Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY58502 | Canola | nucleus | 77.41 | 100.0 |
| CDX77688 | Canola | nucleus | 75.34 | 96.68 |
| Bra017527.1-P | Field mustard | nucleus | 35.0 | 89.82 |
| AT5G46760.1 | Thale cress | nucleus | 78.79 | 77.2 |
| Bra013263.1-P | Field mustard | nucleus | 32.07 | 68.63 |
| Bra013264.1-P | Field mustard | nucleus | 31.55 | 61.62 |
| Solyc08g005050.2.1 | Tomato | nucleus | 42.93 | 53.66 |
| Bra010178.1-P | Field mustard | nucleus | 53.62 | 51.83 |
| VIT_02s0012g01320.t01 | Wine grape | nucleus | 58.97 | 51.58 |
| PGSC0003DMT400002963 | Potato | nucleus | 52.59 | 51.0 |
| KRH75613 | Soybean | nucleus | 54.31 | 49.45 |
| KRH45440 | Soybean | nucleus | 54.14 | 48.01 |
| KRH74418 | Soybean | nucleus | 52.93 | 47.82 |
| Solyc08g076930.1.1 | Tomato | nucleus | 56.21 | 47.31 |
| PGSC0003DMT400045204 | Potato | nucleus | 55.86 | 46.69 |
| Bra017520.1-P | Field mustard | nucleus | 37.76 | 43.98 |
| Bra017523.1-P | Field mustard | nucleus | 38.1 | 43.59 |
| KRH39540 | Soybean | nucleus | 54.66 | 43.37 |
| Bra024992.1-P | Field mustard | nucleus | 19.48 | 41.7 |
| HORVU1Hr1G050560.1 | Barley | nucleus | 47.59 | 40.35 |
| TraesCS1B01G208000.1 | Wheat | nucleus | 47.76 | 39.97 |
| TraesCS1D01G196900.1 | Wheat | nucleus | 47.76 | 39.86 |
| Zm00001d030028_P001 | Maize | nucleus | 48.28 | 39.72 |
| Zm00001d047017_P001 | Maize | nucleus | 47.93 | 39.54 |
| Bra024993.1-P | Field mustard | nucleus | 25.69 | 39.52 |
| KXG39194 | Sorghum | nucleus | 48.1 | 39.46 |
| Os10t0575000-01 | Rice | nucleus | 47.24 | 39.2 |
| HORVU0Hr1G025420.1 | Barley | cytosol, nucleus | 10.86 | 38.41 |
| TraesCS1A01G193200.1 | Wheat | nucleus | 45.69 | 38.24 |
| Zm00001d031717_P001 | Maize | nucleus | 15.34 | 35.04 |
| TraesCS5B01G306600.1 | Wheat | nucleus | 16.38 | 34.8 |
| Zm00001d052728_P001 | Maize | nucleus | 16.38 | 34.55 |
| HORVU5Hr1G080040.1 | Barley | nucleus | 15.86 | 34.33 |
| TraesCS5D01G313400.1 | Wheat | nucleus | 16.03 | 34.07 |
| HORVU5Hr1G080080.1 | Barley | nucleus, plastid | 12.24 | 33.81 |
| TraesCS5A01G306200.1 | Wheat | nucleus | 16.21 | 33.69 |
| TraesCS5D01G313500.1 | Wheat | nucleus | 16.21 | 33.69 |
| TraesCS5A01G306400.1 | Wheat | nucleus | 12.93 | 33.63 |
| TraesCS1D01G374800.1 | Wheat | nucleus | 15.34 | 33.58 |
| KXG25462 | Sorghum | nucleus | 16.03 | 33.45 |
| TraesCS5A01G306500.1 | Wheat | nucleus | 16.21 | 33.45 |
| TraesCS5D01G313600.1 | Wheat | nucleus | 16.03 | 33.33 |
| TraesCS5B01G307000.1 | Wheat | nucleus | 16.03 | 33.33 |
| TraesCS5D01G313700.1 | Wheat | nucleus | 15.69 | 33.09 |
| OQU80778 | Sorghum | nucleus | 15.34 | 32.96 |
| TraesCS5A01G306700.1 | Wheat | peroxisome | 15.52 | 32.85 |
| TraesCS1A01G369200.1 | Wheat | nucleus | 11.21 | 32.83 |
| TraesCS5A01G306600.1 | Wheat | nucleus | 15.52 | 32.73 |
| Bra039279.1-P | Field mustard | nucleus | 25.86 | 32.68 |
| TraesCS2B01G469200.1 | Wheat | nucleus | 13.79 | 32.52 |
| TraesCSU01G222600.1 | Wheat | nucleus | 13.79 | 32.52 |
| OQU75588 | Sorghum | nucleus | 14.66 | 32.32 |
| OQU80776 | Sorghum | nucleus | 14.66 | 32.32 |
| TraesCS5B01G307100.1 | Wheat | nucleus | 15.17 | 32.23 |
| Os09t0519100-00 | Rice | nucleus | 14.66 | 32.2 |
| TraesCS2A01G448500.1 | Wheat | nucleus | 14.14 | 32.03 |
| Zm00001d006150_P001 | Maize | nucleus | 16.03 | 31.96 |
| EER97058 | Sorghum | cytosol, nucleus, plastid | 15.17 | 31.88 |
| TraesCS5B01G306800.1 | Wheat | nucleus | 15.34 | 31.79 |
| TraesCS2B01G469300.1 | Wheat | nucleus | 13.97 | 31.64 |
| Os08t0543700-00 | Rice | nucleus, peroxisome, plastid | 14.31 | 31.56 |
| EER99201 | Sorghum | nucleus | 16.03 | 31.42 |
| TraesCS1B01G387900.1 | Wheat | nucleus | 12.93 | 31.38 |
| OQU86344 | Sorghum | nucleus | 13.79 | 31.25 |
| Bra004532.1-P | Field mustard | nucleus | 25.86 | 30.86 |
| TraesCS7D01G102200.1 | Wheat | nucleus | 13.45 | 30.47 |
| HORVU5Hr1G079900.1 | Barley | cytosol | 14.14 | 30.37 |
| Zm00001d021164_P001 | Maize | nucleus | 15.0 | 30.0 |
| OQU80777 | Sorghum | nucleus | 14.48 | 30.0 |
| OQU80775 | Sorghum | cytosol, nucleus, peroxisome, plastid | 14.14 | 29.39 |
| Bra038458.1-P | Field mustard | nucleus | 22.07 | 28.38 |
| Bra012720.1-P | Field mustard | nucleus | 21.9 | 27.85 |
| Bra033273.1-P | Field mustard | nucleus | 27.93 | 27.74 |
| Bra039924.1-P | Field mustard | nucleus | 12.07 | 22.36 |
| Bra013128.1-P | Field mustard | nucleus | 10.0 | 21.72 |
| Bra037887.1-P | Field mustard | nucleus | 17.76 | 20.72 |
| Bra030210.1-P | Field mustard | nucleus | 11.21 | 20.19 |
| Bra010617.1-P | Field mustard | nucleus | 11.38 | 19.76 |
| Bra011790.1-P | Field mustard | nucleus | 11.38 | 19.64 |
| Bra027653.1-P | Field mustard | nucleus | 18.97 | 18.46 |
| Bra027796.1-P | Field mustard | nucleus | 19.14 | 18.32 |
| Bra025508.1-P | Field mustard | nucleus | 19.66 | 18.12 |
| Bra030208.1-P | Field mustard | nucleus | 9.14 | 17.43 |
| Bra039926.1-P | Field mustard | nucleus | 8.45 | 16.9 |
| Bra039927.1-P | Field mustard | nucleus | 8.79 | 16.14 |
| Bra030207.1-P | Field mustard | nucleus | 8.79 | 15.64 |
| Bra000970.1-P | Field mustard | nucleus | 16.03 | 14.22 |
| Bra037343.1-P | Field mustard | cytosol | 14.31 | 11.67 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EnsemblPlantsGene:Bra024998 | EnsemblPlants:Bra024998.1 | EnsemblPlants:Bra024998.1-P | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | UniProt:M4E892 | InterPro:MYC/MYB_N | PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 |
| PANTHER:PTHR11514 | PANTHER:PTHR11514:SF43 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000253FB6D | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
AT5G46760 (E=2e-213) | basic helix-loop-helix (bHLH) family protein
Coordinates
chrA06:-:24606577..24608319
Molecular Weight (calculated)
63515.8 Da
IEP (calculated)
4.894
GRAVY (calculated)
-0.683
Length
580 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDYFLNEST PPGDNASTAM EAFIGTNHSS LWPQPPVPTP SLSQFNEDTL QQRLQALIES AGEKWTYAIF WQISHDFESP AGDNAVVLGW GDGYYKGEED
101: KEKKKKSSNS NPAEQEHRKR VIRELNSLIS GGGGGGGGVG VSDESNDEEV TDTEWFFLVS MTQSFANGVG LPGESFLNSR VIWLSGSGAL TGSGCERANQ
201: GQIYGLQTMV CIAAENGVVE LGSSEAISQS SDLMDKVNSL FNSSNGNGGE ASSWGFGLNP DQGENDPALW ITEPAIEPVQ SGSHKLEKNE SSVENPRKNH
301: QNPFLVEQDF NFQAGSSKMM KPSETLSFTA EEGNKRRSPV SKGSNNEEGM LSFSTVVRST AKSGESDHSD LEASVVKEAI VVEPEKKPRK RGRKPANGRE
401: EPLNHVEAER QRREKLNQRF YSLRAVVPNV SKMDKASLLG DAISYINELK SKLQQAESEK EEIQKQLDGM SKEGNGKSGA SRAVKERRSS YQDSASSVEM
501: EIDVKIIGWD VMIRVQCSKK NHPGSRFMDA LKELDLEVNH ASLSVVNDLM IQQATVKMGS QFFNHDQLRA ALMLKVGGDN
101: KEKKKKSSNS NPAEQEHRKR VIRELNSLIS GGGGGGGGVG VSDESNDEEV TDTEWFFLVS MTQSFANGVG LPGESFLNSR VIWLSGSGAL TGSGCERANQ
201: GQIYGLQTMV CIAAENGVVE LGSSEAISQS SDLMDKVNSL FNSSNGNGGE ASSWGFGLNP DQGENDPALW ITEPAIEPVQ SGSHKLEKNE SSVENPRKNH
301: QNPFLVEQDF NFQAGSSKMM KPSETLSFTA EEGNKRRSPV SKGSNNEEGM LSFSTVVRST AKSGESDHSD LEASVVKEAI VVEPEKKPRK RGRKPANGRE
401: EPLNHVEAER QRREKLNQRF YSLRAVVPNV SKMDKASLLG DAISYINELK SKLQQAESEK EEIQKQLDGM SKEGNGKSGA SRAVKERRSS YQDSASSVEM
501: EIDVKIIGWD VMIRVQCSKK NHPGSRFMDA LKELDLEVNH ASLSVVNDLM IQQATVKMGS QFFNHDQLRA ALMLKVGGDN
001: MNGTTSSINF LTSDDDASAA AMEAFIGTNH HSSLFPPPPQ QPPQPQFNED TLQQRLQALI ESAGENWTYA IFWQISHDFD SSTGDNTVIL GWGDGYYKGE
101: EDKEKKKNNT NTAEQEHRKR VIRELNSLIS GGIGVSDESN DEEVTDTEWF FLVSMTQSFV NGVGLPGESF LNSRVIWLSG SGALTGSGCE RAGQGQIYGL
201: KTMVCIATQN GVVELGSSEV ISQSSDLMHK VNNLFNFNNG GGNNGVEASS WGFNLNPDQG ENDPALWISE PTNTGIESPA RVNNGNNSNS NSKSDSHQIS
301: KLEKNDISSV ENQNRQSSCL VEKDLTFQGG LLKSNETLSF CGNESSKKRT SVSKGSNNDE GMLSFSTVVR SAANDSDHSD LEASVVKEAI VVEPPEKKPR
401: KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYSLRAVVPN VSKMDKASLL GDAISYINEL KSKLQQAESD KEEIQKKLDG MSKEGNNGKG CGSRAKERKS
501: SNQDSTASSI EMEIDVKIIG WDVMIRVQCG KKDHPGARFM EALKELDLEV NHASLSVVND LMIQQATVKM GSQFFNHDQL KVALMTKVGE NY
101: EDKEKKKNNT NTAEQEHRKR VIRELNSLIS GGIGVSDESN DEEVTDTEWF FLVSMTQSFV NGVGLPGESF LNSRVIWLSG SGALTGSGCE RAGQGQIYGL
201: KTMVCIATQN GVVELGSSEV ISQSSDLMHK VNNLFNFNNG GGNNGVEASS WGFNLNPDQG ENDPALWISE PTNTGIESPA RVNNGNNSNS NSKSDSHQIS
301: KLEKNDISSV ENQNRQSSCL VEKDLTFQGG LLKSNETLSF CGNESSKKRT SVSKGSNNDE GMLSFSTVVR SAANDSDHSD LEASVVKEAI VVEPPEKKPR
401: KRGRKPANGR EEPLNHVEAE RQRREKLNQR FYSLRAVVPN VSKMDKASLL GDAISYINEL KSKLQQAESD KEEIQKKLDG MSKEGNNGKG CGSRAKERKS
501: SNQDSTASSI EMEIDVKIIG WDVMIRVQCG KKDHPGARFM EALKELDLEV NHASLSVVND LMIQQATVKM GSQFFNHDQL KVALMTKVGE NY
Arabidopsis Description
MYC3Transcription factor MYC3 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIP9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.