Factsheet for GSMUA_Achr6P33630_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

nucleus 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr10P...
GSMUA_Achr11P...
GSMUA_Achr11P...
GSMUA_Achr1P21870_001
GSMUA_Achr2P06520_001
GSMUA_Achr2P20500_001
GSMUA_Achr2P21770_001
GSMUA_Achr3P02140_001
GSMUA_Achr3P05920_001
GSMUA_Achr3P10270_001
GSMUA_Achr5P05170_001
GSMUA_Achr5P05900_001
GSMUA_Achr5P22110_001
GSMUA_Achr5P28930_001
GSMUA_Achr6P31050_001
GSMUA_Achr6P33630_001
GSMUA_Achr7P12530_001
GSMUA_Achr7P19850_001
GSMUA_Achr8P02350_001
GSMUA_Achr8P16780_001
GSMUA_Achr8P31220_001
GSMUA_Achr9P03690_001
GSMUA_Achr9P14370_001
GSMUA_Achr9P15630_001
GSMUA_Achr9P17620_001
GSMUA_Achr9P19410_001
GSMUA_AchrUn_...
GSMUA_AchrUn_...
GSMUA_AchrUn_...

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G39940.1	GSMUA_Achr10P...	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr11P...	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr1P21870_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr2P21770_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr3P02140_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr3P05920_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr3P10270_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr5P05170_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr5P22110_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr6P31050_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr7P19850_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr8P16780_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr9P14370_001	AT1G19180.1	17637677
AT2G39940.1	GSMUA_AchrUn_...	AT1G19180.1	17637677
AT2G39940.1	GSMUA_Achr10P...	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr11P...	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr1P21870_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr2P21770_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr3P02140_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr3P05920_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr3P10270_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr5P05170_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr5P22110_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr6P31050_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr7P19850_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr8P16780_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr9P14370_001	AT1G19180.1	18547396
AT2G39940.1	GSMUA_AchrUn_...	AT1G19180.1	18547396
AT2G39940.1	GSMUA_Achr10P...	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr11P...	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr1P21870_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr2P21770_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr3P02140_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr3P05920_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr3P10270_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr5P05170_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr5P22110_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr6P31050_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr7P19850_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr8P16780_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr9P14370_001	AT1G74950.1	18547396
AT2G39940.1	GSMUA_AchrUn_...	AT1G74950.1	18547396
AT2G39940.1	GSMUA_Achr5P28930_001	AT2G39940.1	12724535
AT2G39940.1	GSMUA_Achr6P33630_001	AT2G39940.1	12724535
AT2G39940.1	GSMUA_Achr8P02350_001	AT2G39940.1	12724535
AT2G39940.1	GSMUA_Achr9P03690_001	AT2G39940.1	12724535
AT2G39940.1	GSMUA_Achr5P05900_001	AT3G17860.1	17637675
AT2G39940.1	GSMUA_Achr7P12530_001	AT3G17860.1	17637675
AT2G39940.1	GSMUA_Achr9P15630_001	AT3G17860.1	17637675
AT2G39940.1	GSMUA_Achr5P05900_001	AT3G17860.1	18547396
AT2G39940.1	GSMUA_Achr7P12530_001	AT3G17860.1	18547396
AT2G39940.1	GSMUA_Achr9P15630_001	AT3G17860.1	18547396
AT2G39940.1	GSMUA_Achr5P05900_001	AT3G17860.1	19309455
AT2G39940.1	GSMUA_Achr7P12530_001	AT3G17860.1	19309455
AT2G39940.1	GSMUA_Achr9P15630_001	AT3G17860.1	19309455
AT2G39940.1	GSMUA_Achr9P17620_001	AT4G02570.1	12172031
AT2G39940.1	GSMUA_Achr9P17620_001	AT4G02570.1	12445118
AT2G39940.1	GSMUA_Achr9P17620_001	AT4G02570.1	12724535
AT2G39940.1	GSMUA_Achr2P20500_001	AT4G14110.1	12724535
AT2G39940.1	GSMUA_Achr11P...	AT5G14250.1	12724535
AT2G39940.1	GSMUA_AchrUn_...	AT5G14250.1	12724535
AT2G39940.1	GSMUA_Achr8P31220_001	AT5G42970.1	12724535
AT2G39940.1	GSMUA_Achr9P19410_001	AT5G42970.1	12724535
AT2G39940.1	GSMUA_Achr2P06520_001	AT5G63110.1	12445118
AT2G39940.1	GSMUA_AchrUn_...	AT5G63110.1	12445118

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P03690_001	Banana	cytosol	90.05	87.06
GSMUA_Achr5P28930_001	Banana	cytosol	77.19	80.36
VIT_13s0019g03380.t01	Wine grape	cytosol	70.5	68.73
Os05t0449500-01	Rice	cytosol	70.33	68.68
HORVU4Hr1G060950.3	Barley	cytosol	68.78	68.43
GSMUA_Achr8P02350_001	Banana	cytosol	20.07	68.02
TraesCS4D01G214200.1	Wheat	cytosol	68.1	67.75
TraesCS4A01G091200.1	Wheat	cytosol	67.92	67.58
TraesCS4B01G213500.1	Wheat	cytosol	67.58	67.24
Os03t0265500-01	Rice	plasma membrane	67.75	67.06
TraesCS3B01G399200.1	Wheat	cytosol	68.27	67.0
TraesCS3A01G367500.1	Wheat	cytosol	63.98	66.97
Os01t0853400-01	Rice	cytosol	68.27	66.89
TraesCS3D01G360400.2	Wheat	cytosol	68.1	66.72
EER95129	Sorghum	cytosol	67.58	66.67
Zm00001d028543_P001	Maize	cytosol	67.58	66.67
HORVU3Hr1G085210.2	Barley	cytosol	67.75	66.5
Zm00001d010082_P001	Maize	cytosol	68.1	66.28
Zm00001d012338_P001	Maize	cytosol	67.75	66.28
EES18318	Sorghum	cytosol	67.92	66.11
Zm00001d038273_P001	Maize	cytosol	67.92	66.11
Zm00001d047848_P001	Maize	cytosol	66.9	65.99
Zm00001d042833_P001	Maize	cytosol	67.58	65.89
EES01769	Sorghum	cytosol	67.07	65.6
KRH14993	Soybean	cytosol	63.81	65.49
KRG97777	Soybean	cytosol	66.21	65.42
KRH31107	Soybean	cytosol	66.21	65.42
TraesCS1D01G278400.1	Wheat	cytosol	66.21	65.2
TraesCS1B01G288100.1	Wheat	cytosol	66.04	65.03
KRH73146	Soybean	cytosol	64.84	64.73
TraesCS1A01G279100.1	Wheat	cytosol	65.69	64.7
HORVU1Hr1G073230.1	Barley	cytosol	65.35	64.47
CDY24941	Canola	cytosol	63.98	63.22
Bra000156.1-P	Field mustard	cytosol	63.98	63.22
Solyc05g052620.2.1	Tomato	cytosol	65.18	63.02
AT2G39940.1	Thale cress	cytosol	63.64	62.67
CDY20501	Canola	cytosol	63.29	61.3
Bra005000.1-P	Field mustard	cytosol	63.12	61.03
CDX74819	Canola	cytosol	62.61	60.83
CDX93223	Canola	cytosol	59.35	58.54
CDX93225	Canola	cytosol	59.35	58.25
CDY07041	Canola	cytosol	59.01	58.11
CDY07040	Canola	cytosol	59.86	57.5
Bra017045.1-P	Field mustard	cytosol	59.86	57.5
Bra017044.1-P	Field mustard	cytosol	59.18	57.12
CDY60996	Canola	endoplasmic reticulum, golgi	63.81	52.92
GSMUA_AchrUn_...	Banana	cytosol	28.3	30.96
GSMUA_Achr6P16510_001	Banana	cytosol	28.3	30.96
GSMUA_Achr6P08000_001	Banana	cytosol	28.13	30.77
GSMUA_Achr10P...	Banana	cytosol	28.13	30.77
GSMUA_Achr9P01140_001	Banana	cytosol	28.13	30.77
GSMUA_Achr3P23850_001	Banana	cytosol	29.16	29.21
GSMUA_Achr7P11780_001	Banana	cytosol	28.13	27.8
GSMUA_Achr6P20580_001	Banana	cytosol	23.5	27.4
GSMUA_Achr3P06710_001	Banana	cytosol	26.93	27.4
GSMUA_Achr5P26930_001	Banana	cytosol	21.61	27.16
GSMUA_Achr5P05520_001	Banana	cytosol	27.27	27.09

Protein Annotations

EnsemblPlants:GSMUA_Achr6P33630_001	EnsemblPlants:GSMUA_Achr6T33630_001	EnsemblPlantsGene:GSMUA_Achr6G33630_001	Gene3D:1.20.1280.50	Gene3D:3.80.10.10	InterPro:IPR032675
InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt_Cys-con_subtyp	PANTHER:PTHR43944	PANTHER:PTHR43944:SF3	SMART:SM00367	SUPFAM:SSF52047
UniParc:UPI0002957518	UniProt:M0TCF6	MapMan:11.7.2.1.1	:	:	:

Description

Coronatine-insensitive protein 1 [Source:GMGC_GENE;Acc:GSMUA_Achr6G33630_001]

Coordinates

chr6:-:32596445..32602686

Molecular Weight (calculated)

65840.1 Da

IEP (calculated)

6.801

GRAVY (calculated)

-0.053

Length

583 amino acids

Sequence
(BLAST)

001: MAHRSLSRVM SFGISDSALE FVLGYVDDPR DREAVSLVCK KWYQIDALSR KHVTIAICYS TSPDRLRRRF PNLESLKLKG KPRAAMFNLI PEDWGGYAGP
101: WVREIAEAFK CLKSLHFRRM IVKDEDITVL VKARGHMLES LKLDKCSGFS TDALLLVARS CRCLRTLLLE ESSITENNDK WIHELAVNNS VLETLNFYMT
201: ELRVTPQDLE LLAKNCRCLV SLKISECDIY DLVGFFHFAT ALEEFGGGSF NDQLGEVNTY KKIQFPPRLC CVGLIYMGKN EMSILFPFAA ALKKLDLQYT
301: LLSTEDHCQL IQRCPNLEVL EVRDVIGDRG LEVVAQTCKK LRRLRIERGD DEQGLEDEQA RVSQVGLSTL AQGCLELEYL AVYVSDITNA ALECLGTFSK
401: NLCDFRLVLL DREERITDLP LDNGVRALLR GCTKLRRFAL YLRPGGLSDV GLGYIGELSS NVRWILMGNV GESDRGMMLF SQGCPQLQKL ELRSCCFSER
501: ALAMAALQLP SLRYLWVQGY VASPTGRDLL VMARDFWNIE FIPPKGTEVR TGNIESQAQI LAYYSLAGKR TDCSESVIPL YPA

Best Arabidopsis Sequence Match ( AT2G39940.1 )
(BLAST)

001: MEDPDIKRCK LSCVATVDDV IEQVMTYITD PKDRDSASLV CRRWFKIDSE TREHVTMALC YTATPDRLSR RFPNLRSLKL KGKPRAAMFN LIPENWGGYV
101: TPWVTEISNN LRQLKSVHFR RMIVSDLDLD RLAKARADDL ETLKLDKCSG FTTDGLLSIV THCRKIKTLL MEESSFSEKD GKWLHELAQH NTSLEVLNFY
201: MTEFAKISPK DLETIARNCR SLVSVKVGDF EILELVGFFK AAANLEEFCG GSLNEDIGMP EKYMNLVFPR KLCRLGLSYM GPNEMPILFP FAAQIRKLDL
301: LYALLETEDH CTLIQKCPNL EVLETRNVIG DRGLEVLAQY CKQLKRLRIE RGADEQGMED EEGLVSQRGL IALAQGCQEL EYMAVYVSDI TNESLESIGT
401: YLKNLCDFRL VLLDREERIT DLPLDNGVRS LLIGCKKLRR FAFYLRQGGL TDLGLSYIGQ YSPNVRWMLL GYVGESDEGL MEFSRGCPNL QKLEMRGCCF
501: SERAIAAAVT KLPSLRYLWV QGYRASMTGQ DLMQMARPYW NIELIPSRRV PEVNQQGEIR EMEHPAHILA YYSLAGQRTD CPTTVRVLKE PI

Arabidopsis Description

COI1Coronatine-insensitive protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O04197]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.