Factsheet for HORVU7Hr1G120420.2

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

cytosol 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G558700.1	Wheat	nucleus	60.62	72.9
TraesCS7B01G483600.1	Wheat	nucleus	58.29	70.09
HORVU5Hr1G002090.11	Barley	nucleus	41.71	42.15
KXG24110	Sorghum	nucleus	38.34	37.19
Zm00001d031167_P002	Maize	nucleus	37.56	36.9
Os12t0632600-00	Rice	nucleus	33.42	36.65
HORVU3Hr1G002620.1	Barley	plastid	19.95	33.48
HORVU4Hr1G003210.1	Barley	nucleus	30.57	32.33
HORVU0Hr1G014300.1	Barley	nucleus	26.17	30.61
HORVU4Hr1G078880.2	Barley	nucleus	26.94	28.49
HORVU4Hr1G078910.2	Barley	nucleus	27.2	28.3
HORVU4Hr1G003340.3	Barley	nucleus	27.72	23.11
HORVU4Hr1G009440.2	Barley	nucleus	19.95	22.58
HORVU5Hr1G080080.1	Barley	nucleus, plastid	8.55	15.71
HORVU0Hr1G025420.1	Barley	cytosol, nucleus	6.48	15.24
HORVU5Hr1G080040.1	Barley	nucleus	9.84	14.18
HORVU5Hr1G079900.1	Barley	cytosol	8.03	11.48
HORVU4Hr1G065640.6	Barley	nucleus	9.59	10.85
HORVU3Hr1G066390.1	Barley	nucleus	10.62	8.82
HORVU2Hr1G096810.5	Barley	nucleus	12.18	8.38
HORVU1Hr1G020370.2	Barley	extracellular, nucleus	10.62	8.06
HORVU1Hr1G050560.1	Barley	nucleus	13.99	7.89
HORVU3Hr1G057280.2	Barley	nucleus	10.88	5.48

Protein Annotations

EMBL:AK359606	EnsemblPlants:HORVU7Hr1G120420.2	EnsemblPlantsGene:HORVU7Hr1G120420	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom
PANTHER:PTHR23042	PANTHER:PTHR23042:SF74	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI0002005776	UniProt:F2D6U4	MapMan:15.5.32	MapMan:25.4.1.7	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D6U4]

Coordinates

chrchr7H:+:651378564..651384787

Molecular Weight (calculated)

42239.7 Da

IEP (calculated)

9.996

GRAVY (calculated)

-0.320

Length

386 amino acids

Sequence
(BLAST)

001: MEDSSFMEWA INTLDQHTFP ATAASPEYDI GSFHCGEHAA AAFPSQALPG DNWDSSSGDA VVRAAVARAS TPMSAASTRS DARGGQKRAG GRRSGSSLQL
101: QGSATSSTSS DPAKDHIIAE RHRRAKINQR LMELSTLIPG LKKMNKATII GDAVKHVREL HEKVKILENN NMHASTTTIS SAVLVHKKRP CLGGRTSNYG
201: NDDVGDPSQL GTWLPEIKVW FSDKSVLLHI HCENTNGILV RVLAEVEVVR LAITHTSSMP FLANTTIINI TAKKRDNEAK KHMFLGKQTE EGWIITGSRH
301: LRGRDWMEKA RTCLYQIKIC RIAQSLIFLT VGRRVQLNSG GDGQKAELCT GSKLGYPELV HTVVKLVFDA FTLMPTIMGP FTNKAK

Best Arabidopsis Sequence Match ( AT4G37850.1 )
(BLAST)

001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI

Arabidopsis Description

BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.