Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d031167_P002 | Maize | nucleus | 88.44 | 89.57 |
| Os12t0632600-00 | Rice | nucleus | 50.75 | 57.39 |
| TraesCS5D01G020600.1 | Wheat | nucleus | 52.76 | 56.15 |
| HORVU5Hr1G002090.11 | Barley | nucleus | 53.52 | 55.76 |
| TraesCS5A01G014800.1 | Wheat | nucleus | 53.52 | 54.2 |
| TraesCS7A01G558700.1 | Wheat | nucleus | 42.96 | 53.27 |
| TraesCS5B01G013000.2 | Wheat | nucleus | 50.0 | 52.65 |
| TraesCS7B01G483600.1 | Wheat | nucleus | 40.95 | 50.78 |
| KXG37866 | Sorghum | nucleus | 40.45 | 43.4 |
| EES10849 | Sorghum | nucleus | 36.93 | 42.61 |
| EER93684 | Sorghum | nucleus | 37.94 | 39.22 |
| EER93685 | Sorghum | mitochondrion | 35.93 | 38.44 |
| HORVU7Hr1G120420.2 | Barley | nucleus | 37.19 | 38.34 |
| OQU77369 | Sorghum | nucleus | 34.42 | 32.62 |
| OQU75589 | Sorghum | nucleus | 31.16 | 32.21 |
| KXG37671 | Sorghum | nucleus | 26.63 | 29.78 |
| KXG39824 | Sorghum | nucleus | 21.86 | 26.69 |
| OQU92034 | Sorghum | nucleus | 17.59 | 22.08 |
| OQU92032 | Sorghum | nucleus | 18.59 | 21.76 |
| KXG25462 | Sorghum | nucleus | 12.31 | 17.63 |
| EER97058 | Sorghum | cytosol, nucleus, plastid | 12.06 | 17.39 |
| OQU86344 | Sorghum | nucleus | 11.06 | 17.19 |
| OQU80776 | Sorghum | nucleus | 11.31 | 17.11 |
| OQU75588 | Sorghum | nucleus | 11.31 | 17.11 |
| OQU80778 | Sorghum | nucleus | 11.56 | 17.04 |
| OQU80775 | Sorghum | cytosol, nucleus, peroxisome, plastid | 11.81 | 16.85 |
| OQU80777 | Sorghum | nucleus | 11.81 | 16.79 |
| EER99201 | Sorghum | nucleus | 12.31 | 16.55 |
| EES01345 | Sorghum | nucleus | 13.57 | 11.16 |
| EER99993 | Sorghum | nucleus | 14.32 | 9.16 |
| OQU88697 | Sorghum | nucleus | 15.58 | 9.16 |
| OQU82117 | Sorghum | nucleus | 13.32 | 8.98 |
| EES19274 | Sorghum | nucleus | 12.81 | 8.69 |
| OQU82119 | Sorghum | nucleus | 11.81 | 8.61 |
| OQU81560 | Sorghum | nucleus | 12.56 | 8.49 |
| OQU82120 | Sorghum | nucleus | 12.31 | 8.33 |
| KXG39194 | Sorghum | nucleus | 14.57 | 8.2 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | UniProt:A0A1B6PEI3 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| EnsemblPlants:KXG24110 | ProteinID:KXG24110 | ProteinID:KXG24110.1 | ProteinID:KXG24111.1 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR23042 | PANTHER:PTHR23042:SF74 | SMART:SM00353 | EnsemblPlantsGene:SORBI_3008G186100 | SUPFAM:SSF47459 | UniParc:UPI0001C80831 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:62072508..62078284
Molecular Weight (calculated)
41461.6 Da
IEP (calculated)
6.851
GRAVY (calculated)
-0.283
Length
398 amino acids
Sequence
(BLAST)
(BLAST)
001: MMDRHMEDSS TFLQWAMNHL QHHQHPATAA AAAAYQQEGG AGVGARISGG AGDQEIQDAA AAFPSLQVLR ASQPQTAVPA SVRVRDLTVQ VGDYGGLTNS
101: SSSGDSPGAG AGAAMDHDAV AAAWSPHTAR SRTTGLGGGS NSRPVSWNFS AASALPADDR GAVAVALPDA TAAVARVQQR AASASAGRRG GSAGPSAAAT
201: SPGPVQDHII AERRRREKIN QRFIELSTVI PGLKKMDKAT ILGDAVKYVR ELQEKVKGLE EDGAAGGSGS IQSAVLVTKQ QCHMSEDEAM ASSHGGSGGA
301: DGGMQLPEIE ARLSERSVLL RIHCYSARGL LVRVISEVEQ MQLSITHTNV MPFPASTAII TITAKVEEGF NATVDEIVRR INSALRQHYS SSSEETRG
101: SSSGDSPGAG AGAAMDHDAV AAAWSPHTAR SRTTGLGGGS NSRPVSWNFS AASALPADDR GAVAVALPDA TAAVARVQQR AASASAGRRG GSAGPSAAAT
201: SPGPVQDHII AERRRREKIN QRFIELSTVI PGLKKMDKAT ILGDAVKYVR ELQEKVKGLE EDGAAGGSGS IQSAVLVTKQ QCHMSEDEAM ASSHGGSGGA
301: DGGMQLPEIE ARLSERSVLL RIHCYSARGL LVRVISEVEQ MQLSITHTNV MPFPASTAII TITAKVEEGF NATVDEIVRR INSALRQHYS SSSEETRG
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.