Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G22760.1 | KRH39574 | AT1G32230.1 | 19548978 |
| AT2G22760.1 | KRH74370 | AT1G32230.1 | 19548978 |
| AT2G22760.1 | KRH74373 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH04346 | Soybean | nucleus | 89.79 | 92.45 |
| KRH28295 | Soybean | nucleus | 45.29 | 55.27 |
| KRH77195 | Soybean | nucleus | 50.26 | 52.17 |
| VIT_07s0205g00170.t01 | Wine grape | cytosol | 15.71 | 47.62 |
| KRH40248 | Soybean | cytosol | 16.75 | 44.44 |
| KRH77193 | Soybean | nucleus | 37.43 | 43.6 |
| KRH09683 | Soybean | nucleus | 28.01 | 40.84 |
| KRH04347 | Soybean | nucleus | 35.86 | 40.18 |
| KRH58187 | Soybean | endoplasmic reticulum | 34.29 | 38.99 |
| KRH44509 | Soybean | nucleus | 21.73 | 38.97 |
| KRH23621 | Soybean | nucleus | 29.32 | 38.49 |
| KRH47401 | Soybean | nucleus | 20.42 | 38.42 |
| KRH23623 | Soybean | nucleus | 21.47 | 37.61 |
| KRH28296 | Soybean | nucleus | 34.29 | 37.54 |
| KRH23624 | Soybean | nucleus | 27.75 | 37.32 |
| KRH44511 | Soybean | nucleus | 31.68 | 36.89 |
| KRH09685 | Soybean | cytosol | 28.27 | 36.49 |
| KRH42021 | Soybean | nucleus | 18.59 | 36.41 |
| KRH10664 | Soybean | nucleus | 35.08 | 36.31 |
| KRH49880 | Soybean | nucleus | 31.15 | 36.17 |
| KRH47399 | Soybean | nucleus | 32.2 | 36.07 |
| KRH21680 | Soybean | nucleus, vacuole | 35.08 | 35.64 |
| KRH44510 | Soybean | nucleus | 25.39 | 35.27 |
| KRH77192 | Soybean | nucleus | 31.41 | 35.19 |
| KRH00979 | Soybean | nucleus | 27.75 | 34.87 |
| KRH04348 | Soybean | nucleus | 33.77 | 34.58 |
| KRH48860 | Soybean | nucleus | 28.53 | 34.49 |
| KRH58186 | Soybean | nucleus | 32.46 | 34.35 |
| KRH47400 | Soybean | nucleus | 24.08 | 34.2 |
| KRH66425 | Soybean | nucleus | 27.23 | 33.33 |
| CDY13735 | Canola | nucleus | 24.87 | 32.87 |
| Bra039926.1-P | Field mustard | nucleus | 24.87 | 32.76 |
| KRH00980 | Soybean | nucleus | 17.28 | 32.51 |
| CDY52593 | Canola | nucleus | 24.08 | 32.28 |
| CDX89512 | Canola | nucleus | 24.87 | 32.09 |
| AT2G22770.1 | Thale cress | nucleus | 26.18 | 31.25 |
| CDY52591 | Canola | nucleus | 25.65 | 31.11 |
| KRH00981 | Soybean | nucleus | 26.44 | 31.08 |
| Bra039927.1-P | Field mustard | nucleus | 25.65 | 31.01 |
| AT2G22760.1 | Thale cress | nucleus | 23.82 | 30.85 |
| CDX89513 | Canola | nucleus | 26.18 | 30.77 |
| CDY25630 | Canola | nucleus | 25.92 | 30.46 |
| Bra030207.1-P | Field mustard | nucleus | 25.65 | 30.06 |
| CDY25629 | Canola | nucleus | 23.56 | 30.0 |
| KRH47398 | Soybean | nucleus | 29.06 | 30.0 |
| Bra030208.1-P | Field mustard | nucleus | 23.82 | 29.93 |
| KRH48858 | Soybean | nucleus | 25.13 | 29.81 |
| KRH44512 | Soybean | nucleus | 29.06 | 29.6 |
| KRH66407 | Soybean | nucleus | 29.32 | 28.72 |
| KRH48847 | Soybean | nucleus | 28.27 | 28.35 |
| KRH40246 | Soybean | nucleus, vacuole | 19.63 | 27.78 |
| KRH06400 | Soybean | nucleus | 15.71 | 12.88 |
| KRH47834 | Soybean | nucleus | 15.45 | 12.72 |
| KRH19522 | Soybean | nucleus | 16.23 | 12.25 |
| KRH75613 | Soybean | nucleus | 19.9 | 11.93 |
| KRH32144 | Soybean | nucleus | 15.71 | 11.9 |
| KRH45440 | Soybean | nucleus | 20.16 | 11.77 |
| KRH68922 | Soybean | nucleus | 16.75 | 11.64 |
| KRH74418 | Soybean | nucleus | 19.37 | 11.53 |
| KRH67189 | Soybean | cytosol, mitochondrion, nucleus, plastid | 16.75 | 11.19 |
| KRG95511 | Soybean | cytosol, mitochondrion, nucleus, plastid | 16.75 | 10.88 |
| KRH06456 | Soybean | nucleus | 17.28 | 10.68 |
| KRH47899 | Soybean | nucleus | 17.28 | 10.54 |
| KRG97199 | Soybean | nucleus | 17.02 | 10.5 |
| KRH32008 | Soybean | extracellular, plastid | 17.28 | 9.94 |
| KRH71432 | Soybean | nucleus | 16.75 | 9.8 |
| KRH39540 | Soybean | nucleus | 18.32 | 9.58 |
| KRH41187 | Soybean | nucleus | 15.71 | 9.52 |
| KRH05127 | Soybean | nucleus, plastid | 7.07 | 9.22 |
| KRH59908 | Soybean | nucleus | 15.18 | 9.19 |
| KRH65046 | Soybean | nucleus | 14.14 | 8.35 |
| KRH48144 | Soybean | nucleus | 14.14 | 8.31 |
Protein Annotations
| EntrezGene:100788128 | MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | EMBL:ACUP02003226 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_05G110900 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| UniProt:I1K2I7 | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH58189 | ProteinID:KRH58189 | ProteinID:KRH58189.1 |
| EMBL:KT031106 | PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF100 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI00023C4D99 | InterPro:bHLH_dom | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr5:-:29512460..29514964
Molecular Weight (calculated)
42123.6 Da
IEP (calculated)
5.169
GRAVY (calculated)
-0.469
Length
382 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEELNKPMD GSATSWLSDL EMDDYNLFPD ECPLNLNLFD DQEFLSQDIA SALQEQTQTL QQSLSSECPS KTVSNSSTDE TTFDFERPAK LLKTTTSSSC
101: CNSDSSTITK SLSPKLSPSS SFSSFQSQIL SFDNPNPTSS SNTTTQFYGF DCTLNPTQNE MVSVSVPNMR KPRFPTQTAK GSPKNQNFET KTSHGKRSPA
201: HAQDHIMAER KRREKLSQSF IALAALVPGL KKMDKASVLG DAIKYVKELK ERLTVLEEQS KKSRAESVVV LNKPDLSGDD DSSSCDESIG ADSVSDSLFE
301: VESRVSGKEM LLRIHCQKQK GLLVKLLAEI QSHHLFVANS SVLPFGDSIL DITIVAQMGE SYNLTTKELV KNLRVAALKI LS
101: CNSDSSTITK SLSPKLSPSS SFSSFQSQIL SFDNPNPTSS SNTTTQFYGF DCTLNPTQNE MVSVSVPNMR KPRFPTQTAK GSPKNQNFET KTSHGKRSPA
201: HAQDHIMAER KRREKLSQSF IALAALVPGL KKMDKASVLG DAIKYVKELK ERLTVLEEQS KKSRAESVVV LNKPDLSGDD DSSSCDESIG ADSVSDSLFE
301: VESRVSGKEM LLRIHCQKQK GLLVKLLAEI QSHHLFVANS SVLPFGDSIL DITIVAQMGE SYNLTTKELV KNLRVAALKI LS
001: MATAMNVFST KWSSELDIEE YSIIHQFHMN SLVGDVPQSL SSLDDTTTCY NLDASCNKSL VEERPSKILK TTHISPNLHP FSSSNPPPPK HQPSSRILSF
101: EKTGLHVMNH NSPNLIFSPK DEEIGLPEHK KAELIIRGTK RAQSLTRSQS NAQDHILAER KRREKLTQRF VALSALIPGL KKMDKASVLG DAIKHIKYLQ
201: ESVKEYEEQK KEKTMESVVL VKKSSLVLDE NHQPSSSSSS DGNRNSSSSN LPEIEVRVSG KDVLIKILCE KQKGNVIKIM GEIEKLGLSI TNSNVLPFGP
301: TFDISIIAQK NNNFDMKIED VVKNLSFGLS KLT
101: EKTGLHVMNH NSPNLIFSPK DEEIGLPEHK KAELIIRGTK RAQSLTRSQS NAQDHILAER KRREKLTQRF VALSALIPGL KKMDKASVLG DAIKHIKYLQ
201: ESVKEYEEQK KEKTMESVVL VKKSSLVLDE NHQPSSSSSS DGNRNSSSSN LPEIEVRVSG KDVLIKILCE KQKGNVIKIM GEIEKLGLSI TNSNVLPFGP
301: TFDISIIAQK NNNFDMKIED VVKNLSFGLS KLT
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT2G22750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.