CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH02523
KRH11175
KRH12644
KRH19420
KRH21078
KRH37606
KRH39044
KRH42552
KRH58647

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G32640.1	KRH11175	AT1G30135.1	19309455
AT1G32640.1	KRH21078	AT1G30135.1	19309455
AT1G32640.1	KRH42552	AT1G30135.1	19309455
AT1G32640.1	KRH58647	AT1G30135.1	19309455
AT1G32640.1	KRH39044	AT1G48500.1	19309455
AT1G32640.1	KRH39044	AT3G17860.1	17637675
AT1G32640.1	KRH02523	AT3G43440.1	19309455
AT1G32640.1	KRH12644	AT3G43440.1	19309455
AT1G32640.1	KRH19420	AT3G43440.1	19309455
AT1G32640.1	KRH37606	AT3G43440.1	19309455

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH74418	Soybean	nucleus	78.25	89.1
KRH75613	Soybean	nucleus	59.1	67.82
KRH45440	Soybean	nucleus	58.14	64.98
VIT_02s0012g01320.t01	Wine grape	nucleus	58.28	64.25
Bra017527.1-P	Field mustard	nucleus	19.84	64.16
CDX77688	Canola	nucleus	38.03	61.5
CDY58502	Canola	nucleus	37.76	61.47
Solyc08g005050.2.1	Tomato	nucleus	38.85	61.21
PGSC0003DMT400002963	Potato	nucleus	49.66	60.7
CDX73261	Canola	nucleus	35.7	58.92
CDY03195	Canola	nucleus	43.78	58.72
KRH05127	Soybean	nucleus, plastid	23.53	58.7
CDY26910	Canola	nucleus	35.57	58.69
Bra013263.1-P	Field mustard	nucleus	21.75	58.67
Bra010178.1-P	Field mustard	nucleus	48.02	58.5
Solyc08g076930.1.1	Tomato	nucleus	54.31	57.62
PGSC0003DMT400045204	Potato	nucleus	54.58	57.49
AT4G17880.1	Thale cress	nucleus	45.69	56.71
AT1G32640.1	Thale cress	nucleus	48.29	56.66
CDY35179	Canola	nucleus	43.5	56.58
CDX84081	Canola	nucleus	40.9	56.52
AT5G46760.1	Thale cress	nucleus	44.32	54.73
Bra024998.1-P	Field mustard	nucleus	43.37	54.66
CDX78808	Canola	nucleus	42.68	53.89
CDY44507	Canola	nucleus	43.09	53.75
Bra013264.1-P	Field mustard	nucleus	20.38	50.17
HORVU1Hr1G050560.1	Barley	nucleus	46.79	50.0
TraesCS1B01G208000.1	Wheat	nucleus	46.92	49.49
CDY03185	Canola	nucleus	31.87	49.26
Os10t0575000-01	Rice	nucleus	47.06	49.21
TraesCS1D01G196900.1	Wheat	nucleus	46.79	49.21
Zm00001d030028_P001	Maize	nucleus	47.06	48.79
Zm00001d047017_P001	Maize	nucleus	46.79	48.65
KXG39194	Sorghum	nucleus	46.65	48.23
TraesCS1A01G193200.1	Wheat	nucleus	45.01	47.47
Bra017520.1-P	Field mustard	nucleus	32.28	47.39
CDY59973	Canola	nucleus	32.97	47.35
CDY35183	Canola	nucleus	32.83	47.34
Bra017523.1-P	Field mustard	nucleus	32.56	46.94
CDY03183	Canola	nucleus	32.56	46.76
Bra024993.1-P	Field mustard	nucleus	23.26	45.09
CDX77696	Canola	nucleus	7.39	45.0
AT5G46830.1	Thale cress	nucleus	31.05	44.42
Bra024992.1-P	Field mustard	nucleus	15.05	40.59
CDX77699	Canola	nucleus	15.05	40.59
CDY33482	Canola	nucleus	14.91	40.22
HORVU0Hr1G025420.1	Barley	cytosol, nucleus	8.34	37.2
KRH47834	Soybean	nucleus	22.98	36.21
KRH06400	Soybean	nucleus	22.98	36.05
Zm00001d031717_P001	Maize	nucleus	12.31	35.43
Zm00001d052728_P001	Maize	nucleus	13.0	34.55
KXG25462	Sorghum	nucleus	13.13	34.53
TraesCS1A01G369200.1	Wheat	nucleus	9.17	33.84
TraesCS7D01G102200.1	Wheat	nucleus	11.63	33.2
TraesCS5A01G306500.1	Wheat	nucleus	12.72	33.1
OQU75588	Sorghum	nucleus	11.9	33.08
OQU80776	Sorghum	nucleus	11.9	33.08
TraesCS5D01G313500.1	Wheat	nucleus	12.59	32.97
TraesCS5D01G313600.1	Wheat	nucleus	12.59	32.97
TraesCS2B01G469200.1	Wheat	nucleus	11.08	32.93
TraesCSU01G222600.1	Wheat	nucleus	11.08	32.93
HORVU5Hr1G080040.1	Barley	nucleus	12.04	32.84
TraesCS1D01G374800.1	Wheat	nucleus	11.9	32.83
TraesCS5A01G306400.1	Wheat	nucleus	9.99	32.74
TraesCS5A01G306200.1	Wheat	nucleus	12.45	32.62
TraesCS5B01G307000.1	Wheat	nucleus	12.45	32.62
OQU80778	Sorghum	nucleus	12.04	32.59
TraesCS2A01G448500.1	Wheat	nucleus	11.35	32.42
TraesCS2B01G469300.1	Wheat	nucleus	11.35	32.42
TraesCS5A01G306700.1	Wheat	peroxisome	12.04	32.12
EER99201	Sorghum	nucleus	13.0	32.09
OQU86344	Sorghum	nucleus	11.22	32.03
TraesCS5A01G306600.1	Wheat	nucleus	12.04	32.0
TraesCS5D01G313700.1	Wheat	nucleus	12.04	32.0
TraesCS5B01G306600.1	Wheat	nucleus	11.9	31.87
Os09t0519100-00	Rice	nucleus	11.49	31.82
EER97058	Sorghum	cytosol, nucleus, plastid	11.9	31.52
TraesCS5B01G307100.1	Wheat	nucleus	11.76	31.5
TraesCS5D01G313400.1	Wheat	nucleus	11.76	31.5
Zm00001d006150_P001	Maize	nucleus	12.45	31.27
OQU80775	Sorghum	cytosol, nucleus, peroxisome, plastid	11.9	31.18
TraesCS5B01G306800.1	Wheat	nucleus	11.9	31.07
TraesCS1B01G387900.1	Wheat	nucleus	10.12	30.96
HORVU5Hr1G080080.1	Barley	nucleus, plastid	8.76	30.48
KRH19522	Soybean	nucleus	20.79	30.04
Os08t0543700-00	Rice	nucleus, peroxisome, plastid	10.81	30.04
Zm00001d021164_P001	Maize	nucleus	11.9	30.0
KRH32144	Soybean	nucleus	20.66	29.96
OQU80777	Sorghum	nucleus	11.35	29.64
HORVU5Hr1G079900.1	Barley	cytosol	10.81	29.26
KRH68922	Soybean	nucleus	21.34	28.36
KRH06456	Soybean	nucleus	23.94	28.32
KRH47899	Soybean	nucleus	23.39	27.32
KRG97199	Soybean	nucleus	21.48	25.36
KRH42021	Soybean	nucleus	6.7	25.13
KRH28296	Soybean	nucleus	11.63	24.36
KRH77192	Soybean	nucleus	10.67	22.87
KRH67189	Soybean	cytosol, mitochondrion, nucleus, plastid	17.1	21.85
KRH58186	Soybean	nucleus	10.53	21.33
KRH47401	Soybean	nucleus	5.88	21.18
KRH23623	Soybean	nucleus	6.29	21.1
KRG95511	Soybean	cytosol, mitochondrion, nucleus, plastid	16.83	20.92
KRH04348	Soybean	nucleus	10.67	20.91
KRH28295	Soybean	nucleus	8.76	20.45
KRH09683	Soybean	nucleus	7.25	20.23
KRH71432	Soybean	nucleus	17.78	19.91
KRH32008	Soybean	extracellular, plastid	18.06	19.88
KRH10664	Soybean	nucleus	9.99	19.78
KRH21680	Soybean	nucleus, vacuole	10.12	19.68
KRH77195	Soybean	nucleus	9.85	19.57
KRH49880	Soybean	nucleus	8.76	19.45
KRH04346	Soybean	nucleus	9.85	19.41
KRH44509	Soybean	nucleus	5.61	19.25
KRH00980	Soybean	nucleus	5.34	19.21
KRH58187	Soybean	endoplasmic reticulum	8.76	19.05
KRH44510	Soybean	nucleus	7.11	18.91
KRH77193	Soybean	nucleus	8.48	18.9
KRH23624	Soybean	nucleus	7.25	18.66
KRH44511	Soybean	nucleus	8.34	18.6
KRH04347	Soybean	nucleus	8.62	18.48
KRH58189	Soybean	nucleus	9.58	18.32
KRH48858	Soybean	nucleus	8.07	18.32
KRH41187	Soybean	nucleus	15.73	18.25
KRH59908	Soybean	nucleus	15.46	17.91
KRH47400	Soybean	nucleus	6.57	17.84
KRH66425	Soybean	nucleus	7.52	17.63
KRH47399	Soybean	nucleus	8.21	17.6
KRH40248	Soybean	cytosol	3.42	17.36
KRH23621	Soybean	nucleus	6.7	16.84
KRH48860	Soybean	nucleus	7.25	16.77
KRH40246	Soybean	nucleus, vacuole	6.16	16.67
KRH48144	Soybean	nucleus	14.77	16.62
KRH09685	Soybean	cytosol	6.7	16.55
KRH65046	Soybean	nucleus	14.64	16.54
KRH00979	Soybean	nucleus	6.84	16.45
KRH47398	Soybean	nucleus	8.21	16.22
KRH44512	Soybean	nucleus	8.07	15.73
KRH00981	Soybean	nucleus	6.84	15.38
KRH66407	Soybean	nucleus	8.07	15.13
KRH48847	Soybean	nucleus	7.52	14.44

Protein Annotations

EntrezGene:100790168	MapMan:15.5.32	Gene3D:4.10.280.10	EMBL:ACUP02005942	ncoils:Coil	EnsemblPlantsGene:GLYMA_09G204500
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598
InterPro:IPR036638	UniProt:K7LF24	EnsemblPlants:KRH39540	ProteinID:KRH39540	ProteinID:KRH39540.1	InterPro:MYC/MYB_N
PFAM:PF00010	PFAM:PF14215	PFscan:PS50888	PANTHER:PTHR11514	PANTHER:PTHR11514:SF43	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI00023C89FE	InterPro:bHLH_dom	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:-:42861354..42864101

Molecular Weight (calculated)

80193.9 Da

IEP (calculated)

6.467

GRAVY (calculated)

-0.521

Length

731 amino acids

Sequence
(BLAST)

001: MVRIRTPCLR KSGRFAEGSH SLSLVLSLKL KFTLNALQIN PKLEYLLILS LPNLNPSECF LSVTNPNHQL SQRMNLWTDE NSSVMEAFMP SSDLSSIWPP
101: PAPPQPQSTA VFNQDTLQHR LQALIEGARE TWTYAIFWQS SYDYSGSTLL GWGDGYYKGD DDKAKAKAKS KATSAAEQDH RKKVLRELNS LISGSSSASA
201: SDDVDEEVTD TEWFFLVSMT QSFVNGGGLP GQAFFNSTPV WVTGSDRLSA SPCERARQGH MFGLQTLVCI PSANGVVELG STELIFQNSD LMNKVKVLFN
301: FSNNNFDMGS SWPATSADQG ENDPSSLWLS DPEVRDSVNT AAATPSVMVP AQTQGISISK TMQLESSIQT PGSSTLTETP SSIHAIPQNQ SVFSRELNFS
401: EYGFDPKSGN NQNHHSLKPE SGEILSFGES RRTSYGGVNG NTNTNTNSNS HFFSGQSPFV AAVDENKKNN MSNNGKKRSP NSRGSNDDGM LSFTSGVIIP
501: ATNLKSGGGG DSDHSDLEAS VVKDPVVEPE KRPRKRGRKP ANGREEPLNH VEAERQRREK LNQRFYALRA VVPNVSKMDK ASLLGDAISY ITELKSKLQT
601: LESDKDVLHK QLEGVKKELE KTTDNVSSNH ACNNNNNNKL SSNQPALIDL VEMDVKIIGW DAMITITCSK KNHPAATLMT ALMELDLDVH YATVTLVNDL
701: MIQQATVKMG SRFYTQEQLR AALSAKVGDV R

Best Arabidopsis Sequence Match ( AT1G32640.1 )
(BLAST)

001: MTDYRLQPTM NLWTTDDNAS MMEAFMSSSD ISTLWPPAST TTTTATTETT PTPAMEIPAQ AGFNQETLQQ RLQALIEGTH EGWTYAIFWQ PSYDFSGASV
101: LGWGDGYYKG EEDKANPRRR SSSPPFSTPA DQEYRKKVLR ELNSLISGGV APSDDAVDEE VTDTEWFFLV SMTQSFACGA GLAGKAFATG NAVWVSGSDQ
201: LSGSGCERAK QGGVFGMHTI ACIPSANGVV EVGSTEPIRQ SSDLINKVRI LFNFDGGAGD LSGLNWNLDP DQGENDPSMW INDPIGTPGS NEPGNGAPSS
301: SSQLFSKSIQ FENGSSSTIT ENPNLDPTPS PVHSQTQNPK FNNTFSRELN FSTSSSTLVK PRSGEILNFG DEGKRSSGNP DPSSYSGQTQ FENKRKRSMV
401: LNEDKVLSFG DKTAGESDHS DLEASVVKEV AVEKRPKKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNVSK MDKASLLGDA IAYINELKSK
501: VVKTESEKLQ IKNQLEEVKL ELAGRKASAS GGDMSSSCSS IKPVGMEIEV KIIGWDAMIR VESSKRNHPA ARLMSALMDL ELEVNHASMS VVNDLMIQQA
601: TVKMGFRIYT QEQLRASLIS KIG

Arabidopsis Description

MYC2ZBF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W7C3]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.