Factsheet for HORVU3Hr1G066390.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G253700.1	Wheat	nucleus	89.68	89.68
TraesCS3A01G252900.1	Wheat	nucleus	88.39	89.54
TraesCS3B01G288700.1	Wheat	nucleus	85.16	89.39
TraesCS3B01G284800.1	Wheat	nucleus	90.97	89.05
Os01t0705700-01	Rice	nucleus	74.19	75.0
Zm00001d043706_P001	Maize	nucleus	72.04	71.73
EES01345	Sorghum	nucleus	74.62	71.69
VIT_07s0141g01060.t01	Wine grape	nucleus	36.56	34.62
Bra038458.1-P	Field mustard	nucleus	32.47	33.48
CDY32242	Canola	nucleus	32.47	33.48
CDY34468	Canola	nucleus	32.26	33.26
AT4G16430.1	Thale cress	nucleus	33.33	33.19
Bra012720.1-P	Field mustard	nucleus	31.83	32.46
CDX90525	Canola	nucleus	31.83	32.46
KRH19522	Soybean	nucleus	35.05	32.21
PGSC0003DMT400051672	Potato	nucleus	32.9	32.08
KRH32144	Soybean	nucleus	34.62	31.94
Solyc06g083980.1.1	Tomato	nucleus	32.47	31.66
HORVU0Hr1G025420.1	Barley	cytosol, nucleus	10.54	29.88
HORVU5Hr1G080080.1	Barley	nucleus, plastid	12.9	28.57
CDY09695	Canola	nucleus	29.46	28.13
HORVU5Hr1G080040.1	Barley	nucleus	15.91	27.61
HORVU3Hr1G057280.2	Barley	nucleus	42.37	25.68
HORVU5Hr1G079900.1	Barley	cytosol	14.41	24.81
HORVU1Hr1G050560.1	Barley	nucleus	33.76	22.95
HORVU2Hr1G096810.5	Barley	nucleus	22.8	18.89
HORVU3Hr1G002620.1	Barley	plastid	8.17	16.52
HORVU4Hr1G003210.1	Barley	nucleus	11.61	14.79
HORVU0Hr1G014300.1	Barley	nucleus	10.32	14.55
HORVU4Hr1G009440.2	Barley	nucleus	10.54	14.37
HORVU5Hr1G002090.11	Barley	nucleus	10.75	13.09
HORVU4Hr1G078880.2	Barley	nucleus	10.11	12.88
HORVU1Hr1G020370.2	Barley	extracellular, nucleus	13.98	12.77
HORVU4Hr1G078910.2	Barley	nucleus	9.89	12.4
HORVU4Hr1G003340.3	Barley	nucleus	11.4	11.45
HORVU4Hr1G065640.6	Barley	nucleus	7.96	10.85
HORVU7Hr1G120420.2	Barley	nucleus	8.82	10.62

Protein Annotations

MapMan:15.5.32	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008150	GO:GO:0008152	GO:GO:0010629
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	EnsemblPlantsGene:HORVU3Hr1G066390	EnsemblPlants:HORVU3Hr1G066390.1	InterPro:IPR011598	InterPro:IPR036638
UniProt:M0YL23	InterPro:MYC/MYB_N	PFAM:PF00010	PFAM:PF14215	PFscan:PS50888	PANTHER:PTHR11514
PANTHER:PTHR11514:SF59	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI000296E78B	InterPro:bHLH_dom	SEG:seg

Description

No Description!

Coordinates

chrchr3H:-:505121582..505124856

Molecular Weight (calculated)

49818.2 Da

IEP (calculated)

8.046

GRAVY (calculated)

-0.302

Length

465 amino acids

Sequence
(BLAST)

001: MSWSDTDAAL FAAVLGQDAA HHLATTPPHL DGPASSSPEL QARLCDLVER GGAWTYGIYW QESRGGRPVL GWGDGHCRDG PAEDAGAATD RSLARKRALL
101: RLHALYGGGD EDGADYALRL DRVTGAEMYF LASMYFSFPG DAGGPGRALT SGHHAWAAVD PHLPGSAPGW YVRASLAQSA GLRTVVFLPC KGGVLELGSV
201: VAMRENPEVL RAIQSAFHVE ADHMRIFGQD VSRSPPMPPV QVQPTGCDAT WALRLGGQAM VARPAKKEVV VVKPKPQEPP KTISFSNAVD AQKQAGGDER
301: RPRKRGRKPA NGREEPLNHV EAERQRREKL NQRFYALRAV VPKISKMDKA SLLSDAIAYI QELEGRLRGG AARPEASPSV EVKTMQDEVV LRVSTPLDAH
401: PISGAFNAVR DSQLSLSVVA SDMAVADDTV THTLVVRSAG PDRLTAEAVL AAISRGMMMS ATPSP

Best Arabidopsis Sequence Match ( AT4G16430.1 )
(BLAST)

001: MGQKFWENQE DRAMVESTIG SEACDFFIST ASASNTALSK LVSPPSDSNL QQGLRHVVEG SDWDYALFWL ASNVNSSDGC VLIWGDGHCR VKKGASGEDY
101: SQQDEIKRRV LRKLHLSFVG SDEDHRLVKS GALTDLDMFY LASLYFSFRC DTNKYGPAGT YVSGKPLWAA DLPSCLSYYR VRSFLARSAG FQTVLSVPVN
201: SGVVELGSLR HIPEDKSVIE MVKSVFGGSD FVQAKEAPKI FGRQLSLGGA KPRSMSINFS PKTEDDTGFS LESYEVQAIG GSNQVYGYEQ GKDETLYLTD
301: EQKPRKRGRK PANGREEALN HVEAERQRRE KLNQRFYALR AVVPNISKMD KASLLADAIT YITDMQKKIR VYETEKQIMK RRESNQITPA EVDYQQRHDD
401: AVVRLSCPLE THPVSKVIQT LRENEVMPHD SNVAITEEGV VHTFTLRPQG GCTAEQLKDK LLASLSQ

Arabidopsis Description

BHLH3Transcription factor bHLH3 [Source:UniProtKB/Swiss-Prot;Acc:O23487]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.