Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G056900.2 | Wheat | nucleus | 95.72 | 95.47 |
| HORVU4Hr1G009440.2 | Barley | nucleus | 82.09 | 90.03 |
| TraesCS4A01G257900.2 | Wheat | nucleus | 88.5 | 87.8 |
| Os03t0725800-01 | Rice | nucleus | 74.87 | 77.99 |
| KXG37671 | Sorghum | nucleus | 73.8 | 77.53 |
| Zm00001d033848_P004 | Maize | nucleus | 72.19 | 74.18 |
| Zm00001d013370_P001 | Maize | plastid | 66.04 | 66.22 |
| GSMUA_Achr8P05170_001 | Banana | nucleus | 31.28 | 58.21 |
| VIT_07s0205g00160.t01 | Wine grape | nucleus | 26.74 | 53.76 |
| VIT_00s0824g00020.t01 | Wine grape | nucleus | 24.33 | 53.22 |
| GSMUA_Achr3P30620_001 | Banana | nucleus | 44.12 | 50.93 |
| GSMUA_Achr7P27600_001 | Banana | nucleus | 44.92 | 50.3 |
| GSMUA_AchrUn_... | Banana | nucleus | 43.05 | 50.0 |
| GSMUA_Achr4P03160_001 | Banana | nucleus | 42.51 | 48.62 |
| GSMUA_Achr8P26460_001 | Banana | nucleus | 43.05 | 48.49 |
| GSMUA_Achr3P26180_001 | Banana | nucleus | 37.43 | 47.46 |
| Solyc01g106460.2.1 | Tomato | nucleus | 28.88 | 44.44 |
| GSMUA_Achr2P08590_001 | Banana | nucleus | 30.48 | 42.86 |
| VIT_03s0088g01240.t01 | Wine grape | nucleus | 37.97 | 41.28 |
| CDX89627 | Canola | nucleus | 29.41 | 41.2 |
| Bra013128.1-P | Field mustard | nucleus | 28.88 | 40.45 |
| CDX93135 | Canola | nucleus | 28.61 | 40.07 |
| KRH42021 | Soybean | nucleus | 18.98 | 36.41 |
| AT4G37850.1 | Thale cress | nucleus | 30.48 | 34.76 |
| KRH49880 | Soybean | nucleus | 30.48 | 34.65 |
| VIT_07s0205g00180.t01 | Wine grape | nucleus | 32.09 | 34.29 |
| CDX75679 | Canola | nucleus | 30.75 | 34.23 |
| Bra011790.1-P | Field mustard | nucleus | 30.75 | 34.23 |
| CDX69336 | Canola | nucleus | 30.75 | 34.02 |
| CDX89511 | Canola | nucleus | 29.14 | 33.96 |
| KRH10664 | Soybean | nucleus | 33.42 | 33.88 |
| VIT_00s1314g00010.t01 | Wine grape | nucleus | 30.21 | 33.83 |
| KRH21680 | Soybean | nucleus, vacuole | 33.96 | 33.78 |
| VIT_07s0205g00190.t01 | Wine grape | nucleus | 30.48 | 33.73 |
| PGSC0003DMT400013074 | Potato | nucleus | 31.82 | 33.71 |
| CDY25628 | Canola | nucleus | 28.88 | 33.54 |
| Bra030210.1-P | Field mustard | nucleus | 28.88 | 33.54 |
| CDY13737 | Canola | nucleus | 26.2 | 33.22 |
| TraesCS4B01G234700.1 | Wheat | nucleus | 26.47 | 32.89 |
| AT2G22750.3 | Thale cress | nucleus | 29.14 | 32.73 |
| TraesCS3B01G029800.1 | Wheat | nucleus | 28.61 | 32.62 |
| Bra039924.1-P | Field mustard | nucleus | 27.27 | 32.59 |
| VIT_00s0927g00010.t01 | Wine grape | nucleus | 19.79 | 32.46 |
| TraesCS5B01G518400.1 | Wheat | nucleus | 28.07 | 32.31 |
| Bra010617.1-P | Field mustard | nucleus | 28.61 | 32.04 |
| CDY49678 | Canola | nucleus | 28.61 | 32.04 |
| CDY72199 | Canola | nucleus | 28.61 | 32.04 |
| CDX76899 | Canola | nucleus | 27.54 | 31.89 |
| TraesCS5B01G518800.1 | Wheat | nucleus | 26.74 | 31.75 |
| TraesCS5B01G518500.1 | Wheat | nucleus | 27.27 | 31.38 |
| PGSC0003DMT400033757 | Potato | nucleus | 17.38 | 30.95 |
| TraesCS4B01G308200.1 | Wheat | nucleus | 29.41 | 30.56 |
| TraesCS4B01G020700.1 | Wheat | nucleus | 29.41 | 30.14 |
| PGSC0003DMT400078698 | Potato | nucleus | 16.58 | 29.67 |
| TraesCS4B01G308300.1 | Wheat | nucleus | 28.61 | 29.4 |
| Solyc06g064590.1.1 | Tomato | nucleus | 21.93 | 29.18 |
| TraesCS4B01G391500.1 | Wheat | nucleus | 24.6 | 28.66 |
| TraesCS4B01G020900.1 | Wheat | nucleus | 28.34 | 28.65 |
| TraesCS4B01G345800.1 | Wheat | nucleus | 23.8 | 28.62 |
| TraesCS4B01G021500.1 | Wheat | nucleus | 27.27 | 28.57 |
| TraesCS4B01G308100.1 | Wheat | nucleus | 26.47 | 28.53 |
| Solyc02g091820.1.1 | Tomato | nucleus | 24.87 | 28.53 |
| TraesCS5B01G013000.2 | Wheat | nucleus | 28.61 | 28.31 |
| Solyc06g064580.1.1 | Tomato | nucleus | 22.99 | 28.29 |
| Solyc02g091810.1.1 | Tomato | nucleus | 23.8 | 27.99 |
| PGSC0003DMT400078699 | Potato | nucleus | 23.8 | 27.55 |
| Solyc05g009640.2.1 | Tomato | cytosol, nucleus, peroxisome | 16.84 | 26.92 |
| TraesCS4B01G021200.1 | Wheat | nucleus | 26.47 | 26.83 |
| TraesCS4B01G021100.1 | Wheat | nucleus | 25.94 | 26.72 |
| TraesCS7B01G483600.1 | Wheat | nucleus | 22.19 | 25.86 |
| VIT_00s0384g00020.t01 | Wine grape | nucleus | 13.37 | 25.38 |
| TraesCS4B01G335200.1 | Wheat | nucleus | 13.9 | 21.14 |
| TraesCS5B01G307000.1 | Wheat | nucleus | 14.44 | 19.35 |
| TraesCS5B01G307100.1 | Wheat | nucleus | 13.64 | 18.68 |
| TraesCS2B01G469300.1 | Wheat | nucleus | 12.57 | 18.36 |
| TraesCS2B01G469200.1 | Wheat | nucleus | 12.03 | 18.29 |
| TraesCS5B01G306800.1 | Wheat | nucleus | 13.37 | 17.86 |
| TraesCS1B01G387900.1 | Wheat | nucleus | 10.96 | 17.15 |
| TraesCS5B01G306600.1 | Wheat | nucleus | 12.3 | 16.85 |
| TraesCS3B01G288700.1 | Wheat | nucleus | 13.37 | 11.29 |
| TraesCS3B01G284800.1 | Wheat | nucleus | 13.64 | 10.74 |
| TraesCS4B01G397300.1 | Wheat | nucleus | 11.23 | 10.32 |
| TraesCS3B01G185400.1 | Wheat | nucleus | 16.04 | 9.6 |
| TraesCS2B01G428000.1 | Wheat | nucleus | 14.44 | 9.42 |
| TraesCS1B01G208000.1 | Wheat | nucleus | 17.11 | 9.24 |
| TraesCS4B01G397400.1 | Wheat | nucleus | 13.9 | 9.22 |
| TraesCS4B01G276900.1 | Wheat | nucleus | 14.71 | 9.2 |
| TraesCS4B01G397800.1 | Wheat | nucleus | 12.3 | 9.02 |
| TraesCS1B01G112900.1 | Wheat | nucleus | 14.44 | 8.56 |
| TraesCS1B01G113100.4 | Wheat | nucleus | 14.97 | 8.14 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G056600.2 | EnsemblPlantsGene:TraesCS4B01G056600 | Gene3D:4.10.280.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:bHLH_dom | PANTHER:PTHR23042 |
| PANTHER:PTHR23042:SF100 | PFAM:PF00010 | PFscan:PS50888 | SEG:seg | SMART:SM00353 | SUPFAM:SSF47459 |
| TIGR:cd00083 | MapMan:15.5.32 | MapMan:25.4.1.7 | : | : | : |
Description
No Description!
Coordinates
chr4B:+:46221471..46222708
Molecular Weight (calculated)
40240.5 Da
IEP (calculated)
5.695
GRAVY (calculated)
-0.272
Length
374 amino acids
Sequence
(BLAST)
(BLAST)
001: MATQWFSNMV ICCSSSDSVG CNGVGRAGWL TGCSWFGGVQ VMDEPSFFHQ WQSDATLEQY TEQQIAVAFG QGEMEAAALM QQQHQYAAAA AGEHRPRKAA
101: KVNTSWDSCV TEQGSPADSS SPTILSFGGH ADAFAKAPQA PSAAAAYYGA ASAAAPVKPK QEVDAGAVAS FQQVKRSYDA MVAEPARAPS RPAAQNQDHI
201: MAERKRREKL SERFIALSKI VPGLKKMDKA SVLGDAIKYV KTLQEQVKGM EEVARRRPVE SAVLVKKSQL AADEDDGSSC DENFEGADAG LPEIEARMSD
301: RTVLVKIHCE NRRGVLVAAL SELESIDLAI MNTNVLPFTT SSIDITIMAT AGEDFSLSVK DIVRKLHQAF KSSP
101: KVNTSWDSCV TEQGSPADSS SPTILSFGGH ADAFAKAPQA PSAAAAYYGA ASAAAPVKPK QEVDAGAVAS FQQVKRSYDA MVAEPARAPS RPAAQNQDHI
201: MAERKRREKL SERFIALSKI VPGLKKMDKA SVLGDAIKYV KTLQEQVKGM EEVARRRPVE SAVLVKKSQL AADEDDGSSC DENFEGADAG LPEIEARMSD
301: RTVLVKIHCE NRRGVLVAAL SELESIDLAI MNTNVLPFTT SSIDITIMAT AGEDFSLSVK DIVRKLHQAF KSSP
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.