Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21132161
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH06456 | Soybean | nucleus | 84.34 | 85.44 |
| KRH68922 | Soybean | nucleus | 58.15 | 66.18 |
| VIT_15s0046g00320.t01 | Wine grape | nucleus | 61.82 | 64.07 |
| KRG97199 | Soybean | nucleus | 63.26 | 63.97 |
| PGSC0003DMT400000652 | Potato | nucleus | 58.31 | 61.04 |
| Solyc01g096050.2.1 | Tomato | nucleus | 58.63 | 60.66 |
| PGSC0003DMT400018046 | Potato | extracellular, nucleus | 53.19 | 57.61 |
| Solyc05g050560.1.1 | Tomato | nucleus | 52.88 | 57.17 |
| GSMUA_Achr10P... | Banana | nucleus | 41.85 | 57.08 |
| CDY27319 | Canola | nucleus | 37.86 | 53.5 |
| AT1G01260.1 | Thale cress | nucleus | 49.84 | 52.88 |
| GSMUA_Achr8P05350_001 | Banana | nucleus | 37.7 | 52.33 |
| Bra039279.1-P | Field mustard | nucleus | 37.7 | 51.42 |
| CDX90021 | Canola | nucleus | 44.25 | 51.3 |
| CDY66312 | Canola | nucleus | 37.38 | 51.09 |
| Bra033273.1-P | Field mustard | nucleus | 47.28 | 50.68 |
| GSMUA_Achr1P28110_001 | Banana | nucleus | 39.3 | 49.5 |
| GSMUA_Achr8P26280_001 | Banana | cytosol | 36.58 | 49.46 |
| CDY56874 | Canola | nucleus | 38.5 | 49.08 |
| CDX80023 | Canola | nucleus | 38.18 | 49.08 |
| Bra004532.1-P | Field mustard | nucleus | 37.86 | 48.77 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 36.42 | 48.0 |
| AT2G46510.1 | Thale cress | nucleus | 43.13 | 47.7 |
| GSMUA_Achr7P14640_001 | Banana | nucleus | 36.74 | 47.52 |
| Zm00001d009013_P001 | Maize | nucleus | 44.25 | 45.34 |
| EER99993 | Sorghum | nucleus | 44.57 | 44.86 |
| Zm00001d039271_P001 | Maize | nucleus | 44.09 | 44.81 |
| GSMUA_Achr6P35730_001 | Banana | nucleus | 34.98 | 44.6 |
| GSMUA_Achr1P14370_001 | Banana | cytosol, nucleus, plastid | 40.73 | 44.35 |
| TraesCS4A01G028900.1 | Wheat | nucleus | 42.01 | 44.05 |
| TraesCS3A01G158600.1 | Wheat | nucleus | 43.29 | 43.99 |
| TraesCS4D01G275500.1 | Wheat | nucleus | 41.85 | 43.81 |
| TraesCS3B01G185400.1 | Wheat | nucleus | 43.61 | 43.68 |
| TraesCS4B01G276900.1 | Wheat | nucleus | 41.69 | 43.65 |
| TraesCS3D01G166300.2 | Wheat | nucleus | 43.29 | 43.36 |
| Os01t0235700-01 | Rice | nucleus | 41.85 | 42.46 |
| EES19274 | Sorghum | nucleus | 38.98 | 41.57 |
| KRH19522 | Soybean | nucleus | 32.75 | 40.51 |
| KRH32144 | Soybean | nucleus | 31.63 | 39.29 |
| HORVU3Hr1G057280.2 | Barley | nucleus | 43.93 | 35.85 |
| Zm00001d007536_P001 | Maize | plastid | 32.43 | 33.44 |
| KRH06400 | Soybean | nucleus | 21.73 | 29.18 |
| KRH47834 | Soybean | nucleus | 21.57 | 29.09 |
| KRH74418 | Soybean | nucleus | 27.0 | 26.32 |
| KRH75613 | Soybean | nucleus | 26.52 | 26.06 |
| KRH05127 | Soybean | nucleus, plastid | 11.98 | 25.6 |
| KRH45440 | Soybean | nucleus | 26.68 | 25.54 |
| KRH42021 | Soybean | nucleus | 7.35 | 23.59 |
| KRH39540 | Soybean | nucleus | 27.32 | 23.39 |
| KRH28296 | Soybean | nucleus | 11.02 | 19.77 |
| KRH09683 | Soybean | nucleus | 7.99 | 19.08 |
| KRH77192 | Soybean | nucleus | 10.22 | 18.77 |
| KRH00980 | Soybean | nucleus | 6.07 | 18.72 |
| KRH67189 | Soybean | cytosol, mitochondrion, nucleus, plastid | 17.09 | 18.71 |
| KRH04346 | Soybean | nucleus | 11.02 | 18.6 |
| KRH58186 | Soybean | nucleus | 10.54 | 18.28 |
| KRH49880 | Soybean | nucleus | 9.58 | 18.24 |
| KRH04348 | Soybean | nucleus | 10.86 | 18.23 |
| KRH47401 | Soybean | nucleus | 5.91 | 18.23 |
| KRG95511 | Soybean | cytosol, mitochondrion, nucleus, plastid | 17.09 | 18.2 |
| KRH23624 | Soybean | nucleus | 8.15 | 17.96 |
| KRH32008 | Soybean | extracellular, plastid | 19.01 | 17.92 |
| KRH28295 | Soybean | nucleus | 8.95 | 17.89 |
| KRH10664 | Soybean | nucleus | 10.54 | 17.89 |
| KRH44509 | Soybean | nucleus | 6.07 | 17.84 |
| KRH71432 | Soybean | nucleus | 18.53 | 17.76 |
| KRH44511 | Soybean | nucleus | 9.27 | 17.68 |
| KRH66425 | Soybean | nucleus | 8.79 | 17.63 |
| KRH41187 | Soybean | nucleus | 17.57 | 17.46 |
| KRH47399 | Soybean | nucleus | 9.42 | 17.3 |
| KRH21680 | Soybean | nucleus, vacuole | 10.38 | 17.29 |
| KRH58189 | Soybean | nucleus | 10.54 | 17.28 |
| KRH59908 | Soybean | nucleus | 17.41 | 17.27 |
| KRH23623 | Soybean | nucleus | 5.91 | 16.97 |
| KRH48858 | Soybean | nucleus | 8.63 | 16.77 |
| KRH77195 | Soybean | nucleus | 9.74 | 16.58 |
| KRH48860 | Soybean | nucleus | 8.31 | 16.46 |
| KRH44510 | Soybean | nucleus | 7.03 | 16.0 |
| KRH40248 | Soybean | cytosol | 3.67 | 15.97 |
| KRH40246 | Soybean | nucleus, vacuole | 6.71 | 15.56 |
| KRH77193 | Soybean | nucleus | 8.15 | 15.55 |
| KRH48144 | Soybean | nucleus | 16.13 | 15.54 |
| KRH65046 | Soybean | nucleus | 15.81 | 15.3 |
| KRH47400 | Soybean | nucleus | 6.55 | 15.24 |
| KRH00979 | Soybean | nucleus | 7.35 | 15.13 |
| KRH58187 | Soybean | endoplasmic reticulum | 7.99 | 14.88 |
| KRH09685 | Soybean | cytosol | 7.03 | 14.86 |
| KRH23621 | Soybean | nucleus | 6.87 | 14.78 |
| KRH04347 | Soybean | nucleus | 7.83 | 14.37 |
| KRH00981 | Soybean | nucleus | 7.19 | 13.85 |
| KRH48847 | Soybean | nucleus | 8.31 | 13.65 |
| KRH66407 | Soybean | nucleus | 8.47 | 13.59 |
| KRH47398 | Soybean | nucleus | 7.83 | 13.24 |
| KRH44512 | Soybean | nucleus | 7.35 | 12.27 |
Protein Annotations
| EntrezGene:100807078 | MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02004183 | ncoils:Coil | EnsemblPlantsGene:GLYMA_07G055200 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | UniProt:I1KHU7 |
| InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH47899 | ProteinID:KRH47899 | ProteinID:KRH47899.1 | InterPro:MYC/MYB_N |
| PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF47 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI0002337D69 | InterPro:bHLH_dom | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr7:+:4869985..4872850
Molecular Weight (calculated)
69027.1 Da
IEP (calculated)
6.795
GRAVY (calculated)
-0.374
Length
626 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIEVGLGGV WDEEEKATVM EVLGRGAFDY LVANSVSNEN LLMAFGCGEN MQNKLSDLVE RPNSSNFSWN YAIFWQISQS KYGDWVLGWG DGCCREPREG
101: EEGGGEVRRV RVVFDDDDEK VQRMRKGVLQ KLHMTFGGSD EDNYAFGLDR VTDTEMFFLA SMYFSFPRGL GGPGKCFASG KHLWVSDVLK SSFDYCVRSF
201: LAKSAGIQTV VLVPTDFGVV EMGSVRMVGE SFELLQAVKS VFSAQASSLL VPHMVKPIAP LDLVREKRDG SESANALLSG LAIGDKNKNI NNNSRVEGIG
301: VPKIFGQDLN CVTQFREKLA VRKMEERPRP WGGHPPNVNS IGFPNGVQGS SWGAGQVVRH LGPPEMLAPR LASSGTLPKL ANGARHDFVH NNFEQQRPVQ
401: MQIDFSGATS RAASGRSIIA ESEISDVEAT CKEERVSVAD DRRPRKRGRK PANGREEPLN HVEAERQRRE KLNQRFYALR AVVPNISKMD KASLLGDAIA
501: YINELQAKLK TIESERERFG STSMDGPELE ANARVENHHN GTPDVDVQVA QDGVIVKVSC PIDVHPVSKV IQTFKDAEIG VVESKVTATN VSVFHTFVVK
601: SQGPDQLTKD KLIALFSKES STIKTL
101: EEGGGEVRRV RVVFDDDDEK VQRMRKGVLQ KLHMTFGGSD EDNYAFGLDR VTDTEMFFLA SMYFSFPRGL GGPGKCFASG KHLWVSDVLK SSFDYCVRSF
201: LAKSAGIQTV VLVPTDFGVV EMGSVRMVGE SFELLQAVKS VFSAQASSLL VPHMVKPIAP LDLVREKRDG SESANALLSG LAIGDKNKNI NNNSRVEGIG
301: VPKIFGQDLN CVTQFREKLA VRKMEERPRP WGGHPPNVNS IGFPNGVQGS SWGAGQVVRH LGPPEMLAPR LASSGTLPKL ANGARHDFVH NNFEQQRPVQ
401: MQIDFSGATS RAASGRSIIA ESEISDVEAT CKEERVSVAD DRRPRKRGRK PANGREEPLN HVEAERQRRE KLNQRFYALR AVVPNISKMD KASLLGDAIA
501: YINELQAKLK TIESERERFG STSMDGPELE ANARVENHHN GTPDVDVQVA QDGVIVKVSC PIDVHPVSKV IQTFKDAEIG VVESKVTATN VSVFHTFVVK
601: SQGPDQLTKD KLIALFSKES STIKTL
001: MNIGRLVWNE DDKAIVASLL GKRALDYLLS NSVSNANLLM TLGSDENLQN KLSDLVERPN ASNFSWNYAI FWQISRSKAG DLVLCWGDGY CREPKEGEKS
101: EIVRILSMGR EEETHQTMRK RVLQKLHDLF GGSEEENCAL GLDRVTDTEM FLLSSMYFSF PRGEGGPGKC FASAKPVWLS DVVNSGSDYC VRSFLAKSAG
201: IQTVVLVPTD LGVVELGSTS CLPESEDSIL SIRSLFTSSL PPVRAVALPV TVAEKIDDNR TKIFGKDLHN SGFLQHHQHH QQQQQQPPQQ QQHRQFREKL
301: TVRKMDDRAP KRLDAYPNNG NRFMFSNPGT NNNTLLSPTW VQPENYTRPI NVKEVPSTDE FKFLPLQQSS QRLLPPAQMQ IDFSAASSRA SENNSDGEGG
401: GEWADAVGAD ESGNNRPRKR GRRPANGRAE ALNHVEAERQ RREKLNQRFY ALRSVVPNIS KMDKASLLGD AVSYINELHA KLKVMEAERE RLGYSSNPPI
501: SLDSDINVQT SGEDVTVRIN CPLESHPASR IFHAFEESKV EVINSNLEVS QDTVLHTFVV KSEELTKEKL ISALSREQTN SVQSRTSSGR
101: EIVRILSMGR EEETHQTMRK RVLQKLHDLF GGSEEENCAL GLDRVTDTEM FLLSSMYFSF PRGEGGPGKC FASAKPVWLS DVVNSGSDYC VRSFLAKSAG
201: IQTVVLVPTD LGVVELGSTS CLPESEDSIL SIRSLFTSSL PPVRAVALPV TVAEKIDDNR TKIFGKDLHN SGFLQHHQHH QQQQQQPPQQ QQHRQFREKL
301: TVRKMDDRAP KRLDAYPNNG NRFMFSNPGT NNNTLLSPTW VQPENYTRPI NVKEVPSTDE FKFLPLQQSS QRLLPPAQMQ IDFSAASSRA SENNSDGEGG
401: GEWADAVGAD ESGNNRPRKR GRRPANGRAE ALNHVEAERQ RREKLNQRFY ALRSVVPNIS KMDKASLLGD AVSYINELHA KLKVMEAERE RLGYSSNPPI
501: SLDSDINVQT SGEDVTVRIN CPLESHPASR IFHAFEESKV EVINSNLEVS QDTVLHTFVV KSEELTKEKL ISALSREQTN SVQSRTSSGR
Arabidopsis Description
BHLH13Transcription factor bHLH13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.