Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 2
- plastid 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d029448_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 65.79 | 65.79 |
| Os03t0402800-01 | Rice | plastid | 54.39 | 54.39 |
| EER97533 | Sorghum | plastid | 47.37 | 45.96 |
| GSMUA_Achr3P02140_001 | Banana | mitochondrion | 34.65 | 37.8 |
| GSMUA_Achr2P21770_001 | Banana | mitochondrion | 35.09 | 36.2 |
| GSMUA_Achr11P... | Banana | cytosol | 35.09 | 34.48 |
| Solyc07g042170.2.1 | Tomato | cytosol | 30.7 | 32.41 |
| PGSC0003DMT400075155 | Potato | nucleus | 29.39 | 31.16 |
| EER98969 | Sorghum | cytosol | 29.82 | 30.77 |
| GSMUA_Achr8P16780_001 | Banana | cytosol | 33.77 | 30.43 |
| CDX73289 | Canola | cytosol | 24.12 | 29.26 |
| CDX68156 | Canola | cytosol | 22.37 | 28.18 |
| CDX73127 | Canola | cytosol | 30.26 | 28.16 |
| Bra015880.1-P | Field mustard | cytosol | 30.26 | 28.16 |
| CDY45408 | Canola | cytosol | 30.26 | 28.16 |
| CDY46022 | Canola | nucleus | 28.95 | 27.5 |
| Solyc12g009220.1.1 | Tomato | nucleus | 30.26 | 27.38 |
| CDY26697 | Canola | plastid | 30.26 | 27.27 |
| Bra008172.1-P | Field mustard | nucleus | 28.51 | 27.08 |
| CDY37269 | Canola | nucleus | 28.51 | 27.08 |
| CDY41023 | Canola | plastid | 29.82 | 26.77 |
| Bra025713.1-P | Field mustard | plastid | 29.82 | 26.77 |
| Bra016520.1-P | Field mustard | plastid | 30.26 | 26.64 |
| CDX96675 | Canola | plastid | 30.7 | 26.62 |
| VIT_11s0016g00710.t01 | Wine grape | cytosol, plastid | 31.14 | 26.49 |
| AT1G19180.1 | Thale cress | cytosol | 29.39 | 26.48 |
| CDX83781 | Canola | plastid | 30.26 | 26.14 |
| AT1G74950.1 | Thale cress | cytosol | 28.07 | 25.7 |
| Bra003778.1-P | Field mustard | cytosol | 25.0 | 25.68 |
| PGSC0003DMT400007592 | Potato | nucleus | 28.51 | 25.59 |
| CDX85865 | Canola | cytosol | 24.56 | 25.0 |
| Bra031065.1-P | Field mustard | plastid | 29.82 | 24.91 |
| GSMUA_Achr1P21870_001 | Banana | mitochondrion | 34.21 | 22.1 |
| OQU82468 | Sorghum | nucleus | 17.98 | 18.72 |
| CDX81917 | Canola | plastid | 31.58 | 14.17 |
| CDY21679 | Canola | plastid | 31.14 | 13.03 |
Protein Annotations
| MapMan:11.7.2.1.2 | MapMan:15.5.45 | EntrezGene:8077075 | UniProt:C5WXI6 | InterPro:CCT_CS | EnsemblPlants:EER92157 |
| ProteinID:EER92157 | ProteinID:EER92157.1 | GO:GO:0003674 | GO:GO:0003714 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009611 | GO:GO:0009719 | GO:GO:0009987 |
| GO:GO:0031347 | GO:GO:1903507 | GO:GO:2000022 | InterPro:IPR010399 | PFAM:PF06200 | PFAM:PF09425 |
| PFscan:PS51320 | PANTHER:PTHR33077 | PANTHER:PTHR33077:SF9 | SMART:SM00979 | EnsemblPlantsGene:SORBI_3001G343900 | unigene:Sbi.4144 |
| InterPro:Tify_dom | UniParc:UPI0001A82171 | RefSeq:XP_002465159.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr1:+:63205787..63208276
Molecular Weight (calculated)
24052.7 Da
IEP (calculated)
9.425
GRAVY (calculated)
-0.445
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPAKSGEKA TSFAMACSLL SRYVRQNGAA AGDLGLAIRA EADGKRASAD TEKGDTTKET MDLFPQNAGF GSEAAMKEAP DVREPEKRQL TIFYGGKVLV
101: FNDFPAEKAK DLMQMASKGS SVAQNPGMLP SPTVATVTDS TKITAVPAAP IAVVNAQKSP ADIPQAPKAS LRRFLEKRKD RLTAKAPYQG SPSDATPVKK
201: EMAEGQPWLG LGPQIANPDL SLCKEGSQ
101: FNDFPAEKAK DLMQMASKGS SVAQNPGMLP SPTVATVTDS TKITAVPAAP IAVVNAQKSP ADIPQAPKAS LRRFLEKRKD RLTAKAPYQG SPSDATPVKK
201: EMAEGQPWLG LGPQIANPDL SLCKEGSQ
001: MSSSMECSEF VGSRRFTGKK PSFSQTCSRL SQYLKENGSF GDLSLGMACK PDVNGTLGNS RQPTTTMSLF PCEASNMDSM VQDVKPTNLF PRQPSFSSSS
101: SSLPKEDVLK MTQTTRSVKP ESQTAPLTIF YAGQVIVFND FSAEKAKEVI NLASKGTANS LAKNQTDIRS NIATIANQVP HPRKTTTQEP IQSSPTPLTE
201: LPIARRASLH RFLEKRKDRV TSKAPYQLCD PAKASSNPQT TGNMSWLGLA AEI
101: SSLPKEDVLK MTQTTRSVKP ESQTAPLTIF YAGQVIVFND FSAEKAKEVI NLASKGTANS LAKNQTDIRS NIATIANQVP HPRKTTTQEP IQSSPTPLTE
201: LPIARRASLH RFLEKRKDRV TSKAPYQLCD PAKASSNPQT TGNMSWLGLA AEI
Arabidopsis Description
TIFY10ATIFY10A [Source:UniProtKB/TrEMBL;Acc:A0A178W7G1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.