Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G257900.2 | Wheat | nucleus | 92.67 | 83.82 |
| TraesCS4B01G056600.2 | Wheat | nucleus | 90.03 | 82.09 |
| TraesCS4D01G056900.2 | Wheat | nucleus | 88.27 | 80.27 |
| Os03t0725800-01 | Rice | nucleus | 75.95 | 72.14 |
| KXG37671 | Sorghum | nucleus | 74.49 | 71.35 |
| Zm00001d033848_P004 | Maize | nucleus | 73.61 | 68.96 |
| Zm00001d013370_P001 | Maize | plastid | 65.4 | 59.79 |
| GSMUA_Achr8P05170_001 | Banana | nucleus | 31.38 | 53.23 |
| VIT_07s0205g00160.t01 | Wine grape | nucleus | 26.69 | 48.92 |
| VIT_00s0824g00020.t01 | Wine grape | nucleus | 24.34 | 48.54 |
| GSMUA_Achr7P27600_001 | Banana | nucleus | 46.92 | 47.9 |
| GSMUA_Achr3P30620_001 | Banana | nucleus | 45.45 | 47.84 |
| GSMUA_Achr4P03160_001 | Banana | nucleus | 44.57 | 46.48 |
| GSMUA_Achr3P26180_001 | Banana | nucleus | 39.0 | 45.08 |
| GSMUA_AchrUn_... | Banana | nucleus | 42.52 | 45.03 |
| GSMUA_Achr8P26460_001 | Banana | nucleus | 43.11 | 44.28 |
| Solyc01g106460.2.1 | Tomato | nucleus | 29.03 | 40.74 |
| GSMUA_Achr2P08590_001 | Banana | nucleus | 30.79 | 39.47 |
| VIT_03s0088g01240.t01 | Wine grape | nucleus | 39.59 | 39.24 |
| HORVU3Hr1G002620.1 | Barley | plastid | 26.1 | 38.7 |
| CDX89627 | Canola | nucleus | 30.21 | 38.58 |
| Bra013128.1-P | Field mustard | nucleus | 29.91 | 38.2 |
| CDX93135 | Canola | nucleus | 29.62 | 37.83 |
| KRH42021 | Soybean | nucleus | 20.82 | 36.41 |
| AT4G37850.1 | Thale cress | nucleus | 31.67 | 32.93 |
| Bra011790.1-P | Field mustard | nucleus | 31.96 | 32.44 |
| CDX75679 | Canola | nucleus | 31.96 | 32.44 |
| CDX89511 | Canola | nucleus | 30.5 | 32.4 |
| VIT_00s0927g00010.t01 | Wine grape | nucleus | 21.41 | 32.02 |
| Bra030210.1-P | Field mustard | nucleus | 30.21 | 31.99 |
| CDY25628 | Canola | nucleus | 30.21 | 31.99 |
| CDX69336 | Canola | nucleus | 31.67 | 31.95 |
| KRH49880 | Soybean | nucleus | 30.79 | 31.91 |
| PGSC0003DMT400033757 | Potato | nucleus | 19.65 | 31.9 |
| AT2G22750.3 | Thale cress | nucleus | 31.09 | 31.83 |
| CDY13737 | Canola | nucleus | 27.27 | 31.53 |
| VIT_07s0205g00190.t01 | Wine grape | nucleus | 31.09 | 31.36 |
| KRH10664 | Soybean | nucleus | 33.72 | 31.17 |
| PGSC0003DMT400013074 | Potato | nucleus | 32.26 | 31.16 |
| VIT_07s0205g00180.t01 | Wine grape | nucleus | 31.96 | 31.14 |
| VIT_00s1314g00010.t01 | Wine grape | nucleus | 30.5 | 31.14 |
| KRH21680 | Soybean | nucleus, vacuole | 34.31 | 31.12 |
| Bra039924.1-P | Field mustard | nucleus | 28.15 | 30.67 |
| CDX76899 | Canola | nucleus | 28.74 | 30.34 |
| Bra010617.1-P | Field mustard | nucleus | 29.62 | 30.24 |
| CDY49678 | Canola | nucleus | 29.62 | 30.24 |
| CDY72199 | Canola | nucleus | 29.62 | 30.24 |
| PGSC0003DMT400078698 | Potato | nucleus | 18.18 | 29.67 |
| HORVU0Hr1G014300.1 | Barley | nucleus | 27.57 | 28.48 |
| Solyc02g091820.1.1 | Tomato | nucleus | 26.69 | 27.91 |
| HORVU4Hr1G078880.2 | Barley | nucleus | 29.33 | 27.4 |
| HORVU4Hr1G003210.1 | Barley | nucleus | 29.33 | 27.4 |
| Solyc02g091810.1.1 | Tomato | nucleus | 25.51 | 27.36 |
| Solyc06g064580.1.1 | Tomato | nucleus | 24.34 | 27.3 |
| PGSC0003DMT400078699 | Potato | nucleus | 25.81 | 27.24 |
| Solyc06g064590.1.1 | Tomato | nucleus | 22.29 | 27.05 |
| HORVU5Hr1G002090.11 | Barley | nucleus | 30.21 | 26.96 |
| Solyc05g009640.2.1 | Tomato | cytosol, nucleus, peroxisome | 18.18 | 26.5 |
| HORVU4Hr1G078910.2 | Barley | nucleus | 28.74 | 26.42 |
| VIT_00s0384g00020.t01 | Wine grape | nucleus | 14.37 | 24.87 |
| HORVU4Hr1G003340.3 | Barley | nucleus | 30.79 | 22.68 |
| HORVU0Hr1G025420.1 | Barley | cytosol, nucleus | 9.97 | 20.73 |
| HORVU7Hr1G120420.2 | Barley | nucleus | 22.58 | 19.95 |
| HORVU5Hr1G080080.1 | Barley | nucleus, plastid | 12.02 | 19.52 |
| HORVU5Hr1G080040.1 | Barley | nucleus | 13.78 | 17.54 |
| HORVU5Hr1G079900.1 | Barley | cytosol | 12.9 | 16.3 |
| HORVU4Hr1G065640.6 | Barley | nucleus | 15.25 | 15.25 |
| HORVU3Hr1G066390.1 | Barley | nucleus | 14.37 | 10.54 |
| HORVU1Hr1G020370.2 | Barley | extracellular, nucleus | 13.78 | 9.23 |
| HORVU2Hr1G096810.5 | Barley | nucleus | 14.66 | 8.91 |
| HORVU1Hr1G050560.1 | Barley | nucleus | 17.3 | 8.63 |
| HORVU3Hr1G057280.2 | Barley | nucleus | 17.3 | 7.69 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G009440.2 | EnsemblPlantsGene:HORVU4Hr1G009440 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR11514 |
| PANTHER:PTHR11514:SF48 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000296151B | UniProt:M0Y0S4 | MapMan:15.5.32 | MapMan:25.4.1.7 | : | : |
Description
Predicted protein; Uncharacterized protein [Source:UniProtKB/TrEMBL;Acc:M0Y0S4]
Coordinates
chrchr4H:-:26788515..26791087
Molecular Weight (calculated)
37070.9 Da
IEP (calculated)
5.458
GRAVY (calculated)
-0.304
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MATQWFSNMV MDEPSFFHQW QTDATLEQYT EQQIAVAFGQ GEMEAALMQQ QYAAAAVGEH RPRKAAKVNT SWDSCVTEQG SPADSSSPTI LSFGGHADAF
101: AKAPQAGSAA AYYGAASAPV APVKPKQEVD AAAVVAPFQQ VKRSYDAMVA EPARAPSRPA AQNQDHILAE RKRREKLSER FIALSKIVPG LKKMDKASVL
201: GDAIKYVKTL QEQVKGMEEV ARRRPVESAV LVKKSQLAAD EDDGSSCDEN FEGADAGLPE IEARMSDRTV LVKIHCENRR GVLVAALSEL ESMDLTIMNT
301: NVLPFTTSSI DITIMATVST QSSPLLNCSM IYHQYTCKST T
101: AKAPQAGSAA AYYGAASAPV APVKPKQEVD AAAVVAPFQQ VKRSYDAMVA EPARAPSRPA AQNQDHILAE RKRREKLSER FIALSKIVPG LKKMDKASVL
201: GDAIKYVKTL QEQVKGMEEV ARRRPVESAV LVKKSQLAAD EDDGSSCDEN FEGADAGLPE IEARMSDRTV LVKIHCENRR GVLVAALSEL ESMDLTIMNT
301: NVLPFTTSSI DITIMATVST QSSPLLNCSM IYHQYTCKST T
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.