Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 5
- plastid 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P02140_001 | Banana | mitochondrion | 45.7 | 48.33 |
| GSMUA_Achr8P16780_001 | Banana | cytosol | 49.32 | 43.08 |
| EER97533 | Sorghum | plastid | 42.53 | 40.0 |
| GSMUA_Achr11P... | Banana | cytosol | 41.63 | 39.66 |
| Zm00001d022139_P001 | Maize | plastid | 41.18 | 39.06 |
| GSMUA_Achr6P31050_001 | Banana | cytosol | 37.56 | 38.97 |
| GSMUA_Achr9P14370_001 | Banana | cytosol | 42.99 | 35.85 |
| Os07t0615200-01 | Rice | mitochondrion | 39.37 | 35.66 |
| Os03t0402800-01 | Rice | plastid | 36.65 | 35.53 |
| TraesCS2D01G176800.1 | Wheat | plastid | 37.1 | 35.5 |
| TraesCS2B01G195600.1 | Wheat | plastid | 37.1 | 35.5 |
| Zm00001d029448_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 36.2 | 35.09 |
| EER92157 | Sorghum | plastid | 36.2 | 35.09 |
| GSMUA_Achr5P22110_001 | Banana | mitochondrion | 38.46 | 34.41 |
| HORVU2Hr1G031310.9 | Barley | cytosol, mitochondrion, plastid | 36.65 | 33.89 |
| Solyc07g042170.2.1 | Tomato | cytosol | 33.03 | 33.8 |
| Bra015880.1-P | Field mustard | cytosol | 37.1 | 33.47 |
| CDY45408 | Canola | cytosol | 37.1 | 33.47 |
| GSMUA_Achr10P... | Banana | cytosol | 24.43 | 33.33 |
| CDY46022 | Canola | nucleus | 36.2 | 33.33 |
| GSMUA_Achr3P05920_001 | Banana | nucleus | 37.56 | 33.07 |
| Bra008172.1-P | Field mustard | nucleus | 35.75 | 32.92 |
| PGSC0003DMT400075155 | Potato | nucleus | 31.67 | 32.56 |
| CDY37269 | Canola | nucleus | 35.29 | 32.5 |
| TraesCS2A01G169300.1 | Wheat | plastid | 33.94 | 32.47 |
| GSMUA_Achr5P05170_001 | Banana | cytosol, mitochondrion, nucleus | 35.29 | 32.37 |
| CDX73127 | Canola | cytosol | 35.75 | 32.24 |
| Zm00001d006860_P001 | Maize | plastid | 38.46 | 31.95 |
| VIT_11s0016g00710.t01 | Wine grape | cytosol, plastid | 38.46 | 31.72 |
| GSMUA_AchrUn_... | Banana | nucleus | 34.84 | 31.17 |
| GSMUA_Achr1P21870_001 | Banana | mitochondrion | 48.87 | 30.59 |
| AT1G74950.1 | Thale cress | cytosol | 34.39 | 30.52 |
| GSMUA_Achr7P19850_001 | Banana | cytosol | 33.03 | 30.17 |
| CDX68156 | Canola | cytosol | 23.98 | 29.28 |
| CDY26697 | Canola | plastid | 33.03 | 28.85 |
| Bra025713.1-P | Field mustard | plastid | 33.03 | 28.74 |
| CDX85865 | Canola | cytosol | 28.96 | 28.57 |
| Solyc12g009220.1.1 | Tomato | nucleus | 32.58 | 28.57 |
| CDX96675 | Canola | plastid | 33.94 | 28.52 |
| AT1G19180.1 | Thale cress | cytosol | 32.58 | 28.46 |
| Bra003778.1-P | Field mustard | cytosol | 28.51 | 28.38 |
| CDY41023 | Canola | plastid | 32.58 | 28.35 |
| GSMUA_Achr3P10270_001 | Banana | cytosol | 28.96 | 28.32 |
| Bra031065.1-P | Field mustard | plastid | 34.39 | 27.84 |
| Bra016520.1-P | Field mustard | plastid | 32.58 | 27.8 |
| CDX83781 | Canola | plastid | 33.03 | 27.65 |
| PGSC0003DMT400007592 | Potato | nucleus | 31.22 | 27.17 |
| GSMUA_Achr7P15650_001 | Banana | plastid | 16.74 | 23.87 |
| CDX73289 | Canola | cytosol | 19.46 | 22.87 |
| GSMUA_Achr8P23800_001 | Banana | cytosol | 18.55 | 22.16 |
| GSMUA_Achr10P... | Banana | cytosol | 17.65 | 22.03 |
| GSMUA_Achr5P22010_001 | Banana | cytosol | 15.84 | 21.34 |
| GSMUA_Achr4P09660_001 | Banana | cytosol | 16.74 | 16.89 |
| GSMUA_Achr8P24590_001 | Banana | nucleus | 16.74 | 16.23 |
| CDX81917 | Canola | plastid | 34.39 | 14.96 |
| CDY21679 | Canola | plastid | 34.84 | 14.13 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr2P21770_001 | EnsemblPlants:GSMUA_Achr2T21770_001 | EnsemblPlantsGene:GSMUA_Achr2G21770_001 | InterPro:CCT_CS | InterPro:IPR010399 | InterPro:Tify_dom |
| PANTHER:PTHR33077 | PANTHER:PTHR33077:SF19 | PFAM:PF06200 | PFAM:PF09425 | PFscan:PS51320 | SEG:seg |
| SMART:SM00979 | UniParc:UPI000296FB4F | UniProt:M0SA18 | MapMan:15.5.45 | : | : |
Description
Putative Protein TIFY 10A [Source:GMGC_GENE;Acc:GSMUA_Achr2G21770_001]
Coordinates
chr2:+:21128715..21130269
Molecular Weight (calculated)
24026.7 Da
IEP (calculated)
10.352
GRAVY (calculated)
-0.495
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: MAARKQGKTN FAVTCSLLSR YIKEKGSVAE LGIEMGQRPE YAAKGKSQAF RPPPTTMSLL PGADGEKEED VSSAGNAMEL FPQRAGFVPS LAAVAEDASK
101: QERNQLTIFY GGKVMVFDNF PAKKAKDLLQ LASKGSSTAQ KSGHLSRTVQ PNLSYLPIAR NASLQRFLEK RKDRISARAP YHVTASPEMV NPVKQEKSGS
201: WLGLGPQFSF PSLSLSSEDT R
101: QERNQLTIFY GGKVMVFDNF PAKKAKDLLQ LASKGSSTAQ KSGHLSRTVQ PNLSYLPIAR NASLQRFLEK RKDRISARAP YHVTASPEMV NPVKQEKSGS
201: WLGLGPQFSF PSLSLSSEDT R
001: MSSSMECSEF VGSRRFTGKK PSFSQTCSRL SQYLKENGSF GDLSLGMACK PDVNGTLGNS RQPTTTMSLF PCEASNMDSM VQDVKPTNLF PRQPSFSSSS
101: SSLPKEDVLK MTQTTRSVKP ESQTAPLTIF YAGQVIVFND FSAEKAKEVI NLASKGTANS LAKNQTDIRS NIATIANQVP HPRKTTTQEP IQSSPTPLTE
201: LPIARRASLH RFLEKRKDRV TSKAPYQLCD PAKASSNPQT TGNMSWLGLA AEI
101: SSLPKEDVLK MTQTTRSVKP ESQTAPLTIF YAGQVIVFND FSAEKAKEVI NLASKGTANS LAKNQTDIRS NIATIANQVP HPRKTTTQEP IQSSPTPLTE
201: LPIARRASLH RFLEKRKDRV TSKAPYQLCD PAKASSNPQT TGNMSWLGLA AEI
Arabidopsis Description
TIFY10ATIFY10A [Source:UniProtKB/TrEMBL;Acc:A0A178W7G1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.