AT4G03190.1 | Thale cress | cytosol, plastid | 29.9 | 30.26 |
| AT5G49980.1 | Thale cress | nucleus | 30.91 | 29.56 |
| AT4G24390.1 | Thale cress | cytosol, plastid | 30.74 | 29.21 |
Protein Annotations
| Gene3D:1.20.1280.50 | MapMan:11.7.2.1.1 | Gene3D:3.80.10.10 | PDB:3OGK | PDB:3OGL | PDB:3OGM |
| EntrezGene:818581 | UniProt:A0A178VMU2 | ProteinID:AAB95279.1 | ProteinID:ABR45936.1 | ProteinID:ABR45937.1 | ProteinID:ABR45938.1 |
| ProteinID:ABR45939.1 | ProteinID:ABR45940.1 | ProteinID:ABR45941.1 | ProteinID:ABR45942.1 | ProteinID:ABR45943.1 | ProteinID:ABR45944.1 |
| ProteinID:ABR45945.1 | ProteinID:ABR45946.1 | ProteinID:ABR45947.1 | ProteinID:ABR45949.1 | ProteinID:ABR45950.1 | ProteinID:ABR45951.1 |
| ProteinID:ABR45952.1 | ProteinID:ABR45953.1 | ProteinID:ABR45954.1 | ProteinID:AEC09753.1 | EMBL:AF036340 | ArrayExpress:AT2G39940 |
| EnsemblPlantsGene:AT2G39940 | RefSeq:AT2G39940 | TAIR:AT2G39940 | RefSeq:AT2G39940-TAIR-G | EnsemblPlants:AT2G39940.1 | TAIR:AT2G39940.1 |
| EMBL:AY045625 | EMBL:AY133556 | Unigene:At.71018 | Symbol:COI1 | GO:GO:0000003 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009605 |
| GO:GO:0009607 | GO:GO:0009611 | GO:GO:0009625 | GO:GO:0009628 | GO:GO:0009641 | GO:GO:0009719 |
| GO:GO:0009753 | GO:GO:0009791 | GO:GO:0009861 | GO:GO:0009867 | GO:GO:0009901 | GO:GO:0009908 |
| GO:GO:0009909 | GO:GO:0009987 | GO:GO:0010118 | GO:GO:0010218 | GO:GO:0016567 | GO:GO:0019538 |
| GO:GO:0031146 | GO:GO:0031348 | GO:GO:0042742 | GO:GO:0048364 | GO:GO:0048443 | GO:GO:0050832 |
| InterPro:IPR032675 | InterPro:LRR_dom_sf | RefSeq:NP_565919.1 | UniProt:O04197 | ProteinID:OAP07687.1 | PO:PO:0000013 |
| PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR43944 |
| PANTHER:PTHR43944:SF6 | SUPFAM:SSF52047 | UniParc:UPI0000034BB6 | SEG:seg | : | : |
Description
COI1Coronatine-insensitive protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O04197]
Coordinates
chr2:-:16672493..16675864
Molecular Weight (calculated)
67669.2 Da
IEP (calculated)
6.338
GRAVY (calculated)
-0.240
Length
592 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDPDIKRCK LSCVATVDDV IEQVMTYITD PKDRDSASLV CRRWFKIDSE TREHVTMALC YTATPDRLSR RFPNLRSLKL KGKPRAAMFN LIPENWGGYV
101: TPWVTEISNN LRQLKSVHFR RMIVSDLDLD RLAKARADDL ETLKLDKCSG FTTDGLLSIV THCRKIKTLL MEESSFSEKD GKWLHELAQH NTSLEVLNFY
201: MTEFAKISPK DLETIARNCR SLVSVKVGDF EILELVGFFK AAANLEEFCG GSLNEDIGMP EKYMNLVFPR KLCRLGLSYM GPNEMPILFP FAAQIRKLDL
301: LYALLETEDH CTLIQKCPNL EVLETRNVIG DRGLEVLAQY CKQLKRLRIE RGADEQGMED EEGLVSQRGL IALAQGCQEL EYMAVYVSDI TNESLESIGT
401: YLKNLCDFRL VLLDREERIT DLPLDNGVRS LLIGCKKLRR FAFYLRQGGL TDLGLSYIGQ YSPNVRWMLL GYVGESDEGL MEFSRGCPNL QKLEMRGCCF
501: SERAIAAAVT KLPSLRYLWV QGYRASMTGQ DLMQMARPYW NIELIPSRRV PEVNQQGEIR EMEHPAHILA YYSLAGQRTD CPTTVRVLKE PI
101: TPWVTEISNN LRQLKSVHFR RMIVSDLDLD RLAKARADDL ETLKLDKCSG FTTDGLLSIV THCRKIKTLL MEESSFSEKD GKWLHELAQH NTSLEVLNFY
201: MTEFAKISPK DLETIARNCR SLVSVKVGDF EILELVGFFK AAANLEEFCG GSLNEDIGMP EKYMNLVFPR KLCRLGLSYM GPNEMPILFP FAAQIRKLDL
301: LYALLETEDH CTLIQKCPNL EVLETRNVIG DRGLEVLAQY CKQLKRLRIE RGADEQGMED EEGLVSQRGL IALAQGCQEL EYMAVYVSDI TNESLESIGT
401: YLKNLCDFRL VLLDREERIT DLPLDNGVRS LLIGCKKLRR FAFYLRQGGL TDLGLSYIGQ YSPNVRWMLL GYVGESDEGL MEFSRGCPNL QKLEMRGCCF
501: SERAIAAAVT KLPSLRYLWV QGYRASMTGQ DLMQMARPYW NIELIPSRRV PEVNQQGEIR EMEHPAHILA YYSLAGQRTD CPTTVRVLKE PI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.