Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58950 | Canola | nucleus | 96.78 | 93.76 |
| Bra025508.1-P | Field mustard | nucleus | 99.64 | 88.55 |
| CDY45357 | Canola | cytosol, golgi, nucleus | 28.09 | 82.63 |
| AT5G41315.2 | Thale cress | nucleus | 87.12 | 75.5 |
| CDY25513 | Canola | nucleus | 68.52 | 66.38 |
| CDY34367 | Canola | nucleus | 69.05 | 64.77 |
| CDY08314 | Canola | nucleus | 69.77 | 64.46 |
| CDY72121 | Canola | nucleus | 34.7 | 62.99 |
| GSMUA_Achr11P... | Banana | nucleus | 40.61 | 48.2 |
| VIT_02s0025g03450.t01 | Wine grape | nucleus | 52.77 | 46.97 |
| GSMUA_Achr8P11430_001 | Banana | nucleus | 41.86 | 42.86 |
| GSMUA_Achr11P... | Banana | nucleus | 41.5 | 42.03 |
| Solyc08g081140.2.1 | Tomato | nucleus | 46.69 | 41.69 |
| GSMUA_Achr11P... | Banana | nucleus | 41.14 | 38.79 |
| GSMUA_Achr5P20600_001 | Banana | nucleus | 38.28 | 36.39 |
| CDY07214 | Canola | mitochondrion, nucleus | 34.88 | 35.98 |
| CDY51155 | Canola | mitochondrion, nucleus | 34.88 | 35.98 |
| CDY70506 | Canola | nucleus | 34.17 | 35.77 |
| CDX91907 | Canola | nucleus | 34.17 | 35.11 |
| PGSC0003DMT400032140 | Potato | nucleus | 21.11 | 32.78 |
| CDX86891 | Canola | nucleus | 28.8 | 30.9 |
| CDX99505 | Canola | nucleus | 28.62 | 30.71 |
| CDX77694 | Canola | nucleus | 11.09 | 24.51 |
| CDY70012 | Canola | nucleus | 11.45 | 23.97 |
| CDY27319 | Canola | nucleus | 18.07 | 22.8 |
| CDX77688 | Canola | nucleus | 18.43 | 22.79 |
| CDY58502 | Canola | nucleus | 18.25 | 22.72 |
| CDY66312 | Canola | nucleus | 18.07 | 22.05 |
| CDX77696 | Canola | nucleus | 4.65 | 21.67 |
| CDY56874 | Canola | nucleus | 18.25 | 20.77 |
| CDX80023 | Canola | nucleus | 18.07 | 20.74 |
| CDX77699 | Canola | nucleus | 10.02 | 20.66 |
| CDY03185 | Canola | nucleus | 16.99 | 20.08 |
| CDY34468 | Canola | nucleus | 16.1 | 19.96 |
| CDY59973 | Canola | nucleus | 18.07 | 19.84 |
| CDY03195 | Canola | nucleus | 19.32 | 19.82 |
| CDY26910 | Canola | nucleus | 15.56 | 19.64 |
| CDX73261 | Canola | nucleus | 15.56 | 19.64 |
| CDY33482 | Canola | nucleus | 9.48 | 19.56 |
| CDX90525 | Canola | nucleus | 15.92 | 19.52 |
| CDY32242 | Canola | nucleus | 15.74 | 19.51 |
| CDY03183 | Canola | nucleus | 17.71 | 19.45 |
| CDX90021 | Canola | nucleus | 18.78 | 19.44 |
| CDY35183 | Canola | nucleus | 17.53 | 19.33 |
| CDY35179 | Canola | nucleus | 19.32 | 19.22 |
| CDX89627 | Canola | nucleus | 8.94 | 18.73 |
| CDX93135 | Canola | nucleus | 8.77 | 18.35 |
| CDX78808 | Canola | nucleus | 18.6 | 17.96 |
| CDY44507 | Canola | nucleus | 18.78 | 17.92 |
| CDY13737 | Canola | nucleus | 9.3 | 17.63 |
| CDX76899 | Canola | nucleus | 10.02 | 17.34 |
| CDY09695 | Canola | nucleus | 15.03 | 17.25 |
| CDX89512 | Canola | nucleus | 9.12 | 17.23 |
| CDY25629 | Canola | nucleus | 9.12 | 17.0 |
| CDX84081 | Canola | nucleus | 15.21 | 16.07 |
| CDY13735 | Canola | nucleus | 8.23 | 15.92 |
| CDY70013 | Canola | nucleus | 7.16 | 15.87 |
| CDX69336 | Canola | nucleus | 9.48 | 15.68 |
| CDY25628 | Canola | nucleus | 8.94 | 15.53 |
| CDX75679 | Canola | nucleus | 9.3 | 15.48 |
| CDY52593 | Canola | nucleus | 7.87 | 15.44 |
| CDX89511 | Canola | nucleus | 8.77 | 15.26 |
| CDY72199 | Canola | nucleus | 8.94 | 14.97 |
| CDY49678 | Canola | nucleus | 8.94 | 14.97 |
| CDY52591 | Canola | nucleus | 8.41 | 14.92 |
| CDX89513 | Canola | nucleus | 8.41 | 14.46 |
| CDY25630 | Canola | nucleus | 8.23 | 14.15 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078HPG4 | UniProt:A0A078HPG4 | EnsemblPlants:CDY39747 | ProteinID:CDY39747 |
| ProteinID:CDY39747.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00068536001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MYC/MYB_N | PFAM:PF00010 |
| PFAM:PF14215 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF28 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0004EE12BC | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
BnaA04g11060DBnaA04g11060D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HPG4]
Coordinates
chrLK032456:-:226053..229127
Molecular Weight (calculated)
62118.6 Da
IEP (calculated)
6.081
GRAVY (calculated)
-0.346
Length
559 amino acids
Sequence
(BLAST)
(BLAST)
001: MVTGQNRTSV PENLKKQLAV SIRSIQWSYA IFWSVSASQP GVLEWGDGYY NGDIKTRKTI QASEIKADQL GLRRSEQLRE LFESLSIAES SSTGTAVGSQ
101: VSRRASAAAL SPEDLADTEW YYLVCMSFVF KIGEGMPGRT FANGEPIWLC NAGTADSKVF SRSLLAKSAS VNTVICFPFL GGVVEIGTTE HIAEDMNVIQ
201: CVKKSFLEAP DPNASILQPI SSDYHIDNVL DPQHILGDEI YAPMFGTRPF QATSPTRTTN GFDPEHDQLA EDHDSFMAEG INSQKNVKML SFDPRNDDVH
301: YQSVISTIFK TSHQLILGPQ FRNCDKRSSF TRWKKPSPSS SGTASIVAPS QGMLKKIIFE VPRVHQKEKL MLDSPVAGDE TANHAVSEKK RREKLNERFL
401: ILRSIIPSVN KSDKVSILDD TIEYLQELER RVQELESCRE STDTETRERT SANCTNNEIG YVKRTHVGEA EPAETGLTDN LRIRSFGNEV VIELRCVWRE
501: GVLLEIMDVI SNLHLDSHSV QSSTGDGLLC LTVSCKHKGS KIATPGMIKE ALQKVAWIC
101: VSRRASAAAL SPEDLADTEW YYLVCMSFVF KIGEGMPGRT FANGEPIWLC NAGTADSKVF SRSLLAKSAS VNTVICFPFL GGVVEIGTTE HIAEDMNVIQ
201: CVKKSFLEAP DPNASILQPI SSDYHIDNVL DPQHILGDEI YAPMFGTRPF QATSPTRTTN GFDPEHDQLA EDHDSFMAEG INSQKNVKML SFDPRNDDVH
301: YQSVISTIFK TSHQLILGPQ FRNCDKRSSF TRWKKPSPSS SGTASIVAPS QGMLKKIIFE VPRVHQKEKL MLDSPVAGDE TANHAVSEKK RREKLNERFL
401: ILRSIIPSVN KSDKVSILDD TIEYLQELER RVQELESCRE STDTETRERT SANCTNNEIG YVKRTHVGEA EPAETGLTDN LRIRSFGNEV VIELRCVWRE
501: GVLLEIMDVI SNLHLDSHSV QSSTGDGLLC LTVSCKHKGS KIATPGMIKE ALQKVAWIC
001: MDEETMATGQ NRTTVPENLK KHLAVSVRNI QWSYGIFWSV SASQSGVLEW GDGYYNGDIK TRKTIQASEI KADQLGLRRS EQLSELYESL SVAESSSSGV
101: AAGSQVTRRA SAAALSPEDL ADTEWYYLVC MSFVFNIGEG MPGRTFANGE PIWLCNAHTA DSKVFSRSLL AKSAAVKTVV CFPFLGGVVE IGTTEHITED
201: MNVIQCVKTS FLEAPDPYAT ILPARSDYHI DNVLDPQQIL GDEIYAPMFS TEPFPTASPS RTTNGFDQEH EQVADDHDSF MTERITGGAS QVQSWQLMDD
301: ELSNCVHQSL NSSDCVSQTF VEGAAGRVAY GARKSRVQRL GQIQEQQRNV KTLSFDPRND DVHYQSVIST IFKTNHQLIL GPQFRNCDKQ SSFTRWKKSS
401: SSSSGTATVT APSQGMLKKI IFDVPRVHQK EKLMLDSPEA RDETGNHAVL EKKRREKLNE RFMTLRKIIP SINKIDKVSI LDDTIEYLQE LERRVQELES
501: CRESTDTETR GTMTMKRKKP CDAGERTSAN CANNETGNGK KVSVNNVGEA EPADTGFTGL TDNLRIGSFG NEVVIELRCA WREGVLLEIM DVISDLHLDS
601: HSVQSSTGDG LLCLTVNCKH KGSKIATPGM IKEALQRVAW IC
101: AAGSQVTRRA SAAALSPEDL ADTEWYYLVC MSFVFNIGEG MPGRTFANGE PIWLCNAHTA DSKVFSRSLL AKSAAVKTVV CFPFLGGVVE IGTTEHITED
201: MNVIQCVKTS FLEAPDPYAT ILPARSDYHI DNVLDPQQIL GDEIYAPMFS TEPFPTASPS RTTNGFDQEH EQVADDHDSF MTERITGGAS QVQSWQLMDD
301: ELSNCVHQSL NSSDCVSQTF VEGAAGRVAY GARKSRVQRL GQIQEQQRNV KTLSFDPRND DVHYQSVIST IFKTNHQLIL GPQFRNCDKQ SSFTRWKKSS
401: SSSSGTATVT APSQGMLKKI IFDVPRVHQK EKLMLDSPEA RDETGNHAVL EKKRREKLNE RFMTLRKIIP SINKIDKVSI LDDTIEYLQE LERRVQELES
501: CRESTDTETR GTMTMKRKKP CDAGERTSAN CANNETGNGK KVSVNNVGEA EPADTGFTGL TDNLRIGSFG NEVVIELRCA WREGVLLEIM DVISDLHLDS
601: HSVQSSTGDG LLCLTVNCKH KGSKIATPGM IKEALQRVAW IC
Arabidopsis Description
GL3Basic helix-loop-helix (BHLH) DNA-binding superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1R7T3F7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.