Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G22760.1 | KRH39574 | AT1G32230.1 | 19548978 |
| AT2G22760.1 | KRH74370 | AT1G32230.1 | 19548978 |
| AT2G22760.1 | KRH74373 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58186 | Soybean | nucleus | 86.33 | 89.2 |
| KRH28296 | Soybean | nucleus | 54.42 | 58.17 |
| KRH77192 | Soybean | nucleus | 51.74 | 56.6 |
| VIT_07s0205g00170.t01 | Wine grape | cytosol | 17.96 | 53.17 |
| KRH40248 | Soybean | cytosol | 16.62 | 43.06 |
| KRH42021 | Soybean | nucleus | 20.11 | 38.46 |
| KRH09683 | Soybean | nucleus | 26.81 | 38.17 |
| KRH23623 | Soybean | nucleus | 22.25 | 38.07 |
| KRH10664 | Soybean | nucleus | 37.53 | 37.94 |
| KRH28295 | Soybean | nucleus | 31.64 | 37.7 |
| KRH23624 | Soybean | nucleus | 28.69 | 37.68 |
| KRH21680 | Soybean | nucleus, vacuole | 37.8 | 37.5 |
| KRH77193 | Soybean | nucleus | 32.71 | 37.2 |
| KRH47401 | Soybean | nucleus | 20.11 | 36.95 |
| KRH49880 | Soybean | nucleus | 32.17 | 36.47 |
| KRH04347 | Soybean | nucleus | 32.71 | 35.78 |
| KRH44509 | Soybean | nucleus | 20.38 | 35.68 |
| KRH58187 | Soybean | endoplasmic reticulum | 31.9 | 35.42 |
| CDX89512 | Canola | nucleus | 27.88 | 35.14 |
| KRH77195 | Soybean | nucleus | 34.32 | 34.78 |
| KRH23621 | Soybean | nucleus | 26.54 | 34.02 |
| KRH04346 | Soybean | nucleus | 33.78 | 33.96 |
| KRH58189 | Soybean | nucleus | 34.58 | 33.77 |
| KRH44510 | Soybean | nucleus | 24.66 | 33.45 |
| CDY25629 | Canola | nucleus | 26.81 | 33.33 |
| Bra030208.1-P | Field mustard | nucleus | 27.08 | 33.22 |
| CDY13735 | Canola | nucleus | 25.74 | 33.22 |
| Bra039926.1-P | Field mustard | nucleus | 25.74 | 33.1 |
| KRH47400 | Soybean | nucleus | 23.86 | 33.09 |
| CDY52593 | Canola | nucleus | 25.2 | 32.98 |
| KRH47399 | Soybean | nucleus | 30.03 | 32.84 |
| KRH09685 | Soybean | cytosol | 26.01 | 32.77 |
| KRH66425 | Soybean | nucleus | 27.35 | 32.69 |
| Bra039927.1-P | Field mustard | nucleus | 27.61 | 32.59 |
| AT2G22770.1 | Thale cress | nucleus | 27.88 | 32.5 |
| CDY52591 | Canola | nucleus | 27.35 | 32.38 |
| AT2G22760.1 | Thale cress | nucleus | 25.47 | 32.2 |
| CDY25630 | Canola | nucleus | 27.88 | 32.0 |
| KRH44511 | Soybean | nucleus | 27.88 | 31.71 |
| KRH48860 | Soybean | nucleus | 26.81 | 31.65 |
| Bra030207.1-P | Field mustard | nucleus | 27.61 | 31.6 |
| CDX89513 | Canola | nucleus | 27.35 | 31.38 |
| KRH00979 | Soybean | nucleus | 25.2 | 30.92 |
| KRH00980 | Soybean | nucleus | 16.62 | 30.54 |
| KRH48858 | Soybean | nucleus | 25.74 | 29.81 |
| KRH47398 | Soybean | nucleus | 28.15 | 28.38 |
| KRH44512 | Soybean | nucleus | 28.15 | 28.0 |
| KRH66407 | Soybean | nucleus | 28.42 | 27.18 |
| KRH48847 | Soybean | nucleus | 27.61 | 27.03 |
| KRH40246 | Soybean | nucleus, vacuole | 19.03 | 26.3 |
| KRH00981 | Soybean | nucleus | 21.98 | 25.23 |
| KRH06400 | Soybean | nucleus | 17.96 | 14.38 |
| KRH47834 | Soybean | nucleus | 17.43 | 14.01 |
| KRH19522 | Soybean | nucleus | 17.96 | 13.24 |
| KRH32144 | Soybean | nucleus | 17.69 | 13.1 |
| KRH75613 | Soybean | nucleus | 21.72 | 12.72 |
| KRH45440 | Soybean | nucleus | 21.98 | 12.54 |
| KRH74418 | Soybean | nucleus | 21.45 | 12.46 |
| KRH68922 | Soybean | nucleus | 17.69 | 12.0 |
| KRH67189 | Soybean | cytosol, mitochondrion, nucleus, plastid | 17.69 | 11.54 |
| KRG95511 | Soybean | cytosol, mitochondrion, nucleus, plastid | 17.69 | 11.22 |
| KRH06456 | Soybean | nucleus | 18.5 | 11.16 |
| KRG97199 | Soybean | nucleus | 18.23 | 10.99 |
| KRH47899 | Soybean | nucleus | 18.23 | 10.86 |
| KRH41187 | Soybean | nucleus | 18.23 | 10.79 |
| KRH71432 | Soybean | nucleus | 18.77 | 10.72 |
| KRH39540 | Soybean | nucleus | 20.91 | 10.67 |
| KRH32008 | Soybean | extracellular, plastid | 18.77 | 10.54 |
| KRH59908 | Soybean | nucleus | 17.43 | 10.3 |
| KRH48144 | Soybean | nucleus | 15.01 | 8.62 |
| KRH65046 | Soybean | nucleus | 14.48 | 8.35 |
| KRH05127 | Soybean | nucleus, plastid | 6.43 | 8.19 |
Protein Annotations
| EntrezGene:100785572 | MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | EMBL:ACUP02010404 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_17G156100 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| InterPro:IPR011598 | InterPro:IPR036638 | UniProt:K7MLV1 | EnsemblPlants:KRH04348 | ProteinID:KRH04348 | ProteinID:KRH04348.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF75 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI0001BA908C | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr17:+:13272609..13275810
Molecular Weight (calculated)
41498.5 Da
IEP (calculated)
7.222
GRAVY (calculated)
-0.580
Length
373 amino acids
Sequence
(BLAST)
(BLAST)
001: MMQISSNMYM PEFGMEDPTL FHQYPMDSSS ALFQLEDLDF ESFSASPKNS SSHNKRLFNS ESTQNSFHKS PHEQYSVAPP RPTKQNKTVM STTWSAYNAH
101: HHHHDMVAPK ASSSSSSKII SFDQHSNASS VTSQQLYNNV DAAAKVKKPK IETGYGENLD FSAAAAAASQ SICDNNSFLD HYDNQDKKAA ASTTRNPTQA
201: QDHVIAERKR REKLSQRFIA LSAIVPGLKK MDKATVLEDA IKYVKQLQER VKTLEEQAVD KTVESAVFVK RSVVFAGVDS SSSDENSDQS LPEMEARISG
301: KEVLIRIHCD KNSGGAAAIL RELEKHYLTV QSSSFLPFGN NTLDITIVAK MNNDYCLTAK DLIRSLSQCL RQL
101: HHHHDMVAPK ASSSSSSKII SFDQHSNASS VTSQQLYNNV DAAAKVKKPK IETGYGENLD FSAAAAAASQ SICDNNSFLD HYDNQDKKAA ASTTRNPTQA
201: QDHVIAERKR REKLSQRFIA LSAIVPGLKK MDKATVLEDA IKYVKQLQER VKTLEEQAVD KTVESAVFVK RSVVFAGVDS SSSDENSDQS LPEMEARISG
301: KEVLIRIHCD KNSGGAAAIL RELEKHYLTV QSSSFLPFGN NTLDITIVAK MNNDYCLTAK DLIRSLSQCL RQL
001: MATAMNVFST KWSSELDIEE YSIIHQFHMN SLVGDVPQSL SSLDDTTTCY NLDASCNKSL VEERPSKILK TTHISPNLHP FSSSNPPPPK HQPSSRILSF
101: EKTGLHVMNH NSPNLIFSPK DEEIGLPEHK KAELIIRGTK RAQSLTRSQS NAQDHILAER KRREKLTQRF VALSALIPGL KKMDKASVLG DAIKHIKYLQ
201: ESVKEYEEQK KEKTMESVVL VKKSSLVLDE NHQPSSSSSS DGNRNSSSSN LPEIEVRVSG KDVLIKILCE KQKGNVIKIM GEIEKLGLSI TNSNVLPFGP
301: TFDISIIAQK NNNFDMKIED VVKNLSFGLS KLT
101: EKTGLHVMNH NSPNLIFSPK DEEIGLPEHK KAELIIRGTK RAQSLTRSQS NAQDHILAER KRREKLTQRF VALSALIPGL KKMDKASVLG DAIKHIKYLQ
201: ESVKEYEEQK KEKTMESVVL VKKSSLVLDE NHQPSSSSSS DGNRNSSSSN LPEIEVRVSG KDVLIKILCE KQKGNVIKIM GEIEKLGLSI TNSNVLPFGP
301: TFDISIIAQK NNNFDMKIED VVKNLSFGLS KLT
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT2G22750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.