Factsheet for AT3G43440.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT5G20900.1	Thale cress	cytosol	24.37	31.02
Zm00001d044708_P001	Maize	cytosol, extracellular, plastid	18.49	29.33
Zm00001d033972_P002	Maize	cytosol, extracellular, plastid	19.33	26.59
Zm00001d002029_P003	Maize	nucleus	23.11	25.46
OQU82468	Sorghum	nucleus	23.11	25.11
TraesCS2B01G534800.1	Wheat	extracellular	19.75	25.0
Os04t0653000-01	Rice	cytosol, nucleus, plastid	21.85	24.07
KRH12644	Soybean	nucleus	20.17	23.88
GSMUA_Achr8P23800_001	Banana	cytosol	18.49	23.78
GSMUA_Achr10P...	Banana	cytosol	17.65	23.73
TraesCS2D01G507200.1	Wheat	nucleus	20.59	23.67
HORVU2Hr1G112360.1	Barley	cytosol, mitochondrion, nucleus	19.75	23.62
TraesCS2A01G506500.1	Wheat	cytosol	19.75	23.38
KRH37606	Soybean	cytosol, nucleus, plastid	19.75	22.82
GSMUA_Achr5P22010_001	Banana	cytosol	15.13	21.95
GSMUA_Achr7P15650_001	Banana	plastid	14.29	21.94
KRH02523	Soybean	cytosol	18.07	21.83
Zm00001d026477_P002	Maize	nucleus	21.01	21.74
Zm00001d021924_P001	Maize	plastid	12.18	21.17
Zm00001d046270_P001	Maize	plastid	12.18	21.17
Zm00001d013855_P002	Maize	plastid	20.17	20.96
GSMUA_Achr4P09660_001	Banana	cytosol	18.91	20.55
GSMUA_Achr8P24590_001	Banana	nucleus	19.33	20.18
KRH19420	Soybean	nucleus	16.39	18.84
AT1G74950.1	Thale cress	cytosol	18.07	17.27
AT1G19180.1	Thale cress	cytosol	16.81	15.81
AT1G72450.1	Thale cress	nucleus	16.39	14.5
AT1G17380.1	Thale cress	nucleus	15.55	13.5

Protein Annotations

MapMan:15.5.45	EntrezGene:823426	ProteinID:AEE77795.1	ArrayExpress:AT3G43440	EnsemblPlantsGene:AT3G43440	RefSeq:AT3G43440
TAIR:AT3G43440	RefSeq:AT3G43440-TAIR-G	EnsemblPlants:AT3G43440.1	TAIR:AT3G43440.1	EMBL:BT015154	EMBL:BT015661
ProteinID:CAB81784.1	InterPro:CCT_CS	GO:GO:0003674	GO:GO:0003714	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0006139	GO:GO:0006351
GO:GO:0006355	GO:GO:0006950	GO:GO:0006952	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009611	GO:GO:0009719	GO:GO:0009987	GO:GO:0031347
GO:GO:1903507	GO:GO:2000022	InterPro:IPR010399	Symbol:JAZ11	RefSeq:NP_189930.1	PFAM:PF06200
PFAM:PF09425	PO:PO:0000293	PFscan:PS51320	PANTHER:PTHR33077	PANTHER:PTHR33077:SF5	UniProt:Q9M246
SMART:SM00979	InterPro:Tify_dom	UniParc:UPI00000A6F82	:	:	:

Description

TIFY3AProtein TIFY 3A [Source:UniProtKB/Swiss-Prot;Acc:Q9M246]

Coordinates

chr3:+:15367546..15370157

Molecular Weight (calculated)

25842.9 Da

IEP (calculated)

10.705

GRAVY (calculated)

-0.158

Length

238 amino acids

Sequence
(BLAST)

001: MAEVNGDFPV PSFADGTGSV SAGLDLLVER SIHEARSTEP DASTQLTIIF GGSCRVFNGV PAQKVQEIIR IAFAGKQTKN VTGINPALNR ALSFSTVADL
101: PIARRRSLQR FLEKRRDRST KPDGSMILPS QLTIIFGGSF SVFDGIPAEK VQEILHIAAA AKATETINLT SINPALKRAI SFSNASTVAC VSTADVPIAR
201: RRSLQRFFEK RRHRFVHTKP YSATTSEADK NETSPIVT

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.