Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX77688 | Canola | nucleus | 97.33 | 96.68 |
| Bra024998.1-P | Field mustard | nucleus | 100.0 | 77.41 |
| CDY03195 | Canola | nucleus | 84.19 | 69.36 |
| CDY35179 | Canola | nucleus | 86.41 | 69.04 |
| AT5G46760.1 | Thale cress | nucleus | 84.63 | 64.19 |
| CDX78808 | Canola | nucleus | 69.93 | 54.23 |
| CDY44507 | Canola | nucleus | 69.04 | 52.9 |
| CDX73261 | Canola | nucleus | 51.0 | 51.69 |
| CDY26910 | Canola | nucleus | 50.78 | 51.47 |
| Solyc08g005050.2.1 | Tomato | nucleus | 49.67 | 48.06 |
| CDX77696 | Canola | nucleus | 12.69 | 47.5 |
| CDX84081 | Canola | nucleus | 55.9 | 47.45 |
| CDY03185 | Canola | nucleus | 46.77 | 44.4 |
| VIT_02s0012g01320.t01 | Wine grape | nucleus | 65.26 | 44.19 |
| PGSC0003DMT400002963 | Potato | nucleus | 58.8 | 44.15 |
| KRH75613 | Soybean | nucleus | 61.69 | 43.49 |
| KRH45440 | Soybean | nucleus | 61.25 | 42.05 |
| KRH74418 | Soybean | nucleus | 59.91 | 41.9 |
| CDY35183 | Canola | nucleus | 47.22 | 41.81 |
| Solyc08g076930.1.1 | Tomato | nucleus | 63.03 | 41.07 |
| CDY59973 | Canola | nucleus | 46.55 | 41.06 |
| CDY03183 | Canola | nucleus | 46.55 | 41.06 |
| CDX77699 | Canola | nucleus | 24.5 | 40.59 |
| CDY33482 | Canola | nucleus | 24.28 | 40.22 |
| PGSC0003DMT400045204 | Potato | nucleus | 62.14 | 40.2 |
| KRH39540 | Soybean | nucleus | 61.47 | 37.76 |
| CDY70013 | Canola | nucleus | 19.6 | 34.92 |
| CDX77694 | Canola | nucleus | 19.38 | 34.39 |
| CDY27319 | Canola | nucleus | 32.29 | 32.73 |
| CDY66312 | Canola | nucleus | 32.07 | 31.44 |
| CDX80023 | Canola | nucleus | 31.85 | 29.36 |
| CDY56874 | Canola | nucleus | 31.85 | 29.12 |
| CDX90021 | Canola | nucleus | 33.41 | 27.78 |
| CDY34468 | Canola | nucleus | 27.39 | 27.27 |
| CDY32242 | Canola | nucleus | 27.39 | 27.27 |
| CDX90525 | Canola | nucleus | 26.73 | 26.32 |
| CDY45357 | Canola | cytosol, golgi, nucleus | 10.47 | 24.74 |
| CDY09695 | Canola | nucleus | 24.5 | 22.59 |
| CDY70012 | Canola | nucleus | 12.92 | 21.72 |
| CDX93135 | Canola | nucleus | 12.69 | 21.35 |
| CDX89627 | Canola | nucleus | 12.69 | 21.35 |
| CDX76899 | Canola | nucleus | 14.92 | 20.74 |
| CDX86891 | Canola | nucleus | 23.83 | 20.54 |
| CDX99505 | Canola | nucleus | 23.83 | 20.54 |
| CDY13737 | Canola | nucleus | 13.36 | 20.34 |
| CDY25628 | Canola | nucleus | 14.03 | 19.57 |
| CDX89511 | Canola | nucleus | 13.81 | 19.31 |
| CDY49678 | Canola | nucleus | 14.25 | 19.16 |
| CDY72199 | Canola | nucleus | 14.03 | 18.86 |
| CDX75679 | Canola | nucleus | 13.81 | 18.45 |
| CDY39747 | Canola | nucleus | 22.72 | 18.25 |
| CDY25513 | Canola | nucleus | 23.39 | 18.2 |
| CDX69336 | Canola | nucleus | 13.59 | 18.05 |
| CDX89512 | Canola | nucleus | 11.8 | 17.91 |
| CDY58950 | Canola | nucleus | 22.94 | 17.85 |
| CDY72121 | Canola | nucleus | 11.8 | 17.21 |
| CDY34367 | Canola | nucleus | 22.72 | 17.11 |
| CDY13735 | Canola | nucleus | 10.91 | 16.95 |
| CDY08314 | Canola | nucleus | 22.72 | 16.86 |
| CDY52593 | Canola | nucleus | 10.69 | 16.84 |
| CDY25629 | Canola | nucleus | 11.14 | 16.67 |
| CDY70506 | Canola | nucleus | 19.15 | 16.1 |
| CDX89513 | Canola | nucleus | 11.58 | 16.0 |
| CDY52591 | Canola | nucleus | 11.14 | 15.87 |
| CDY07214 | Canola | mitochondrion, nucleus | 19.15 | 15.87 |
| CDX91907 | Canola | nucleus | 19.15 | 15.81 |
| CDY51155 | Canola | mitochondrion, nucleus | 18.71 | 15.5 |
| CDY25630 | Canola | nucleus | 11.14 | 15.38 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | GO:A0A078J098 | UniProt:A0A078J098 | EnsemblPlants:CDY58502 | ProteinID:CDY58502 |
| ProteinID:CDY58502.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| EnsemblPlantsGene:GSBRNA2T00023683001 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | InterPro:MYC/MYB_N | PFAM:PF00010 |
| PFAM:PF14215 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF43 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0004EE98C0 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
BnaA06g40330DBnaA06g40330D protein [Source:UniProtKB/TrEMBL;Acc:A0A078J098]
Coordinates
chrLK033674:+:21304..23794
Molecular Weight (calculated)
49644.2 Da
IEP (calculated)
5.399
GRAVY (calculated)
-0.604
Length
449 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDYFLNEST PPGDNASTAM EAFIGTNHSS LWPQPPVPTP SLSQFNEDTL QQRLQALIES AGEKWTYAIF WQISHDFESP AGDNAVVLGW GDGYYKGEED
101: KEKKKKSSNS NPAEQEHRKR EVTDTEWFFL VSMTQSFANG VGLPGESFLN SRVIWLSGSG ALTGSGCERA NQGQIYGLQT MVCIAAENGV VELGSSEAIS
201: QSSDLMDKVN SLFNSSNGML SFSTVVRSTA KSGESDHSDL EASVVKEAIV VEPEKKPRKR GRKPANGREE PLNHVEAERQ RREKLNQRFY SLRAVVPNVS
301: KMDKASLLGD AISYINELKS KLQQAESEKE EIQKQLDGMS KEGNGKSGAS RAVKERRSSY QDSASSVEME IDVKIIGWDV MIRVQCSKKN HPGSRFMDAL
401: KELDLEVNHA SLSVVNDLMI QQATVKMGSQ FFNHDQLRAA LMLKVGGDN
101: KEKKKKSSNS NPAEQEHRKR EVTDTEWFFL VSMTQSFANG VGLPGESFLN SRVIWLSGSG ALTGSGCERA NQGQIYGLQT MVCIAAENGV VELGSSEAIS
201: QSSDLMDKVN SLFNSSNGML SFSTVVRSTA KSGESDHSDL EASVVKEAIV VEPEKKPRKR GRKPANGREE PLNHVEAERQ RREKLNQRFY SLRAVVPNVS
301: KMDKASLLGD AISYINELKS KLQQAESEKE EIQKQLDGMS KEGNGKSGAS RAVKERRSSY QDSASSVEME IDVKIIGWDV MIRVQCSKKN HPGSRFMDAL
401: KELDLEVNHA SLSVVNDLMI QQATVKMGSQ FFNHDQLRAA LMLKVGGDN
001: MYNLTFSPSL SSSLLSFTQQ TPAAIVSSSP PDLVLQQKLR FVVETSPDRW AYVIFWQKMF DDQSDRSYLV WVDGHFCGNK NNNSQENYTT NSIECELMMD
101: GGDDLELFYA ASFYGEDRSP RKEVSDESLV WLTGPDELRF SNYERAKEAG FHGVHTLVSI PINNGIIELG SSESIIQNRN FINRVKSIFG SGKTTKHTNQ
201: TGSYPKPAVS DHSKSGNQQF GSERKRRRKL ETTRVAAATK EKHHPAVLSH VEAEKQRREK LNHRFYALRA IVPKVSRMDK ASLLSDAVSY IESLKSKIDD
301: LETEIKKMKM TETDKLDNSS SNTSPSSVEY QVNQKPSKSN RGSDLEVQVK IVGEEAIIRV QTENVNHPTS ALMSALMEMD CRVQHANASR LSQVMVQDVV
401: VLVPEGLRSE DRLRTTLVRT LSL
101: GGDDLELFYA ASFYGEDRSP RKEVSDESLV WLTGPDELRF SNYERAKEAG FHGVHTLVSI PINNGIIELG SSESIIQNRN FINRVKSIFG SGKTTKHTNQ
201: TGSYPKPAVS DHSKSGNQQF GSERKRRRKL ETTRVAAATK EKHHPAVLSH VEAEKQRREK LNHRFYALRA IVPKVSRMDK ASLLSDAVSY IESLKSKIDD
301: LETEIKKMKM TETDKLDNSS SNTSPSSVEY QVNQKPSKSN RGSDLEVQVK IVGEEAIIRV QTENVNHPTS ALMSALMEMD CRVQHANASR LSQVMVQDVV
401: VLVPEGLRSE DRLRTTLVRT LSL
Arabidopsis Description
BHLH14Transcription factor bHLH14 [Source:UniProtKB/Swiss-Prot;Acc:O23090]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.