Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | cytosol | 37.3 | 38.98 |
| GSMUA_Achr5P22010_001 | Banana | cytosol | 28.65 | 32.32 |
| GSMUA_Achr7P15650_001 | Banana | plastid | 27.03 | 32.26 |
| AT5G20900.1 | Thale cress | cytosol | 30.81 | 30.48 |
| KRH12644 | Soybean | nucleus | 32.97 | 30.35 |
| CDY16574 | Canola | cytoskeleton, cytosol, nucleus | 31.35 | 29.15 |
| KRH37606 | Soybean | cytosol, nucleus, plastid | 31.89 | 28.64 |
| GSMUA_Achr8P24590_001 | Banana | nucleus | 34.59 | 28.07 |
| GSMUA_Achr4P09660_001 | Banana | cytosol | 31.35 | 26.48 |
| CDX92427 | Canola | cytosol | 28.65 | 26.37 |
| Bra002338.1-P | Field mustard | cytosol | 28.11 | 25.87 |
| Bra020135.1-P | Field mustard | cytosol | 30.81 | 25.79 |
| CDY09086 | Canola | cytosol | 29.19 | 24.43 |
| KRH02523 | Soybean | cytosol | 25.95 | 24.37 |
| KRH19420 | Soybean | nucleus | 27.03 | 24.15 |
| GSMUA_Achr3P02140_001 | Banana | mitochondrion | 22.7 | 20.1 |
| GSMUA_Achr10P... | Banana | cytosol | 16.76 | 19.14 |
| GSMUA_Achr2P21770_001 | Banana | mitochondrion | 22.16 | 18.55 |
| AT3G43440.1 | Thale cress | cytosol | 23.78 | 18.49 |
| GSMUA_Achr3P10270_001 | Banana | cytosol | 21.62 | 17.7 |
| GSMUA_Achr6P31050_001 | Banana | cytosol | 18.92 | 16.43 |
| GSMUA_Achr11P... | Banana | cytosol | 20.54 | 16.38 |
| GSMUA_AchrUn_... | Banana | nucleus | 21.62 | 16.19 |
| GSMUA_Achr3P05920_001 | Banana | nucleus | 21.08 | 15.54 |
| GSMUA_Achr9P14370_001 | Banana | cytosol | 22.16 | 15.47 |
| GSMUA_Achr8P16780_001 | Banana | cytosol | 21.08 | 15.41 |
| GSMUA_Achr7P19850_001 | Banana | cytosol | 19.46 | 14.88 |
| GSMUA_Achr5P05170_001 | Banana | cytosol, mitochondrion, nucleus | 18.92 | 14.52 |
| GSMUA_Achr5P22110_001 | Banana | mitochondrion | 18.38 | 13.77 |
| GSMUA_Achr1P21870_001 | Banana | mitochondrion | 23.78 | 12.46 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P23800_001 | EnsemblPlants:GSMUA_Achr8T23800_001 | EnsemblPlantsGene:GSMUA_Achr8G23800_001 | InterPro:CCT_CS | InterPro:IPR010399 | InterPro:Tify_dom |
| PANTHER:PTHR33077 | PANTHER:PTHR33077:SF5 | PFAM:PF06200 | PFAM:PF09425 | PFscan:PS51320 | SEG:seg |
| SMART:SM00979 | UniParc:UPI000295B409 | UniProt:M0TT33 | MapMan:15.5.45 | : | : |
Description
ZIM motif-containing protein (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr8G23800_001]
Coordinates
chr8:-:28152529..28156180
Molecular Weight (calculated)
19626.4 Da
IEP (calculated)
7.417
GRAVY (calculated)
-0.132
Length
185 amino acids
Sequence
(BLAST)
(BLAST)
001: MADPLVAQIP VESSGEAEAE AEAENTETKS EESNSSRMSR VPMPTMANLF DPTQLTIFYN GAVNVYNGIP SEKAQAIMLI AAAAATAPNK ISPTTSATTA
101: GSTVLTRTLS LQSSSVFVTG AVPHAQIVLS ASSPLCKLQA ELPIARRHSL QCFFEKRRNR LASKAPYASA KPLEGIKMAS EEKLT
101: GSTVLTRTLS LQSSSVFVTG AVPHAQIVLS ASSPLCKLQA ELPIARRHSL QCFFEKRRNR LASKAPYASA KPLEGIKMAS EEKLT
001: MTKVKDEPRA SVEGGCGVAD GDGGAAEIGG TGSVEKSINE VRSTEIQTAE PTVPPNQLTI FFGGSVTVFD GLPSEKVQEI LRIAAKAMET KNSTSISPVS
101: SPALNRAPSF SSTSNVASPA AQPFPIQPIS FCRSTADLPI ARRHSLQRFL EKRRDRLVNK NPYPTSDFKK TDVPTGNVSI KEEFPTA
101: SPALNRAPSF SSTSNVASPA AQPFPIQPIS FCRSTADLPI ARRHSLQRFL EKRRDRLVNK NPYPTSDFKK TDVPTGNVSI KEEFPTA
Arabidopsis Description
TIFY3BProtein TIFY 3B [Source:UniProtKB/Swiss-Prot;Acc:Q9C5K8]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.