Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 3
- extracellular 2
- mitochondrion 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH71432 | Soybean | nucleus | 90.06 | 91.58 |
| VIT_07s0104g00090.t01 | Wine grape | nucleus | 69.43 | 66.24 |
| KRG95511 | Soybean | cytosol, mitochondrion, nucleus, plastid | 53.77 | 60.71 |
| KRH67189 | Soybean | cytosol, mitochondrion, nucleus, plastid | 52.26 | 60.66 |
| GSMUA_Achr3P17620_001 | Banana | nucleus | 50.0 | 58.87 |
| AT4G09820.1 | Thale cress | nucleus | 43.83 | 56.18 |
| PGSC0003DMT400033569 | Potato | nucleus | 48.8 | 54.92 |
| Solyc09g065100.1.1 | Tomato | nucleus | 56.02 | 54.71 |
| CDX86891 | Canola | nucleus | 42.47 | 54.13 |
| CDX99505 | Canola | nucleus | 42.02 | 53.55 |
| Bra037887.1-P | Field mustard | nucleus | 39.76 | 53.12 |
| GSMUA_Achr6P21490_001 | Banana | nucleus | 50.6 | 51.61 |
| TraesCS1A01G102400.2 | Wheat | nucleus, vacuole | 41.11 | 43.61 |
| TraesCS1B01G112900.1 | Wheat | nucleus | 39.01 | 41.05 |
| TraesCS1B01G113100.4 | Wheat | nucleus | 40.81 | 39.39 |
| OQU88697 | Sorghum | nucleus | 39.91 | 39.14 |
| Zm00001d019170_P001 | Maize | nucleus | 39.61 | 39.02 |
| HORVU1Hr1G020370.2 | Barley | extracellular, nucleus | 28.46 | 37.13 |
| TraesCS1D01G094200.1 | Wheat | nucleus | 33.89 | 35.66 |
| KRH41187 | Soybean | nucleus | 29.97 | 31.59 |
| KRH59908 | Soybean | nucleus | 29.52 | 31.06 |
| KRH48144 | Soybean | nucleus | 28.01 | 28.62 |
| KRH65046 | Soybean | nucleus | 26.96 | 27.67 |
| KRH42021 | Soybean | nucleus | 7.83 | 26.67 |
| PGSC0003DMT400028054 | Potato | cytosol | 7.68 | 25.89 |
| PGSC0003DMT400028052 | Potato | nucleus | 7.68 | 25.12 |
| KRH47834 | Soybean | nucleus | 17.17 | 24.57 |
| KRH06400 | Soybean | nucleus | 17.17 | 24.46 |
| KRH05127 | Soybean | nucleus, plastid | 10.09 | 22.87 |
| KRH28295 | Soybean | nucleus | 10.54 | 22.36 |
| KRH47401 | Soybean | nucleus | 6.78 | 22.17 |
| KRH32144 | Soybean | nucleus | 16.57 | 21.83 |
| KRH68922 | Soybean | nucleus | 17.77 | 21.45 |
| KRH00980 | Soybean | nucleus | 6.48 | 21.18 |
| KRH19522 | Soybean | nucleus | 16.11 | 21.15 |
| KRH23623 | Soybean | nucleus | 6.93 | 21.1 |
| KRH28296 | Soybean | nucleus | 10.99 | 20.92 |
| KRH77195 | Soybean | nucleus | 11.45 | 20.65 |
| KRH74418 | Soybean | nucleus | 19.73 | 20.41 |
| KRH06456 | Soybean | nucleus | 18.52 | 19.9 |
| KRH09683 | Soybean | nucleus | 7.83 | 19.85 |
| KRH49880 | Soybean | nucleus | 9.64 | 19.45 |
| KRG97199 | Soybean | nucleus | 18.07 | 19.39 |
| KRH77192 | Soybean | nucleus | 9.94 | 19.35 |
| KRH44509 | Soybean | nucleus | 6.17 | 19.25 |
| KRH47899 | Soybean | nucleus | 17.92 | 19.01 |
| KRH75613 | Soybean | nucleus | 18.22 | 19.0 |
| KRH45440 | Soybean | nucleus | 18.52 | 18.81 |
| KRH04348 | Soybean | nucleus | 10.54 | 18.77 |
| KRH23624 | Soybean | nucleus | 7.98 | 18.66 |
| KRH04346 | Soybean | nucleus | 10.39 | 18.6 |
| KRH44511 | Soybean | nucleus | 9.19 | 18.6 |
| KRH40246 | Soybean | nucleus, vacuole | 7.53 | 18.52 |
| KRH47399 | Soybean | nucleus | 9.49 | 18.48 |
| KRH39540 | Soybean | nucleus | 19.88 | 18.06 |
| KRH66425 | Soybean | nucleus | 8.43 | 17.95 |
| KRH09685 | Soybean | cytosol | 7.98 | 17.91 |
| KRH23621 | Soybean | nucleus | 7.83 | 17.87 |
| KRH47400 | Soybean | nucleus | 7.08 | 17.47 |
| KRH58186 | Soybean | nucleus | 9.49 | 17.45 |
| KRH58189 | Soybean | nucleus | 9.94 | 17.28 |
| KRH48860 | Soybean | nucleus | 8.13 | 17.09 |
| KRH40248 | Soybean | cytosol | 3.61 | 16.67 |
| KRH04347 | Soybean | nucleus | 8.43 | 16.42 |
| KRH58187 | Soybean | endoplasmic reticulum | 8.28 | 16.37 |
| KRH44510 | Soybean | nucleus | 6.78 | 16.36 |
| KRH00981 | Soybean | nucleus | 7.98 | 16.31 |
| KRH10664 | Soybean | nucleus | 8.89 | 15.99 |
| KRH21680 | Soybean | nucleus, vacuole | 8.89 | 15.69 |
| KRH77193 | Soybean | nucleus | 7.68 | 15.55 |
| KRH48858 | Soybean | nucleus | 7.53 | 15.53 |
| KRH44512 | Soybean | nucleus | 8.58 | 15.2 |
| KRH66407 | Soybean | nucleus | 8.73 | 14.87 |
| KRH48847 | Soybean | nucleus | 8.43 | 14.7 |
| KRH47398 | Soybean | nucleus | 8.13 | 14.59 |
| KRH00979 | Soybean | nucleus | 6.33 | 13.82 |
Protein Annotations
| EntrezGene:100807157 | MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02006093 | ncoils:Coil | EnsemblPlantsGene:GLYMA_10G026000 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | UniProt:K7LH16 | EnsemblPlants:KRH32008 | ProteinID:KRH32008 | ProteinID:KRH32008.1 | InterPro:MYC/MYB_N |
| PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF93 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000294C075 | InterPro:bHLH_dom | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:+:2262144..2271914
Molecular Weight (calculated)
73584.9 Da
IEP (calculated)
5.138
GRAVY (calculated)
-0.421
Length
664 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAPLGTSLQ SMLQAAVQSV QWTYSLFWQL CPQQGILVWG DGYYNGAIKT RKTVQPMEVS AEEASLQRSQ QLRELYESLS AGETNPPCRR PCAALSPEDL
101: TESEWFYLMC VSFSFPPGVG LPGKAYARRQ HLWLTGANEV DSKTFSRAIL AKSARIQTVV CIPLLDGVVE FGTMDKVQED LSFIQHVETF FIDHLNPLPP
201: KPALSEHSTS NPASSSEHIP AVMYTVVDPL AANPNLNDDM DEDIEEEEEE EEEDEEPESG SEDKAGYGIA RQTPTPAMAA EPSELIQLEM PEDIRLGSPN
301: DGSNNLDSDF HLLAVSQGVN TAGQAESTRR WGLSQNPMQV QLPTSALHPL EDLTQEDTHY SQTVSNILQN QFTRWPASPS SVGYVSYSTQ SAFAKWSSRA
401: SHHHFHPAAA AAADGTSQCI LKYILFTVPY LHAKNPGESS PQTTAADTKL RGKGAPQEEL SANHVLAERR RREKLNERFI ILRSLVPFVT KMDKASILGD
501: TIEYVKQLRR KIQELEARNR QMTEAEQRSK LPEIAVQRTS SSSSKEQQRS GVTMTEKRKV RIVEGVVAKA KAVEAEATTS VQVSIIESDA LLEIECRHKE
601: GLLLDVMQML REVRIEVIGV QSSLNNGVFV AELRAKVKEH ANGKKVSIVE VKRALNQIIP HAVD
101: TESEWFYLMC VSFSFPPGVG LPGKAYARRQ HLWLTGANEV DSKTFSRAIL AKSARIQTVV CIPLLDGVVE FGTMDKVQED LSFIQHVETF FIDHLNPLPP
201: KPALSEHSTS NPASSSEHIP AVMYTVVDPL AANPNLNDDM DEDIEEEEEE EEEDEEPESG SEDKAGYGIA RQTPTPAMAA EPSELIQLEM PEDIRLGSPN
301: DGSNNLDSDF HLLAVSQGVN TAGQAESTRR WGLSQNPMQV QLPTSALHPL EDLTQEDTHY SQTVSNILQN QFTRWPASPS SVGYVSYSTQ SAFAKWSSRA
401: SHHHFHPAAA AAADGTSQCI LKYILFTVPY LHAKNPGESS PQTTAADTKL RGKGAPQEEL SANHVLAERR RREKLNERFI ILRSLVPFVT KMDKASILGD
501: TIEYVKQLRR KIQELEARNR QMTEAEQRSK LPEIAVQRTS SSSSKEQQRS GVTMTEKRKV RIVEGVVAKA KAVEAEATTS VQVSIIESDA LLEIECRHKE
601: GLLLDVMQML REVRIEVIGV QSSLNNGVFV AELRAKVKEH ANGKKVSIVE VKRALNQIIP HAVD
001: MDESSIIPAE KVAGAEKKEL QGLLKTAVQS VDWTYSVFWQ FCPQQRVLVW GNGYYNGAIK TRKTTQPAEV TAEEAALERS QQLRELYETL LAGESTSEAR
101: ACTALSPEDL TETEWFYLMC VSFSFPPPSG MPGKAYARRK HVWLSGANEV DSKTFSRAIL AKSAKIQTVV CIPMLDGVVE LGTTKKVRED VEFVELTKSF
201: FYDHCKTNPK PALSEHSTYE VHEEAEDEEE VEEEMTMSEE MRLGSPDDED VSNQNLHSDL HIESTHTLDT HMDMMNLMEE GGNYSQTVTT LLMSHPTSLL
301: SDSVSTSSYI QSSFATWRVE NGKEHQQVKT APSSQWVLKQ MIFRVPFLHD NTKDKRLPRE DLSHVVAERR RREKLNEKFI TLRSMVPFVT KMDKVSILGD
401: TIAYVNHLRK RVHELENTHH EQQHKRTRTC KRKTSEEVEV SIIENDVLLE MRCEYRDGLL LDILQVLHEL GIETTAVHTS VNDHDFEAEI RAKVRGKKAS
501: IAEVKRAIHQ VIIHDTNL
101: ACTALSPEDL TETEWFYLMC VSFSFPPPSG MPGKAYARRK HVWLSGANEV DSKTFSRAIL AKSAKIQTVV CIPMLDGVVE LGTTKKVRED VEFVELTKSF
201: FYDHCKTNPK PALSEHSTYE VHEEAEDEEE VEEEMTMSEE MRLGSPDDED VSNQNLHSDL HIESTHTLDT HMDMMNLMEE GGNYSQTVTT LLMSHPTSLL
301: SDSVSTSSYI QSSFATWRVE NGKEHQQVKT APSSQWVLKQ MIFRVPFLHD NTKDKRLPRE DLSHVVAERR RREKLNEKFI TLRSMVPFVT KMDKVSILGD
401: TIAYVNHLRK RVHELENTHH EQQHKRTRTC KRKTSEEVEV SIIENDVLLE MRCEYRDGLL LDILQVLHEL GIETTAVHTS VNDHDFEAEI RAKVRGKKAS
501: IAEVKRAIHQ VIIHDTNL
Arabidopsis Description
TT8Transcription factor TT8 [Source:UniProtKB/Swiss-Prot;Acc:Q9FT81]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.