Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47401 | Soybean | nucleus | 85.92 | 90.15 |
| KRH40248 | Soybean | cytosol | 30.52 | 45.14 |
| KRH09683 | Soybean | nucleus | 44.6 | 36.26 |
| KRH23624 | Soybean | nucleus | 47.89 | 35.92 |
| KRH23623 | Soybean | nucleus | 35.68 | 34.86 |
| KRH47400 | Soybean | nucleus | 43.66 | 34.57 |
| KRH44510 | Soybean | nucleus | 44.6 | 34.55 |
| KRH23621 | Soybean | nucleus | 46.01 | 33.68 |
| KRH09685 | Soybean | cytosol | 45.54 | 32.77 |
| KRH44511 | Soybean | nucleus | 47.42 | 30.79 |
| KRH47399 | Soybean | nucleus | 47.89 | 29.91 |
| KRH48847 | Soybean | nucleus | 49.3 | 27.56 |
| KRH00979 | Soybean | nucleus | 38.5 | 26.97 |
| KRH00981 | Soybean | nucleus | 40.38 | 26.46 |
| KRH66407 | Soybean | nucleus | 47.89 | 26.15 |
| KRH00980 | Soybean | nucleus | 24.88 | 26.11 |
| KRH40246 | Soybean | nucleus, vacuole | 31.92 | 25.19 |
| KRH28295 | Soybean | nucleus | 36.62 | 24.92 |
| KRH47398 | Soybean | nucleus | 43.19 | 24.86 |
| KRH77193 | Soybean | nucleus | 37.56 | 24.39 |
| KRH44512 | Soybean | nucleus | 42.72 | 24.27 |
| KRH48860 | Soybean | nucleus | 35.68 | 24.05 |
| KRH66425 | Soybean | nucleus | 35.21 | 24.04 |
| KRH77195 | Soybean | nucleus | 40.85 | 23.64 |
| KRH48858 | Soybean | nucleus | 33.8 | 22.36 |
| KRH58187 | Soybean | endoplasmic reticulum | 35.21 | 22.32 |
| KRH04347 | Soybean | nucleus | 35.21 | 21.99 |
| KRH04346 | Soybean | nucleus | 38.03 | 21.83 |
| KRH58189 | Soybean | nucleus | 38.97 | 21.73 |
| KRH49880 | Soybean | nucleus | 33.33 | 21.58 |
| KRH10664 | Soybean | nucleus | 36.62 | 21.14 |
| KRH77192 | Soybean | nucleus | 33.8 | 21.11 |
| KRH21680 | Soybean | nucleus, vacuole | 36.62 | 20.74 |
| KRH58186 | Soybean | nucleus | 34.74 | 20.5 |
| KRH04348 | Soybean | nucleus | 35.68 | 20.38 |
| KRH28296 | Soybean | nucleus | 32.86 | 20.06 |
| KRH42021 | Soybean | nucleus | 12.68 | 13.85 |
| KRH06400 | Soybean | nucleus | 19.25 | 8.8 |
| KRH47834 | Soybean | nucleus | 17.84 | 8.19 |
| KRH41187 | Soybean | nucleus | 21.13 | 7.14 |
| KRH75613 | Soybean | nucleus | 21.13 | 7.06 |
| KRH74418 | Soybean | nucleus | 21.13 | 7.01 |
| KRH19522 | Soybean | nucleus | 16.43 | 6.92 |
| KRH59908 | Soybean | nucleus | 19.72 | 6.66 |
| KRH65046 | Soybean | nucleus | 20.19 | 6.65 |
| KRH45440 | Soybean | nucleus | 20.19 | 6.57 |
| KRH32144 | Soybean | nucleus | 15.49 | 6.55 |
| KRH48144 | Soybean | nucleus | 19.72 | 6.46 |
| KRH67189 | Soybean | cytosol, mitochondrion, nucleus, plastid | 16.9 | 6.29 |
| KRH71432 | Soybean | nucleus | 19.25 | 6.28 |
| KRH68922 | Soybean | nucleus | 15.96 | 6.18 |
| KRH32008 | Soybean | extracellular, plastid | 19.25 | 6.17 |
| KRH47899 | Soybean | nucleus | 17.84 | 6.07 |
| KRH06456 | Soybean | nucleus | 17.37 | 5.99 |
| KRG95511 | Soybean | cytosol, mitochondrion, nucleus, plastid | 16.43 | 5.95 |
| KRG97199 | Soybean | nucleus | 16.9 | 5.82 |
| KRH39540 | Soybean | nucleus | 19.25 | 5.61 |
| KRH05127 | Soybean | nucleus, plastid | 5.63 | 4.1 |
Protein Annotations
| EntrezGene:100527052 | MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02004932 | EMBL:BT091863 | UniProt:C6T354 |
| ncoils:Coil | EnsemblPlantsGene:GLYMA_08G215300 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 |
| InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH44509 | ProteinID:KRH44509 | ProteinID:KRH44509.1 |
| PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF48 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI0001B15326 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr8:+:17445685..17451524
Molecular Weight (calculated)
23720.0 Da
IEP (calculated)
4.546
GRAVY (calculated)
-0.418
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MEESGENWPS DSYLDDFVND DLGFDDEEFG SEDDSFSGMG ETDRKKRQRE LTERFLALSA TIPGFKKTDK TSILANASSY VKQLQQRVRE LEQLQEVQSN
101: VTSNEGATSS CEVNSSSNDY YCGGGGPNEI LPEVKVRVLQ KEVLIIIHCE KHKGIMLKIL SQLENVNLSI VNSSVLRFGK STLDITIVAQ MGEGYKMTVG
201: ELVKTLRVAI LTH
101: VTSNEGATSS CEVNSSSNDY YCGGGGPNEI LPEVKVRVLQ KEVLIIIHCE KHKGIMLKIL SQLENVNLSI VNSSVLRFGK STLDITIVAQ MGEGYKMTVG
201: ELVKTLRVAI LTH
001: MDEDFFLPDF SLVDIDFDFN IYEENNLSPD ESLSNSRRAD QSSKFDHQMH FECLREKPKA AVKPMMKINN KQQLISFDFS SNVISSPAAE EIIMDKLVGR
101: GTKRKTCSHG TRSPVLAKEH VLAERKRREK LSEKFIALSA LLPGLKKADK VTILDDAISR MKQLQEQLRT LKEEKEATRQ MESMILVKKS KVFFDEEPNL
201: SCSPSVHIEF DQALPEIEAK ISQNDILIRI LCEKSKGCMI NILNTIENFQ LRIENSIVLP FGDSTLDITV LAQMDKDFSM SILKDLVRNL RLAMV
101: GTKRKTCSHG TRSPVLAKEH VLAERKRREK LSEKFIALSA LLPGLKKADK VTILDDAISR MKQLQEQLRT LKEEKEATRQ MESMILVKKS KVFFDEEPNL
201: SCSPSVHIEF DQALPEIEAK ISQNDILIRI LCEKSKGCMI NILNTIENFQ LRIENSIVLP FGDSTLDITV LAQMDKDFSM SILKDLVRNL RLAMV
Arabidopsis Description
BHLH19Uncharacterized protein At2g22760 (Fragment) [Source:UniProtKB/TrEMBL;Acc:C0SV56]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.