Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Bra010794.1-P | |
| Bra022254.1-P | |
| Bra025713.1-P | |
| Bra032362.1-P |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G32640.1 | Bra025713.1-P | AT1G19180.1 | 18547396 |
| AT1G32640.1 | Bra010794.1-P | AT1G30135.1 | 19309455 |
| AT1G32640.1 | Bra032362.1-P | AT1G30135.1 | 19309455 |
| AT1G32640.1 | Bra022254.1-P | AT3G17860.1 | 17637675 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26910 | Canola | nucleus | 73.0 | 98.87 |
| CDX73261 | Canola | nucleus | 72.0 | 97.52 |
| AT1G32640.1 | Thale cress | nucleus | 90.0 | 86.68 |
| Bra017527.1-P | Field mustard | nucleus | 23.0 | 61.06 |
| KRH75613 | Soybean | nucleus | 59.0 | 55.57 |
| VIT_02s0012g01320.t01 | Wine grape | nucleus | 60.83 | 55.05 |
| PGSC0003DMT400002963 | Potato | nucleus | 54.67 | 54.85 |
| Solyc08g005050.2.1 | Tomato | nucleus | 42.0 | 54.31 |
| Bra024998.1-P | Field mustard | nucleus | 51.83 | 53.62 |
| Bra017520.1-P | Field mustard | nucleus | 44.33 | 53.41 |
| KRH45440 | Soybean | nucleus | 58.17 | 53.36 |
| KRH74418 | Soybean | nucleus | 56.67 | 52.96 |
| Bra017523.1-P | Field mustard | nucleus | 44.0 | 52.07 |
| Bra013263.1-P | Field mustard | nucleus | 23.5 | 52.03 |
| Solyc08g076930.1.1 | Tomato | nucleus | 59.0 | 51.38 |
| PGSC0003DMT400045204 | Potato | nucleus | 59.33 | 51.3 |
| Bra013264.1-P | Field mustard | nucleus | 24.83 | 50.17 |
| Bra024992.1-P | Field mustard | nucleus | 22.17 | 49.08 |
| Bra024993.1-P | Field mustard | nucleus | 30.67 | 48.81 |
| KRH39540 | Soybean | nucleus | 58.5 | 48.02 |
| HORVU1Hr1G050560.1 | Barley | nucleus | 51.67 | 45.32 |
| TraesCS1D01G196900.1 | Wheat | nucleus | 51.83 | 44.75 |
| TraesCS1B01G208000.1 | Wheat | nucleus | 51.67 | 44.73 |
| Zm00001d030028_P001 | Maize | nucleus | 52.0 | 44.26 |
| KXG39194 | Sorghum | nucleus | 51.67 | 43.85 |
| Os10t0575000-01 | Rice | nucleus | 51.0 | 43.78 |
| TraesCS1A01G193200.1 | Wheat | nucleus | 49.83 | 43.15 |
| Zm00001d047017_P001 | Maize | nucleus | 50.5 | 43.1 |
| HORVU0Hr1G025420.1 | Barley | cytosol, nucleus | 10.0 | 36.59 |
| HORVU5Hr1G080040.1 | Barley | nucleus | 16.0 | 35.82 |
| TraesCS5A01G306500.1 | Wheat | nucleus | 16.67 | 35.59 |
| TraesCS5D01G313500.1 | Wheat | nucleus | 16.5 | 35.48 |
| TraesCS5D01G313600.1 | Wheat | nucleus | 16.5 | 35.48 |
| TraesCS5A01G306700.1 | Wheat | peroxisome | 16.17 | 35.4 |
| TraesCS5D01G313700.1 | Wheat | nucleus | 16.17 | 35.27 |
| HORVU5Hr1G080080.1 | Barley | nucleus, plastid | 12.33 | 35.24 |
| TraesCS5A01G306200.1 | Wheat | nucleus | 16.33 | 35.13 |
| TraesCS5B01G307000.1 | Wheat | nucleus | 16.33 | 35.13 |
| TraesCS5A01G306600.1 | Wheat | nucleus | 16.0 | 34.91 |
| Zm00001d031717_P001 | Maize | nucleus | 14.67 | 34.65 |
| TraesCS5A01G306400.1 | Wheat | nucleus | 12.83 | 34.53 |
| Bra039279.1-P | Field mustard | nucleus | 26.17 | 34.2 |
| Os09t0519100-00 | Rice | nucleus | 15.0 | 34.09 |
| TraesCS5B01G307100.1 | Wheat | nucleus | 15.33 | 33.7 |
| Zm00001d006150_P001 | Maize | nucleus | 16.33 | 33.68 |
| TraesCS5B01G306800.1 | Wheat | nucleus | 15.67 | 33.57 |
| OQU75588 | Sorghum | nucleus | 14.67 | 33.46 |
| OQU80776 | Sorghum | nucleus | 14.67 | 33.46 |
| TraesCS1A01G369200.1 | Wheat | nucleus | 11.0 | 33.33 |
| TraesCS5B01G306600.1 | Wheat | nucleus | 15.17 | 33.33 |
| KXG25462 | Sorghum | nucleus | 15.33 | 33.09 |
| Zm00001d052728_P001 | Maize | nucleus | 15.17 | 33.09 |
| EER97058 | Sorghum | cytosol, nucleus, plastid | 15.17 | 32.97 |
| TraesCS5D01G313400.1 | Wheat | nucleus | 15.0 | 32.97 |
| OQU86344 | Sorghum | nucleus | 14.0 | 32.81 |
| EER99201 | Sorghum | nucleus | 16.17 | 32.77 |
| TraesCS1D01G374800.1 | Wheat | nucleus | 14.33 | 32.45 |
| TraesCS2A01G448500.1 | Wheat | nucleus | 13.83 | 32.42 |
| Bra004532.1-P | Field mustard | nucleus | 26.17 | 32.3 |
| HORVU5Hr1G079900.1 | Barley | cytosol | 14.5 | 32.22 |
| TraesCS2B01G469200.1 | Wheat | nucleus | 13.17 | 32.11 |
| TraesCSU01G222600.1 | Wheat | nucleus | 13.17 | 32.11 |
| OQU80778 | Sorghum | nucleus | 14.33 | 31.85 |
| TraesCS2B01G469300.1 | Wheat | nucleus | 13.5 | 31.64 |
| Zm00001d021164_P001 | Maize | nucleus | 15.17 | 31.38 |
| Os08t0543700-00 | Rice | nucleus, peroxisome, plastid | 13.67 | 31.18 |
| Bra038458.1-P | Field mustard | nucleus | 23.17 | 30.82 |
| OQU80777 | Sorghum | nucleus | 14.17 | 30.36 |
| OQU80775 | Sorghum | cytosol, nucleus, peroxisome, plastid | 14.0 | 30.11 |
| TraesCS7D01G102200.1 | Wheat | nucleus | 12.67 | 29.69 |
| Bra012720.1-P | Field mustard | nucleus | 22.33 | 29.39 |
| TraesCS1B01G387900.1 | Wheat | nucleus | 11.67 | 29.29 |
| Bra033273.1-P | Field mustard | nucleus | 26.83 | 27.57 |
| Bra039924.1-P | Field mustard | nucleus | 12.0 | 23.0 |
| Bra013128.1-P | Field mustard | nucleus | 10.17 | 22.85 |
| Bra010617.1-P | Field mustard | nucleus | 12.33 | 22.16 |
| Bra011790.1-P | Field mustard | nucleus | 12.17 | 21.73 |
| Bra030210.1-P | Field mustard | nucleus | 11.5 | 21.43 |
| Bra037887.1-P | Field mustard | nucleus | 17.17 | 20.72 |
| Bra039927.1-P | Field mustard | nucleus | 10.0 | 18.99 |
| Bra030207.1-P | Field mustard | nucleus | 10.0 | 18.4 |
| Bra027653.1-P | Field mustard | nucleus | 17.83 | 17.95 |
| Bra027796.1-P | Field mustard | nucleus | 17.83 | 17.66 |
| Bra030208.1-P | Field mustard | nucleus | 8.83 | 17.43 |
| Bra025508.1-P | Field mustard | nucleus | 17.83 | 17.01 |
| Bra039926.1-P | Field mustard | nucleus | 8.17 | 16.9 |
| Bra000970.1-P | Field mustard | nucleus | 15.0 | 13.76 |
| Bra037343.1-P | Field mustard | cytosol | 13.5 | 11.39 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | EnsemblPlantsGene:Bra010178 | EnsemblPlants:Bra010178.1 | EnsemblPlants:Bra010178.1-P | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009269 | GO:GO:0009605 | GO:GO:0009607 | GO:GO:0009611 |
| GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009753 | GO:GO:0009963 | GO:GO:0009987 |
| GO:GO:0010200 | GO:GO:0016043 | GO:GO:0043565 | GO:GO:0043619 | GO:GO:0045893 | GO:GO:0046983 |
| GO:GO:0051090 | GO:GO:0051289 | GO:GO:2000068 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| UniProt:M4D129 | InterPro:MYC/MYB_N | PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 | PANTHER:PTHR11514 |
| PANTHER:PTHR11514:SF43 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI000253F7E4 | InterPro:bHLH_dom | SEG:seg |
Description
AT1G32640 (E=5e-263) ATMYC2, RD22BP1, JAI1, JIN1, MYC2, ZBF1 | MYC2; DNA binding / transcription activator/ transcription factor
Coordinates
chrA06:-:20507409..20509211
Molecular Weight (calculated)
65292.4 Da
IEP (calculated)
5.006
GRAVY (calculated)
-0.545
Length
600 amino acids
Sequence
(BLAST)
(BLAST)
001: MNLWTTDDNA SMMEAFMSSS SDISALWQPA TTTATASTTA PAPAGFNEET LQQRLQALIE GTNEGWTYAI FWQPSYDFSG ASVLGWGDGY YKGEEDKAKP
101: RQRTSPPPFS TPADQEYRKK VLRELNSLIS GGCGPTDDAV DEEVTDTEWF FLVSMTQSFA CGSGLAGKAF STGNAVWVYG SDQLTGSGCE RAKQGGVFGM
201: QTIACIPSAN GVVELGSTEQ IRQSSDLMNK VRVLFNFNGG AGDLSGLNWN LDPDQGENDP TMWINDPIGV AEQGNGAPSS SSQLFAKSIQ FENGGSSSTI
301: IENPNPDPAP SPVHSQTQNP KFSNNFSREL NFSTSSTTLV KPRPGEILSF GDEGKRSSVN PDPSSYSGQT QFENKRKKSI DDKVLTFGTG GGESDHSDLE
401: ASVVKEIPEK RPKKRGRKPA NGREEPLNHV EAERQRREKL NQRFYALRAV VPNVSKMDKA SLLGDAIAYI NELKSKVTKT ESEKTQIKTQ LEEVKMELAG
501: RKASAGGDLS SSCSMTAIKP VGMEIEVKII GWDAMIRVES SKRNHPAARL MSALMDLELE VNHASMSVVN DLMIQQATVK MGFRIYTQEQ LRASLISKIG
101: RQRTSPPPFS TPADQEYRKK VLRELNSLIS GGCGPTDDAV DEEVTDTEWF FLVSMTQSFA CGSGLAGKAF STGNAVWVYG SDQLTGSGCE RAKQGGVFGM
201: QTIACIPSAN GVVELGSTEQ IRQSSDLMNK VRVLFNFNGG AGDLSGLNWN LDPDQGENDP TMWINDPIGV AEQGNGAPSS SSQLFAKSIQ FENGGSSSTI
301: IENPNPDPAP SPVHSQTQNP KFSNNFSREL NFSTSSTTLV KPRPGEILSF GDEGKRSSVN PDPSSYSGQT QFENKRKKSI DDKVLTFGTG GGESDHSDLE
401: ASVVKEIPEK RPKKRGRKPA NGREEPLNHV EAERQRREKL NQRFYALRAV VPNVSKMDKA SLLGDAIAYI NELKSKVTKT ESEKTQIKTQ LEEVKMELAG
501: RKASAGGDLS SSCSMTAIKP VGMEIEVKII GWDAMIRVES SKRNHPAARL MSALMDLELE VNHASMSVVN DLMIQQATVK MGFRIYTQEQ LRASLISKIG
001: MTDYRLQPTM NLWTTDDNAS MMEAFMSSSD ISTLWPPAST TTTTATTETT PTPAMEIPAQ AGFNQETLQQ RLQALIEGTH EGWTYAIFWQ PSYDFSGASV
101: LGWGDGYYKG EEDKANPRRR SSSPPFSTPA DQEYRKKVLR ELNSLISGGV APSDDAVDEE VTDTEWFFLV SMTQSFACGA GLAGKAFATG NAVWVSGSDQ
201: LSGSGCERAK QGGVFGMHTI ACIPSANGVV EVGSTEPIRQ SSDLINKVRI LFNFDGGAGD LSGLNWNLDP DQGENDPSMW INDPIGTPGS NEPGNGAPSS
301: SSQLFSKSIQ FENGSSSTIT ENPNLDPTPS PVHSQTQNPK FNNTFSRELN FSTSSSTLVK PRSGEILNFG DEGKRSSGNP DPSSYSGQTQ FENKRKRSMV
401: LNEDKVLSFG DKTAGESDHS DLEASVVKEV AVEKRPKKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNVSK MDKASLLGDA IAYINELKSK
501: VVKTESEKLQ IKNQLEEVKL ELAGRKASAS GGDMSSSCSS IKPVGMEIEV KIIGWDAMIR VESSKRNHPA ARLMSALMDL ELEVNHASMS VVNDLMIQQA
601: TVKMGFRIYT QEQLRASLIS KIG
101: LGWGDGYYKG EEDKANPRRR SSSPPFSTPA DQEYRKKVLR ELNSLISGGV APSDDAVDEE VTDTEWFFLV SMTQSFACGA GLAGKAFATG NAVWVSGSDQ
201: LSGSGCERAK QGGVFGMHTI ACIPSANGVV EVGSTEPIRQ SSDLINKVRI LFNFDGGAGD LSGLNWNLDP DQGENDPSMW INDPIGTPGS NEPGNGAPSS
301: SSQLFSKSIQ FENGSSSTIT ENPNLDPTPS PVHSQTQNPK FNNTFSRELN FSTSSSTLVK PRSGEILNFG DEGKRSSGNP DPSSYSGQTQ FENKRKRSMV
401: LNEDKVLSFG DKTAGESDHS DLEASVVKEV AVEKRPKKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNVSK MDKASLLGDA IAYINELKSK
501: VVKTESEKLQ IKNQLEEVKL ELAGRKASAS GGDMSSSCSS IKPVGMEIEV KIIGWDAMIR VESSKRNHPA ARLMSALMDL ELEVNHASMS VVNDLMIQQA
601: TVKMGFRIYT QEQLRASLIS KIG
Arabidopsis Description
MYC2ZBF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W7C3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.