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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 4
  • plasma membrane 4
  • golgi 4
PPI

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G43440.1 TraesCS1A01G193200.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS1A01G369200.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS1B01G208000.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS1B01G387900.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS1D01G196900.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS1D01G374800.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS2A01G448500.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS2B01G469200.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS2B01G469300.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS5A01G306200.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS5A01G306400.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS5A01G306500.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS5A01G306600.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS5A01G306700.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS5B01G306600.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS5B01G306800.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS5B01G307000.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS5B01G307100.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS5D01G313400.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS5D01G313500.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS5D01G313600.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS5D01G313700.1 AT1G32640.1 19309455
AT3G43440.1 TraesCS7D01G102200.1 AT1G32640.1 19309455
AT3G43440.1 TraesCSU01G222600.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS1A01G193200.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS1A01G369200.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS1B01G208000.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS1B01G387900.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS1D01G196900.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS1D01G374800.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS2A01G448500.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS2B01G469200.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS2B01G469300.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS5A01G306200.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS5A01G306400.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS5A01G306500.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS5A01G306600.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS5A01G306700.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS5B01G306600.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS5B01G306800.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS5B01G307000.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS5B01G307100.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS5D01G313400.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS5D01G313500.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS5D01G313600.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS5D01G313700.1 AT1G32640.1 19309455
AT5G20900.1 TraesCS7D01G102200.1 AT1G32640.1 19309455
AT5G20900.1 TraesCSU01G222600.1 AT1G32640.1 19309455
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G506500.1 Wheat cytosol 82.45 77.11
HORVU2Hr1G112360.1 Barley cytosol, mitochondrion, nucleus 77.66 73.37
TraesCS2D01G507200.1 Wheat nucleus 78.19 71.01
Zm00001d033972_P002 Maize cytosol, extracellular, plastid 55.85 60.69
Zm00001d044708_P001 Maize cytosol, extracellular, plastid 43.09 54.0
OQU82468 Sorghum nucleus 56.38 48.4
Zm00001d002029_P003 Maize nucleus 54.79 47.69
Os04t0653000-01 Rice cytosol, nucleus, plastid 52.13 45.37
Zm00001d026477_P002 Maize nucleus 45.74 37.39
GSMUA_Achr8P24590_001 Banana nucleus 37.23 30.7
GSMUA_Achr4P09660_001 Banana cytosol 35.11 30.14
CDX92427 Canola cytosol 30.85 28.86
Bra002338.1-P Field mustard cytosol 30.32 28.36
AT5G20900.1 Thale cress cytosol 28.19 28.34
KRH12644 Soybean nucleus 29.79 27.86
KRH37606 Soybean cytosol, nucleus, plastid 30.32 27.67
CDY16574 Canola cytoskeleton, cytosol, nucleus 29.26 27.64
Bra020135.1-P Field mustard cytosol 32.45 27.6
CDY09086 Canola cytosol 31.91 27.15
TraesCS2B01G195600.1 Wheat plastid 25.0 20.35
KRH19420 Soybean nucleus 22.34 20.29
AT3G43440.1 Thale cress cytosol 25.0 19.75
KRH02523 Soybean cytosol 20.21 19.29
TraesCS5B01G211000.1 Wheat nucleus 23.4 19.13
Protein Annotations
EnsemblPlants:TraesCS2B01G534800.1EnsemblPlantsGene:TraesCS2B01G534800InterPro:CCT_CSInterPro:IPR010399InterPro:Tify_domPANTHER:PTHR33077
PANTHER:PTHR33077:SF5PFAM:PF06200PFAM:PF09425PFscan:PS51320SEG:segSMART:SM00979
TMHMM:TMhelixMapMan:15.5.45::::
Description
No Description!
Coordinates
chr2B:-:730999878..731004692
Molecular Weight (calculated)
19725.0 Da
IEP (calculated)
9.052
GRAVY (calculated)
0.187
Length
188 amino acids
Sequence
(BLAST)
001: MCAVCANFPI HLCIYVISYY FFIAYSNYLC CLIIRSGMLP MSSPPANPGQ LTIFYGGSVC VYDSVPPEKA QAIMLIAAAA AAASKSNGTA AVKPPAMSAT
101: NAIQAMLTRS LSLQSTSVAN GQPQAVADPG SICKLQADLP IARRHSLQRF LEKRRDRVVS KAPYGAGKPS EGMGASSGME AVAEGKAQ
Best Arabidopsis Sequence Match ( AT5G20900.1 )
(BLAST)
001: MTKVKDEPRA SVEGGCGVAD GDGGAAEIGG TGSVEKSINE VRSTEIQTAE PTVPPNQLTI FFGGSVTVFD GLPSEKVQEI LRIAAKAMET KNSTSISPVS
101: SPALNRAPSF SSTSNVASPA AQPFPIQPIS FCRSTADLPI ARRHSLQRFL EKRRDRLVNK NPYPTSDFKK TDVPTGNVSI KEEFPTA
Arabidopsis Description
TIFY3BProtein TIFY 3B [Source:UniProtKB/Swiss-Prot;Acc:Q9C5K8]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.