Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra011790.1-P | Field mustard | nucleus | 100.0 | 100.0 |
| CDX69336 | Canola | nucleus | 94.05 | 93.49 |
| CDY72199 | Canola | nucleus | 83.93 | 84.43 |
| CDY49678 | Canola | nucleus | 82.44 | 82.93 |
| AT4G37850.1 | Thale cress | nucleus | 77.08 | 78.96 |
| CDX89511 | Canola | nucleus | 58.63 | 61.37 |
| CDY13737 | Canola | nucleus | 52.38 | 59.66 |
| CDY25628 | Canola | nucleus | 57.14 | 59.63 |
| CDX76899 | Canola | nucleus | 55.65 | 57.89 |
| GSMUA_Achr8P05170_001 | Banana | nucleus | 27.08 | 45.27 |
| GSMUA_Achr7P00800_001 | Banana | cytosol | 28.27 | 40.6 |
| GSMUA_Achr3P26180_001 | Banana | nucleus | 33.93 | 38.64 |
| GSMUA_Achr2P08590_001 | Banana | nucleus | 30.06 | 37.97 |
| CDX89627 | Canola | nucleus | 30.06 | 37.83 |
| CDX93135 | Canola | nucleus | 29.76 | 37.45 |
| GSMUA_Achr8P26460_001 | Banana | nucleus | 36.61 | 37.05 |
| GSMUA_Achr7P27600_001 | Banana | nucleus | 36.61 | 36.83 |
| GSMUA_Achr3P30620_001 | Banana | nucleus | 35.12 | 36.42 |
| VIT_00s0927g00010.t01 | Wine grape | nucleus | 24.4 | 35.96 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.93 | 35.4 |
| PGSC0003DMT400033757 | Potato | nucleus | 22.02 | 35.24 |
| GSMUA_Achr4P03160_001 | Banana | nucleus | 33.93 | 34.86 |
| GSMUA_Achr4P23070_001 | Banana | nucleus | 31.85 | 34.19 |
| KXG37671 | Sorghum | nucleus | 35.42 | 33.43 |
| Solyc05g009640.2.1 | Tomato | cytosol, nucleus, peroxisome | 23.21 | 33.33 |
| CDY13735 | Canola | nucleus | 28.57 | 33.22 |
| Os03t0725800-01 | Rice | nucleus | 34.82 | 32.59 |
| CDY52593 | Canola | nucleus | 27.38 | 32.28 |
| CDY52591 | Canola | nucleus | 30.06 | 32.06 |
| HORVU4Hr1G009440.2 | Barley | nucleus | 32.44 | 31.96 |
| Zm00001d033848_P004 | Maize | nucleus | 34.52 | 31.87 |
| CDX89512 | Canola | nucleus | 27.98 | 31.76 |
| CDY25630 | Canola | nucleus | 30.36 | 31.38 |
| CDY25629 | Canola | nucleus | 27.98 | 31.33 |
| CDX89513 | Canola | nucleus | 30.06 | 31.08 |
| TraesCS4B01G056600.2 | Wheat | nucleus | 34.23 | 30.75 |
| TraesCS4D01G056900.2 | Wheat | nucleus | 34.23 | 30.67 |
| Solyc02g091810.1.1 | Tomato | nucleus | 28.87 | 30.5 |
| TraesCS4A01G257900.2 | Wheat | nucleus | 33.93 | 30.24 |
| PGSC0003DMT400078698 | Potato | nucleus | 18.75 | 30.14 |
| Zm00001d013370_P001 | Maize | plastid | 33.33 | 30.03 |
| KRH42021 | Soybean | nucleus | 17.26 | 29.74 |
| Solyc02g091820.1.1 | Tomato | nucleus | 28.57 | 29.45 |
| VIT_00s0384g00020.t01 | Wine grape | nucleus | 17.26 | 29.44 |
| PGSC0003DMT400078699 | Potato | nucleus | 27.98 | 29.1 |
| Solyc06g064580.1.1 | Tomato | nucleus | 25.89 | 28.62 |
| Solyc06g064590.1.1 | Tomato | nucleus | 23.21 | 27.76 |
| CDX77696 | Canola | nucleus | 8.63 | 24.17 |
| GSMUA_Achr4P14580_001 | Banana | nucleus | 22.92 | 23.19 |
| GSMUA_Achr4P03170_001 | Banana | nucleus | 22.32 | 21.99 |
| CDY70013 | Canola | nucleus | 15.18 | 20.24 |
| CDX77699 | Canola | nucleus | 13.99 | 17.34 |
| CDY33482 | Canola | nucleus | 13.99 | 17.34 |
| CDY26910 | Canola | nucleus | 19.64 | 14.9 |
| CDX73261 | Canola | nucleus | 19.64 | 14.9 |
| CDY72121 | Canola | nucleus | 13.39 | 14.61 |
| CDX77688 | Canola | nucleus | 19.35 | 14.38 |
| CDY58502 | Canola | nucleus | 18.45 | 13.81 |
| CDX84081 | Canola | nucleus | 21.73 | 13.8 |
| CDY27319 | Canola | nucleus | 16.96 | 12.87 |
| CDY03185 | Canola | nucleus | 17.86 | 12.69 |
| CDY66312 | Canola | nucleus | 17.26 | 12.66 |
| CDY35183 | Canola | nucleus | 18.45 | 12.23 |
| CDY03195 | Canola | nucleus | 19.64 | 12.11 |
| CDY56874 | Canola | nucleus | 17.56 | 12.02 |
| CDY59973 | Canola | nucleus | 18.15 | 11.98 |
| CDY35179 | Canola | nucleus | 19.94 | 11.92 |
| CDX78808 | Canola | nucleus | 20.24 | 11.74 |
| CDY44507 | Canola | nucleus | 20.24 | 11.6 |
| CDY03183 | Canola | nucleus | 17.56 | 11.59 |
| CDX80023 | Canola | nucleus | 16.67 | 11.5 |
| CDY34468 | Canola | nucleus | 15.18 | 11.31 |
| CDX90021 | Canola | nucleus | 18.15 | 11.3 |
| CDY32242 | Canola | nucleus | 14.58 | 10.86 |
| CDX90525 | Canola | nucleus | 13.99 | 10.31 |
| CDY70506 | Canola | nucleus | 16.07 | 10.11 |
| CDX91907 | Canola | nucleus | 16.07 | 9.93 |
| CDX86891 | Canola | nucleus | 14.88 | 9.6 |
| CDX99505 | Canola | nucleus | 14.88 | 9.6 |
| CDY07214 | Canola | mitochondrion, nucleus | 15.18 | 9.41 |
| CDY25513 | Canola | nucleus | 16.07 | 9.36 |
| CDY58950 | Canola | nucleus | 16.07 | 9.36 |
| CDY39747 | Canola | nucleus | 15.48 | 9.3 |
| CDY51155 | Canola | mitochondrion, nucleus | 14.88 | 9.23 |
| CDY34367 | Canola | nucleus | 16.07 | 9.06 |
| CDY09695 | Canola | nucleus | 13.1 | 9.03 |
| CDY08314 | Canola | nucleus | 16.07 | 8.93 |
| CDX77694 | Canola | nucleus | 3.27 | 4.35 |
| CDY70012 | Canola | nucleus | 3.27 | 4.12 |
| CDY45357 | Canola | cytosol, golgi, nucleus | 2.08 | 3.68 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | GO:A0A078CHZ7 | EnsemblPlants:CDX75679 | ProteinID:CDX75679 |
| ProteinID:CDX75679.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | EnsemblPlantsGene:GSBRNA2T00121613001 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR23042 |
| PANTHER:PTHR23042:SF100 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0002546417 | InterPro:bHLH_dom | SEG:seg |
Description
BnaA01g00230D
Coordinates
chrLK031804:-:2328420..2329729
Molecular Weight (calculated)
38169.8 Da
IEP (calculated)
8.005
GRAVY (calculated)
-0.562
Length
336 amino acids
Sequence
(BLAST)
(BLAST)
001: MFSTRWFSEQ ELEENSIIQQ YQMNSRVGEI HEAQHNLPHS FSTLMAPTND PSYDDLIEIK PSKILKTTYI SPKLPPPPSF PLPPNSKTYL HHQPSSRILS
101: FENASPNGMD HEYAPTYLDS FINPKVEDGV PPNRMNEPIN RKGTKRAQPL CRNQTNAQDH IIAERKRREK LTQRFVALSA LVPGLKKMDK ASVLGDALKH
201: IKYLQERVGE FEEQKRERRL ESVVLVKKSK LILDDNNQSS SSSCCEDGSS GLELPEIEVK FSDKDVLIKI LCEKQKGHVA KIMAEIEKFN FSITNSSVLP
301: FGPTLDITII AKKESDFDMT LMDVVKSLRS ALSKFL
101: FENASPNGMD HEYAPTYLDS FINPKVEDGV PPNRMNEPIN RKGTKRAQPL CRNQTNAQDH IIAERKRREK LTQRFVALSA LVPGLKKMDK ASVLGDALKH
201: IKYLQERVGE FEEQKRERRL ESVVLVKKSK LILDDNNQSS SSSCCEDGSS GLELPEIEVK FSDKDVLIKI LCEKQKGHVA KIMAEIEKFN FSITNSSVLP
301: FGPTLDITII AKKESDFDMT LMDVVKSLRS ALSKFL
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.