Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G01260.1 | EER92157 | AT1G19180.1 | 21798944 |
| AT1G01260.1 | EER97533 | AT1G19180.1 | 21798944 |
| AT1G01260.1 | EER98969 | AT1G19180.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER99993 | Sorghum | nucleus | 62.69 | 59.16 |
| TraesCS3A01G158600.1 | Wheat | nucleus | 61.84 | 58.93 |
| TraesCS3B01G185400.1 | Wheat | nucleus | 62.35 | 58.56 |
| TraesCS3D01G166300.2 | Wheat | nucleus | 62.01 | 58.24 |
| GSMUA_Achr10P... | Banana | nucleus | 38.84 | 49.67 |
| HORVU3Hr1G057280.2 | Barley | nucleus | 62.35 | 47.72 |
| GSMUA_Achr7P14640_001 | Banana | nucleus | 38.84 | 47.11 |
| GSMUA_Achr8P05350_001 | Banana | nucleus | 34.75 | 45.23 |
| GSMUA_Achr1P28110_001 | Banana | nucleus | 37.65 | 44.47 |
| GSMUA_Achr8P26280_001 | Banana | cytosol | 34.07 | 43.2 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 34.24 | 42.32 |
| CDY27319 | Canola | nucleus | 31.86 | 42.21 |
| PGSC0003DMT400000652 | Potato | nucleus | 42.42 | 41.64 |
| Solyc01g096050.2.1 | Tomato | nucleus | 42.59 | 41.32 |
| KRH68922 | Soybean | nucleus | 38.33 | 40.91 |
| VIT_15s0046g00320.t01 | Wine grape | nucleus | 42.08 | 40.89 |
| CDY66312 | Canola | nucleus | 31.18 | 39.96 |
| Bra039279.1-P | Field mustard | nucleus | 31.18 | 39.87 |
| GSMUA_Achr6P35730_001 | Banana | nucleus | 33.22 | 39.71 |
| GSMUA_Achr1P14370_001 | Banana | cytosol, nucleus, plastid | 38.5 | 39.3 |
| PGSC0003DMT400018046 | Potato | extracellular, nucleus | 38.5 | 39.1 |
| KRH47899 | Soybean | nucleus | 41.57 | 38.98 |
| Solyc05g050560.1.1 | Tomato | nucleus | 37.65 | 38.17 |
| Bra004532.1-P | Field mustard | nucleus | 31.52 | 38.07 |
| EES01345 | Sorghum | nucleus | 31.35 | 38.02 |
| CDX80023 | Canola | nucleus | 31.52 | 37.99 |
| KRH06456 | Soybean | nucleus | 39.86 | 37.86 |
| CDX90021 | Canola | nucleus | 34.58 | 37.59 |
| CDY56874 | Canola | nucleus | 31.35 | 37.47 |
| AT1G01260.1 | Thale cress | nucleus | 37.65 | 37.46 |
| Bra033273.1-P | Field mustard | nucleus | 36.63 | 36.82 |
| KRG97199 | Soybean | nucleus | 38.33 | 36.35 |
| AT2G46510.1 | Thale cress | nucleus | 34.24 | 35.51 |
| EER99201 | Sorghum | nucleus | 13.46 | 26.69 |
| KXG25462 | Sorghum | nucleus | 12.44 | 26.26 |
| EER97058 | Sorghum | cytosol, nucleus, plastid | 11.58 | 24.64 |
| OQU86344 | Sorghum | nucleus | 10.22 | 23.44 |
| OQU75588 | Sorghum | nucleus | 10.39 | 23.19 |
| OQU80776 | Sorghum | nucleus | 10.39 | 23.19 |
| OQU80778 | Sorghum | nucleus | 10.56 | 22.96 |
| KXG39194 | Sorghum | nucleus | 26.75 | 22.21 |
| OQU80775 | Sorghum | cytosol, nucleus, peroxisome, plastid | 10.22 | 21.51 |
| OQU80777 | Sorghum | nucleus | 10.05 | 21.07 |
| OQU82117 | Sorghum | nucleus | 17.55 | 17.46 |
| OQU81560 | Sorghum | nucleus | 16.87 | 16.81 |
| KXG37671 | Sorghum | nucleus | 10.05 | 16.57 |
| OQU82120 | Sorghum | nucleus | 16.18 | 16.16 |
| EES10849 | Sorghum | nucleus | 9.37 | 15.94 |
| OQU92034 | Sorghum | nucleus | 8.52 | 15.77 |
| KXG37866 | Sorghum | nucleus | 9.71 | 15.36 |
| EER93685 | Sorghum | mitochondrion | 9.71 | 15.32 |
| EER93684 | Sorghum | nucleus | 9.71 | 14.81 |
| KXG39824 | Sorghum | nucleus | 8.18 | 14.72 |
| OQU88697 | Sorghum | nucleus | 16.35 | 14.18 |
| OQU92032 | Sorghum | nucleus | 8.18 | 14.12 |
| OQU77369 | Sorghum | nucleus | 9.71 | 13.57 |
| OQU75589 | Sorghum | nucleus | 8.69 | 13.25 |
| OQU82119 | Sorghum | nucleus | 11.93 | 12.82 |
| KXG24110 | Sorghum | nucleus | 8.69 | 12.81 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EntrezGene:8066652 | UniProt:C5YV93 | ncoils:Coil | EnsemblPlants:EES19274 |
| ProteinID:EES19274 | ProteinID:EES19274.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MYC/MYB_N | PFAM:PF00010 | PFAM:PF14215 |
| PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF47 | SMART:SM00353 | EnsemblPlantsGene:SORBI_3009G088100 | SUPFAM:SSF47459 |
| unigene:Sbi.7805 | UniParc:UPI0001A8883D | RefSeq:XP_002440844.1 | InterPro:bHLH_dom | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr9:-:15112563..15116797
Molecular Weight (calculated)
64292.1 Da
IEP (calculated)
6.595
GRAVY (calculated)
-0.426
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: MKTEVEEVSI GQFWTEEDKA LCSSVLGSDA FTYLTKCGGA ISEGLVAASV LADLQNKLQN LVEADDQSIR WDYAIFWQLS RTKSGAIVLG WGDGSCREPH
101: DSEIGFATSM SVDDASLVTR QKMRKRVLQR LHTAFAGADE EDYAPGIDQV TNTEIFFLAS MYFAFPRHVG GPGKVFGAEA PLWIPNNKHN VSPANYCYRG
201: FLANAAGFKT IVLVPFKAGV LEVGSMQNVP ESAEALQTIR SMFLGTCSDR IAIEKHEDSS SVQISPGLTK IFGKDLSIRQ PSDSKGADPS KVDESSMIAQ
301: KSGGGESRLL PNLRKGLQNF SWSQSRGLSS DQQKFGNGIL VETSETANCS NGASHSTTVS PFQLQNPQQI LAQQASQPRG PMQIDFRVGS SSKFGVLISQ
401: KAMLDVDKGN ANDLFDEERE GRQPRKRERK PTNGREEPPL SHVEAERQRR EKLNKRFCAL RAIVPNISKM DKASILEDAV MHIGDLKKKL EKLEAERDQL
501: PEQTPGPEVD IQVVQGEILV RAVSQIENHP IQKVLQAFED AEVKVGESKV TANNGTVVHS FVIKSPGSEQ HTRKKLLASI SNATSAV
101: DSEIGFATSM SVDDASLVTR QKMRKRVLQR LHTAFAGADE EDYAPGIDQV TNTEIFFLAS MYFAFPRHVG GPGKVFGAEA PLWIPNNKHN VSPANYCYRG
201: FLANAAGFKT IVLVPFKAGV LEVGSMQNVP ESAEALQTIR SMFLGTCSDR IAIEKHEDSS SVQISPGLTK IFGKDLSIRQ PSDSKGADPS KVDESSMIAQ
301: KSGGGESRLL PNLRKGLQNF SWSQSRGLSS DQQKFGNGIL VETSETANCS NGASHSTTVS PFQLQNPQQI LAQQASQPRG PMQIDFRVGS SSKFGVLISQ
401: KAMLDVDKGN ANDLFDEERE GRQPRKRERK PTNGREEPPL SHVEAERQRR EKLNKRFCAL RAIVPNISKM DKASILEDAV MHIGDLKKKL EKLEAERDQL
501: PEQTPGPEVD IQVVQGEILV RAVSQIENHP IQKVLQAFED AEVKVGESKV TANNGTVVHS FVIKSPGSEQ HTRKKLLASI SNATSAV
001: MNMSDLGWDD EDKSVVSAVL GHLASDFLRA NSNSNQNLFL VMGTDDTLNK KLSSLVDWPN SENFSWNYAI FWQQTMSRSG QQVLGWGDGC CREPNEEEES
101: KVVRSYNFNN MGAEEETWQD MRKRVLQKLH RLFGGSDEDN YALSLEKVTA TEIFFLASMY FFFNHGEGGP GRCYSSGKHV WLSDAVNSES DYCFRSFMAK
201: SAGIRTIVMV PTDAGVLELG SVWSLPENIG LVKSVQALFM RRVTQPVMVT SNTNMTGGIH KLFGQDLSGA HAYPKKLEVR RNLDERFTPQ SWEGYNNNKG
301: PTFGYTPQRD DVKVLENVNM VVDNNNYKTQ IEFAGSSVAA SSNPSTNTQQ EKSESCTEKR PVSLLAGAGI VSVVDEKRPR KRGRKPANGR EEPLNHVEAE
401: RQRREKLNQR FYALRSVVPN ISKMDKASLL GDAISYIKEL QEKVKIMEDE RVGTDKSLSE SNTITVEESP EVDIQAMNEE VVVRVISPLD SHPASRIIQA
501: MRNSNVSLME AKLSLAEDTM FHTFVIKSNN GSDPLTKEKL IAAFYPETSS TQPPLPSSSS QVSGDI
101: KVVRSYNFNN MGAEEETWQD MRKRVLQKLH RLFGGSDEDN YALSLEKVTA TEIFFLASMY FFFNHGEGGP GRCYSSGKHV WLSDAVNSES DYCFRSFMAK
201: SAGIRTIVMV PTDAGVLELG SVWSLPENIG LVKSVQALFM RRVTQPVMVT SNTNMTGGIH KLFGQDLSGA HAYPKKLEVR RNLDERFTPQ SWEGYNNNKG
301: PTFGYTPQRD DVKVLENVNM VVDNNNYKTQ IEFAGSSVAA SSNPSTNTQQ EKSESCTEKR PVSLLAGAGI VSVVDEKRPR KRGRKPANGR EEPLNHVEAE
401: RQRREKLNQR FYALRSVVPN ISKMDKASLL GDAISYIKEL QEKVKIMEDE RVGTDKSLSE SNTITVEESP EVDIQAMNEE VVVRVISPLD SHPASRIIQA
501: MRNSNVSLME AKLSLAEDTM FHTFVIKSNN GSDPLTKEKL IAAFYPETSS TQPPLPSSSS QVSGDI
Arabidopsis Description
AIBTranscription factor ABA-INDUCIBLE bHLH-TYPE [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.