Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY56874 | Canola | nucleus | 68.2 | 78.62 |
| CDX80023 | Canola | nucleus | 67.49 | 78.44 |
| Bra004532.1-P | Field mustard | nucleus | 66.61 | 77.57 |
| CDY66312 | Canola | nucleus | 61.13 | 75.55 |
| Bra039279.1-P | Field mustard | nucleus | 60.6 | 74.73 |
| CDY27319 | Canola | nucleus | 58.48 | 74.72 |
| VIT_15s0046g00320.t01 | Wine grape | nucleus | 54.77 | 51.32 |
| KRH68922 | Soybean | nucleus | 48.76 | 50.18 |
| PGSC0003DMT400000652 | Potato | nucleus | 50.71 | 47.99 |
| GSMUA_Achr10P... | Banana | nucleus | 38.69 | 47.71 |
| Solyc01g096050.2.1 | Tomato | nucleus | 50.53 | 47.27 |
| PGSC0003DMT400018046 | Potato | extracellular, nucleus | 47.17 | 46.19 |
| AT1G01260.1 | Thale cress | nucleus | 48.06 | 46.1 |
| GSMUA_Achr8P05350_001 | Banana | nucleus | 36.57 | 45.9 |
| KRG97199 | Soybean | nucleus | 49.82 | 45.56 |
| Solyc05g050560.1.1 | Tomato | nucleus | 46.11 | 45.08 |
| KRH47899 | Soybean | nucleus | 47.7 | 43.13 |
| GSMUA_Achr1P28110_001 | Banana | nucleus | 37.81 | 43.06 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 35.87 | 42.74 |
| KRH06456 | Soybean | nucleus | 46.64 | 42.72 |
| GSMUA_Achr8P26280_001 | Banana | cytosol | 34.81 | 42.55 |
| GSMUA_Achr6P35730_001 | Banana | nucleus | 34.28 | 39.51 |
| GSMUA_Achr7P14640_001 | Banana | nucleus | 33.39 | 39.05 |
| GSMUA_Achr1P14370_001 | Banana | cytosol, nucleus, plastid | 39.58 | 38.96 |
| TraesCS4D01G275500.1 | Wheat | nucleus | 38.34 | 36.29 |
| AT4G16430.1 | Thale cress | nucleus | 29.86 | 36.19 |
| TraesCS4A01G028900.1 | Wheat | nucleus | 38.16 | 36.18 |
| Zm00001d009013_P001 | Maize | nucleus | 38.87 | 36.01 |
| TraesCS4B01G276900.1 | Wheat | nucleus | 37.99 | 35.95 |
| Zm00001d039271_P001 | Maize | nucleus | 39.05 | 35.88 |
| EER99993 | Sorghum | nucleus | 38.87 | 35.37 |
| Os01t0235700-01 | Rice | nucleus | 38.52 | 35.33 |
| TraesCS3A01G158600.1 | Wheat | nucleus | 38.16 | 35.06 |
| TraesCS3D01G166300.2 | Wheat | nucleus | 38.52 | 34.88 |
| TraesCS3B01G185400.1 | Wheat | nucleus | 38.34 | 34.72 |
| EES19274 | Sorghum | nucleus | 35.51 | 34.24 |
| HORVU3Hr1G057280.2 | Barley | nucleus | 38.69 | 28.55 |
| AT4G17880.1 | Thale cress | nucleus | 27.92 | 26.83 |
| AT5G46760.1 | Thale cress | nucleus | 27.56 | 26.35 |
| AT4G00870.1 | Thale cress | nucleus, plastid | 19.61 | 26.24 |
| AT5G46830.1 | Thale cress | nucleus | 23.67 | 26.22 |
| AT1G32640.1 | Thale cress | nucleus | 27.74 | 25.2 |
| Zm00001d007536_P001 | Maize | plastid | 26.15 | 24.38 |
| AT1G63650.1 | Thale cress | nucleus | 20.14 | 19.13 |
| AT4G09820.1 | Thale cress | nucleus | 17.31 | 18.92 |
| AT4G37850.1 | Thale cress | nucleus | 9.72 | 16.77 |
| AT5G41315.2 | Thale cress | nucleus | 18.9 | 16.59 |
| AT2G22750.3 | Thale cress | nucleus | 9.54 | 16.22 |
| AT4G00480.2 | Thale cress | nucleus | 15.72 | 15.34 |
| AT2G22770.1 | Thale cress | nucleus | 8.48 | 15.0 |
| AT2G22760.1 | Thale cress | nucleus | 7.24 | 13.9 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | EntrezGene:819262 | UniProt:A0A178VP13 | ProteinID:AAD20162.2 |
| ProteinID:AAM15265.1 | ProteinID:AEC10712.1 | ArrayExpress:AT2G46510 | EnsemblPlantsGene:AT2G46510 | RefSeq:AT2G46510 | TAIR:AT2G46510 |
| RefSeq:AT2G46510-TAIR-G | EnsemblPlants:AT2G46510.1 | TAIR:AT2G46510.1 | Symbol:ATAIB | EMBL:AY094399 | Unigene:At.19872 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 | GO:GO:0003700 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 |
| GO:GO:0006351 | GO:GO:0006355 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009611 | GO:GO:0009719 | GO:GO:0009737 | GO:GO:0009738 |
| GO:GO:0009987 | GO:GO:0010629 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 |
| InterPro:MYC/MYB_N | RefSeq:NP_566078.1 | ProteinID:OAP08147.1 | PFAM:PF00010 | PFAM:PF14215 | PO:PO:0000013 |
| PO:PO:0000025 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000252 | PO:PO:0000293 | PO:PO:0001054 |
| PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0009062 | PO:PO:0009066 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020127 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PFscan:PS50888 | PANTHER:PTHR11514 |
| PANTHER:PTHR11514:SF69 | UniProt:Q9ZPY8 | SMART:SM00353 | SUPFAM:SSF47459 | UniParc:UPI00000A023B | InterPro:bHLH_dom |
| SEG:seg | : | : | : | : | : |
Description
AIBTranscription factor ABA-INDUCIBLE bHLH-TYPE [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY8]
Coordinates
chr2:-:19090953..19093373
Molecular Weight (calculated)
63308.4 Da
IEP (calculated)
5.332
GRAVY (calculated)
-0.537
Length
566 amino acids
Sequence
(BLAST)
(BLAST)
001: MNMSDLGWDD EDKSVVSAVL GHLASDFLRA NSNSNQNLFL VMGTDDTLNK KLSSLVDWPN SENFSWNYAI FWQQTMSRSG QQVLGWGDGC CREPNEEEES
101: KVVRSYNFNN MGAEEETWQD MRKRVLQKLH RLFGGSDEDN YALSLEKVTA TEIFFLASMY FFFNHGEGGP GRCYSSGKHV WLSDAVNSES DYCFRSFMAK
201: SAGIRTIVMV PTDAGVLELG SVWSLPENIG LVKSVQALFM RRVTQPVMVT SNTNMTGGIH KLFGQDLSGA HAYPKKLEVR RNLDERFTPQ SWEGYNNNKG
301: PTFGYTPQRD DVKVLENVNM VVDNNNYKTQ IEFAGSSVAA SSNPSTNTQQ EKSESCTEKR PVSLLAGAGI VSVVDEKRPR KRGRKPANGR EEPLNHVEAE
401: RQRREKLNQR FYALRSVVPN ISKMDKASLL GDAISYIKEL QEKVKIMEDE RVGTDKSLSE SNTITVEESP EVDIQAMNEE VVVRVISPLD SHPASRIIQA
501: MRNSNVSLME AKLSLAEDTM FHTFVIKSNN GSDPLTKEKL IAAFYPETSS TQPPLPSSSS QVSGDI
101: KVVRSYNFNN MGAEEETWQD MRKRVLQKLH RLFGGSDEDN YALSLEKVTA TEIFFLASMY FFFNHGEGGP GRCYSSGKHV WLSDAVNSES DYCFRSFMAK
201: SAGIRTIVMV PTDAGVLELG SVWSLPENIG LVKSVQALFM RRVTQPVMVT SNTNMTGGIH KLFGQDLSGA HAYPKKLEVR RNLDERFTPQ SWEGYNNNKG
301: PTFGYTPQRD DVKVLENVNM VVDNNNYKTQ IEFAGSSVAA SSNPSTNTQQ EKSESCTEKR PVSLLAGAGI VSVVDEKRPR KRGRKPANGR EEPLNHVEAE
401: RQRREKLNQR FYALRSVVPN ISKMDKASLL GDAISYIKEL QEKVKIMEDE RVGTDKSLSE SNTITVEESP EVDIQAMNEE VVVRVISPLD SHPASRIIQA
501: MRNSNVSLME AKLSLAEDTM FHTFVIKSNN GSDPLTKEKL IAAFYPETSS TQPPLPSSSS QVSGDI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.