Factsheet for Os03t0265500-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

plasma membrane: 28056797

msms PMID: 28056797 doi

N Yang, T Wang

Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0853400-01
Os01t0935300-02
Os02t0551100-01
Os03t0197400-01
Os03t0265500-01
Os03t0402800-01
Os04t0428900-01
Os04t0432000-02
Os05t0193900-00
Os05t0449500-01
Os07t0615200-01
Os08t0119000-01
Os08t0344100-01
Os08t0428400-01
Os09t0439200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39940.1	Os03t0402800-01	AT1G19180.1	17637677
AT2G39940.1	Os07t0615200-01	AT1G19180.1	17637677
AT2G39940.1	Os09t0439200-01	AT1G19180.1	17637677
AT2G39940.1	Os03t0402800-01	AT1G19180.1	18547396
AT2G39940.1	Os07t0615200-01	AT1G19180.1	18547396
AT2G39940.1	Os09t0439200-01	AT1G19180.1	18547396
AT2G39940.1	Os03t0402800-01	AT1G74950.1	18547396
AT2G39940.1	Os07t0615200-01	AT1G74950.1	18547396
AT2G39940.1	Os09t0439200-01	AT1G74950.1	18547396
AT2G39940.1	Os01t0853400-01	AT2G39940.1	12724535
AT2G39940.1	Os03t0265500-01	AT2G39940.1	12724535
AT2G39940.1	Os05t0449500-01	AT2G39940.1	12724535
AT2G39940.1	Os08t0428400-01	AT3G17860.1	17637675
AT2G39940.1	Os08t0428400-01	AT3G17860.1	18547396
AT2G39940.1	Os08t0428400-01	AT3G17860.1	19309455
AT2G39940.1	Os01t0935300-02	AT4G02570.1	12172031
AT2G39940.1	Os05t0193900-00	AT4G02570.1	12172031
AT2G39940.1	Os01t0935300-02	AT4G02570.1	12445118
AT2G39940.1	Os05t0193900-00	AT4G02570.1	12445118
AT2G39940.1	Os01t0935300-02	AT4G02570.1	12724535
AT2G39940.1	Os05t0193900-00	AT4G02570.1	12724535
AT2G39940.1	Os04t0428900-01	AT4G14110.1	12724535
AT2G39940.1	Os02t0551100-01	AT5G08590.1	12172031
AT2G39940.1	Os04t0432000-02	AT5G08590.1	12172031
AT2G39940.1	Os02t0551100-01	AT5G08590.1	14749489
AT2G39940.1	Os04t0432000-02	AT5G08590.1	14749489
AT2G39940.1	Os08t0119000-01	AT5G14250.1	12724535
AT2G39940.1	Os03t0197400-01	AT5G42970.1	12724535
AT2G39940.1	Os08t0344100-01	AT5G63110.1	12445118

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G214200.1	Wheat	cytosol	87.1	87.54
TraesCS4A01G091200.1	Wheat	cytosol	86.25	86.69
HORVU4Hr1G060950.3	Barley	cytosol	85.74	86.18
TraesCS4B01G213500.1	Wheat	cytosol	85.57	86.01
EER95129	Sorghum	cytosol	84.55	84.26
Zm00001d028543_P001	Maize	cytosol	83.7	83.42
Zm00001d047848_P001	Maize	cytosol	83.36	83.08
GSMUA_Achr5P28930_001	Banana	cytosol	65.2	68.57
GSMUA_Achr6P33630_001	Banana	cytosol, mitochondrion, nucleus	67.06	67.75
GSMUA_Achr9P03690_001	Banana	cytosol	66.55	65.01
Os05t0449500-01	Rice	cytosol	64.01	63.15
Os01t0853400-01	Rice	cytosol	63.33	62.69
VIT_13s0019g03380.t01	Wine grape	cytosol	60.1	59.2
KRH14993	Soybean	cytosol	57.05	59.15
GSMUA_Achr8P02350_001	Banana	cytosol	17.15	58.72
KRH73146	Soybean	cytosol	58.06	58.56
KRG97777	Soybean	cytosol	58.06	57.97
KRH31107	Soybean	cytosol	58.06	57.97
Solyc05g052620.2.1	Tomato	cytosol	57.05	55.72
CDY24941	Canola	cytosol	55.01	54.92
Bra000156.1-P	Field mustard	cytosol	54.84	54.75
AT2G39940.1	Thale cress	cytosol	54.84	54.56
CDY20501	Canola	cytosol	54.5	53.32
Bra005000.1-P	Field mustard	cytosol	54.33	53.07
CDX74819	Canola	cytosol	53.99	53.0
CDX93223	Canola	cytosol	52.29	52.12
CDY07041	Canola	cytosol	51.95	51.69
CDX93225	Canola	cytosol	52.12	51.68
Bra017045.1-P	Field mustard	cytosol	52.97	51.4
CDY07040	Canola	cytosol	52.97	51.4
Bra017044.1-P	Field mustard	cytosol	51.95	50.66
CDY60996	Canola	endoplasmic reticulum, golgi	54.67	45.8
Os03t0187500-01	Rice	cytosol	14.43	33.73
Os04t0395600-01	Rice	cytosol	29.54	30.26
Os11t0515500-01	Rice	cytosol	28.35	29.4
Os05t0150500-00	Rice	plastid	29.2	29.3
Os02t0759700-01	Rice	cytosol	30.73	28.41

Protein Annotations

Gene3D:1.20.1280.50	MapMan:11.7.2.1.1	Gene3D:3.80.10.10	EntrezGene:4332349	ProteinID:AAP06838.1	ProteinID:ABF95134.1
EMBL:AK066392	EMBL:AK100694	ProteinID:BAF11563.1	ProteinID:BAS83403.1	ProteinID:EAZ26365.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0006950	GO:GO:0006952	GO:GO:0008150	InterPro:IPR032675
InterPro:LRR_dom_sf	EnsemblPlantsGene:Os03g0265500	EnsemblPlants:Os03t0265500-01	PANTHER:PTHR43944	PANTHER:PTHR43944:SF2	UniProt:Q84QA7
SUPFAM:SSF52047	UniParc:UPI000018DBEC	RefSeq:XP_015632448.1	RefSeq:XP_015632449.1	RefSeq:XP_015632450.1	RefSeq:XP_015632451.1
SEG:seg	:	:	:	:	:

Description

coronatine insensitive 2COI1 homolog, Jasmonate signaling (Os03t0265500-01);Similar to Coronatine-insensitive 1. (Os03t0265500-02)

Coordinates

chr3:+:8761804..8766894

Molecular Weight (calculated)

66269.2 Da

IEP (calculated)

6.207

GRAVY (calculated)

-0.044

Length

589 amino acids

Sequence
(BLAST)

001: MGGEAGERRL GRAMSFGIPD VALGLVMGFV EDPWDRDAIS LVCRHWCRVD ALSRKHVTVA MAYSTTPDRL FRRFPCLESL KLKAKPRAAM FNLIPEDWGG
101: SASPWIRQLS ASFHFLKALH LRRMIVSDDD LDVLVRAKAH MLSSFKLDRC SGFSTSSLAL VARTCKKLET LFLEDSIIAE KENDEWIREL ATNNSVLETL
201: NFFLTDLRAS PAYLTLLVRN CRRLKVLKIS ECFMLDLVDL FRTAEILQDF AGGSFDDQGQ VEESRNYENY YFPPSLLRLS LLYMGTKEMQ VLFPYGAALK
301: KLDLQFTFLS TEDHCQLVQR CPNLEILEVR DVIGDRGLEV VAQTCKKLQR LRVERGDDDQ GGLEDEHGMV TQVGLMAVAQ GCPHLEYWAV HVTDITNAAL
401: EAIGTYSSSL NDFRLVLLDR EANITESPLD NGVRALLRGC TKLRRFAFYV RPGALSDVGL GYIGEFSKTI RYMLLGNVGE SDQGLLQLST GCPSLQKLEL
501: RGCFFSERAL AVAVLQLKSL RYLWVQGYKA SPNGTDLMAM VRPFWNIEII APNQDEVCPD GQAQILAYYS LAGMRSDYPH SVIPLYPSV

Best Arabidopsis Sequence Match ( AT2G39940.1 )
(BLAST)

001: MEDPDIKRCK LSCVATVDDV IEQVMTYITD PKDRDSASLV CRRWFKIDSE TREHVTMALC YTATPDRLSR RFPNLRSLKL KGKPRAAMFN LIPENWGGYV
101: TPWVTEISNN LRQLKSVHFR RMIVSDLDLD RLAKARADDL ETLKLDKCSG FTTDGLLSIV THCRKIKTLL MEESSFSEKD GKWLHELAQH NTSLEVLNFY
201: MTEFAKISPK DLETIARNCR SLVSVKVGDF EILELVGFFK AAANLEEFCG GSLNEDIGMP EKYMNLVFPR KLCRLGLSYM GPNEMPILFP FAAQIRKLDL
301: LYALLETEDH CTLIQKCPNL EVLETRNVIG DRGLEVLAQY CKQLKRLRIE RGADEQGMED EEGLVSQRGL IALAQGCQEL EYMAVYVSDI TNESLESIGT
401: YLKNLCDFRL VLLDREERIT DLPLDNGVRS LLIGCKKLRR FAFYLRQGGL TDLGLSYIGQ YSPNVRWMLL GYVGESDEGL MEFSRGCPNL QKLEMRGCCF
501: SERAIAAAVT KLPSLRYLWV QGYRASMTGQ DLMQMARPYW NIELIPSRRV PEVNQQGEIR EMEHPAHILA YYSLAGQRTD CPTTVRVLKE PI

Arabidopsis Description

COI1Coronatine-insensitive protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O04197]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.