Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY37269 | Canola | nucleus | 60.64 | 62.92 |
| CDY46022 | Canola | nucleus | 60.64 | 62.92 |
| Bra008172.1-P | Field mustard | nucleus | 60.24 | 62.5 |
| Bra015880.1-P | Field mustard | cytosol | 59.04 | 60.0 |
| CDY45408 | Canola | cytosol | 59.04 | 60.0 |
| CDX73127 | Canola | cytosol | 57.83 | 58.78 |
| Bra003778.1-P | Field mustard | cytosol | 49.8 | 55.86 |
| AT1G19180.1 | Thale cress | cytosol | 52.61 | 51.78 |
| CDX85865 | Canola | cytosol | 44.18 | 49.11 |
| CDX68156 | Canola | cytosol | 35.34 | 48.62 |
| VIT_11s0016g00710.t01 | Wine grape | cytosol, plastid | 41.37 | 38.43 |
| Solyc07g042170.2.1 | Tomato | cytosol | 31.73 | 36.57 |
| PGSC0003DMT400075155 | Potato | nucleus | 30.52 | 35.35 |
| GSMUA_Achr2P21770_001 | Banana | mitochondrion | 30.52 | 34.39 |
| GSMUA_Achr6P31050_001 | Banana | cytosol | 29.32 | 34.27 |
| GSMUA_Achr5P22110_001 | Banana | mitochondrion | 32.53 | 32.79 |
| PGSC0003DMT400007592 | Potato | nucleus | 32.93 | 32.28 |
| Solyc12g009220.1.1 | Tomato | nucleus | 32.53 | 32.14 |
| Zm00001d022139_P001 | Maize | plastid | 29.72 | 31.76 |
| GSMUA_Achr9P14370_001 | Banana | cytosol | 33.73 | 31.7 |
| EER97533 | Sorghum | plastid | 28.92 | 30.64 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.12 | 30.36 |
| Os07t0615200-01 | Rice | mitochondrion | 29.72 | 30.33 |
| GSMUA_Achr3P05920_001 | Banana | nucleus | 30.52 | 30.28 |
| GSMUA_Achr5P05170_001 | Banana | cytosol, mitochondrion, nucleus | 28.92 | 29.88 |
| GSMUA_Achr8P16780_001 | Banana | cytosol | 30.12 | 29.64 |
| GSMUA_Achr7P19850_001 | Banana | cytosol | 28.51 | 29.34 |
| GSMUA_Achr3P02140_001 | Banana | mitochondrion | 24.1 | 28.71 |
| EER98969 | Sorghum | cytosol | 25.3 | 28.51 |
| GSMUA_Achr3P10270_001 | Banana | cytosol | 25.7 | 28.32 |
| TraesCS2B01G195600.1 | Wheat | plastid | 26.1 | 28.14 |
| Zm00001d029448_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 25.7 | 28.07 |
| EER92157 | Sorghum | plastid | 25.7 | 28.07 |
| TraesCS2D01G176800.1 | Wheat | plastid | 25.7 | 27.71 |
| HORVU2Hr1G031310.9 | Barley | cytosol, mitochondrion, plastid | 26.51 | 27.62 |
| GSMUA_Achr11P... | Banana | cytosol | 25.7 | 27.59 |
| Os03t0402800-01 | Rice | plastid | 24.9 | 27.19 |
| GSMUA_Achr10P... | Banana | cytosol | 17.67 | 27.16 |
| Zm00001d006860_P001 | Maize | plastid | 28.92 | 27.07 |
| TraesCS5B01G211000.1 | Wheat | nucleus | 24.5 | 26.52 |
| TraesCS5D01G219300.2 | Wheat | nucleus | 24.5 | 26.52 |
| Zm00001d005813_P002 | Maize | cytosol, plastid | 24.1 | 26.43 |
| TraesCS2A01G169300.1 | Wheat | plastid | 24.5 | 26.41 |
| Os09t0439200-01 | Rice | plastid | 23.69 | 25.43 |
| AT5G20900.1 | Thale cress | cytosol | 18.88 | 25.13 |
| AT1G72450.1 | Thale cress | nucleus | 25.3 | 23.42 |
| Zm00001d020614_P001 | Maize | cytosol, plastid | 20.48 | 23.39 |
| GSMUA_Achr1P21870_001 | Banana | mitochondrion | 31.33 | 22.1 |
| TraesCS5A01G212800.1 | Wheat | plastid | 25.7 | 21.62 |
| HORVU5Hr1G062290.6 | Barley | mitochondrion, plastid | 24.5 | 20.68 |
| AT1G17380.1 | Thale cress | nucleus | 22.49 | 20.44 |
| AT3G43440.1 | Thale cress | cytosol | 17.27 | 18.07 |
Protein Annotations
| MapMan:11.7.2.1.2 | MapMan:15.5.45 | EntrezGene:843834 | UniProt:A0A178WA69 | ProteinID:AAD55281.1 | ProteinID:AAG51928.1 |
| ProteinID:AEE35654.1 | EMBL:AF344319 | EMBL:AF386959 | ArrayExpress:AT1G74950 | EnsemblPlantsGene:AT1G74950 | RefSeq:AT1G74950 |
| TAIR:AT1G74950 | RefSeq:AT1G74950-TAIR-G | EnsemblPlants:AT1G74950.1 | TAIR:AT1G74950.1 | EMBL:AY086993 | Unigene:At.19896 |
| EMBL:BT006301 | InterPro:CCT_CS | GO:GO:0003674 | GO:GO:0003714 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006351 |
| GO:GO:0006355 | GO:GO:0006950 | GO:GO:0006952 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009611 | GO:GO:0009719 | GO:GO:0009753 | GO:GO:0009987 |
| GO:GO:0031347 | GO:GO:1903507 | GO:GO:2000022 | InterPro:IPR010399 | Symbol:JAZ2 | RefSeq:NP_565096.1 |
| ProteinID:OAP14273.1 | PFAM:PF06200 | PFAM:PF09425 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PFscan:PS51320 | PANTHER:PTHR33077 | PANTHER:PTHR33077:SF13 | UniProt:Q9S7M2 | SMART:SM00979 |
| InterPro:Tify_dom | UniParc:UPI00000A3C3D | SEG:seg | : | : | : |
Description
TIFY10BTIFY10B [Source:UniProtKB/TrEMBL;Acc:A0A178WA69]
Coordinates
chr1:-:28148575..28150446
Molecular Weight (calculated)
27073.8 Da
IEP (calculated)
8.869
GRAVY (calculated)
-0.604
Length
249 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSFSAECWD FSGRKPSFSQ TCTRLSRYLK EKGSFGDLSL GMTCKPDVNG GSRQPTMMNL FPCEASGMDS SAGQEDIKPK TMFPRQSSFS SSSSSGTKED
101: VQMIKETTKS VKPESQSAPL TIFYGGRVMV FDDFSAEKAK EVIDLANKGS AKSFTCFTAE VNNNHSAYSQ KEIASSPNPV CSPAKTAAQE PIQPNPASLA
201: CELPIARRAS LHRFLEKRKD RITSKAPYQI DGSAEASSKP TNPAWLSSR
101: VQMIKETTKS VKPESQSAPL TIFYGGRVMV FDDFSAEKAK EVIDLANKGS AKSFTCFTAE VNNNHSAYSQ KEIASSPNPV CSPAKTAAQE PIQPNPASLA
201: CELPIARRAS LHRFLEKRKD RITSKAPYQI DGSAEASSKP TNPAWLSSR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.