Factsheet for Bra039279.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY66312	Canola	nucleus	98.26	98.47
Bra004532.1-P	Field mustard	nucleus	74.95	70.78
AT2G46510.1	Thale cress	nucleus	74.73	60.6
GSMUA_Achr10P...	Banana	nucleus	44.01	44.01
KRH68922	Soybean	nucleus	51.63	43.09
VIT_15s0046g00320.t01	Wine grape	nucleus	55.34	42.05
GSMUA_Achr8P05350_001	Banana	nucleus	40.74	41.46
PGSC0003DMT400018046	Potato	extracellular, nucleus	51.63	41.0
PGSC0003DMT400000652	Potato	nucleus	52.72	40.47
GSMUA_Achr1P28110_001	Banana	nucleus	43.57	40.24
Solyc01g096050.2.1	Tomato	nucleus	52.94	40.17
Solyc05g050560.1.1	Tomato	nucleus	50.54	40.07
GSMUA_AchrUn_...	Banana	cytosol, nucleus, plastid	40.52	39.16
GSMUA_Achr8P26280_001	Banana	cytosol	39.43	39.09
KRG97199	Soybean	nucleus	51.63	38.29
GSMUA_Achr6P35730_001	Banana	nucleus	40.74	38.09
Bra033273.1-P	Field mustard	nucleus	48.37	38.01
KRH47899	Soybean	nucleus	51.42	37.7
Bra038458.1-P	Field mustard	nucleus	37.04	37.69
KRH06456	Soybean	nucleus	50.54	37.54
Bra012720.1-P	Field mustard	nucleus	37.04	37.28
GSMUA_Achr7P14640_001	Banana	nucleus	38.78	36.78
Bra017527.1-P	Field mustard	nucleus	17.65	35.84
Zm00001d009013_P001	Maize	nucleus	45.1	33.88
GSMUA_Achr1P14370_001	Banana	cytosol, nucleus, plastid	42.05	33.57
Zm00001d039271_P001	Maize	nucleus	44.88	33.44
EER99993	Sorghum	nucleus	44.88	33.12
TraesCS4D01G275500.1	Wheat	nucleus	43.14	33.11
TraesCS4A01G028900.1	Wheat	nucleus	42.92	33.0
TraesCS4B01G276900.1	Wheat	nucleus	42.7	32.78
TraesCS3A01G158600.1	Wheat	nucleus	43.36	32.31
Os01t0235700-01	Rice	nucleus	43.36	32.25
TraesCS3D01G166300.2	Wheat	nucleus	43.79	32.16
TraesCS3B01G185400.1	Wheat	nucleus	43.57	32.0
EES19274	Sorghum	nucleus	39.87	31.18
Bra013263.1-P	Field mustard	nucleus	17.43	29.52
Bra024993.1-P	Field mustard	nucleus	23.31	28.38
HORVU3Hr1G057280.2	Barley	nucleus	43.79	26.21
Bra010178.1-P	Field mustard	nucleus	34.2	26.17
Bra024998.1-P	Field mustard	nucleus	32.68	25.86
Bra017523.1-P	Field mustard	nucleus	28.54	25.84
Bra017520.1-P	Field mustard	nucleus	27.89	25.7
Bra024992.1-P	Field mustard	nucleus	15.03	25.46
Bra013264.1-P	Field mustard	nucleus	15.69	24.24
Zm00001d007536_P001	Maize	plastid	29.19	22.08
Bra013128.1-P	Field mustard	nucleus	11.33	19.48
Bra039924.1-P	Field mustard	nucleus	12.42	18.21
Bra027653.1-P	Field mustard	nucleus	22.88	17.62
Bra010617.1-P	Field mustard	nucleus	12.42	17.07
Bra011790.1-P	Field mustard	nucleus	12.42	16.96
Bra027796.1-P	Field mustard	nucleus	22.22	16.83
Bra030210.1-P	Field mustard	nucleus	11.76	16.77
Bra037887.1-P	Field mustard	nucleus	17.65	16.3
Bra025508.1-P	Field mustard	nucleus	21.35	15.58
Bra039927.1-P	Field mustard	nucleus	10.68	15.51
Bra030207.1-P	Field mustard	nucleus	10.68	15.03
Bra039926.1-P	Field mustard	nucleus	9.37	14.83
Bra030208.1-P	Field mustard	nucleus	9.8	14.8
Bra000970.1-P	Field mustard	nucleus	18.3	12.84
Bra037343.1-P	Field mustard	cytosol	16.34	10.55

Protein Annotations

MapMan:15.5.32	MapMan:25.4.1.7	Gene3D:4.10.280.10	EnsemblPlantsGene:Bra039279	EnsemblPlants:Bra039279.1	EnsemblPlants:Bra039279.1-P
ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0046983	InterPro:HLH_DNA-bd_sf
InterPro:IPR011598	InterPro:IPR036638	UniProt:M4FDV8	InterPro:MYC/MYB_N	PFAM:PF00010	PFAM:PF14215
PFscan:PS50888	PANTHER:PTHR11514	PANTHER:PTHR11514:SF69	SMART:SM00353	SUPFAM:SSF47459	UniParc:UPI0002544633
InterPro:bHLH_dom	SEG:seg	:	:	:	:

Description

AT2G46510 (E=1e-094) ATAIB | ATAIB (ABA-INDUCIBLE BHLH-TYPE TRANSCRIPTION FACTOR); DNA binding / transcription factor

Coordinates

chrA04:-:18772406..18773785

Molecular Weight (calculated)

51303.4 Da

IEP (calculated)

5.040

GRAVY (calculated)

-0.427

Length

459 amino acids

Sequence
(BLAST)

001: MNDLGWDEEE TSMANAILGN SASDFLKTIS SSNQNLFLLM ETDDSLNKKL SSLVEWPNSE NFSWNYAILW QQTVSRSGHR VLGWGDGCCR EPKEEESSVC
101: NCPSSTLEEE EMRKRVLQNL QRVFGESDED NYALSLERVT ATETFFLASM YFFFNHGEGG PGKCFASGRH VWWVDSGDDY CFRSFMARSA GIRTVVMVNT
201: EVGVVELGSV WSLPENLELV KSVQSLFTRR AEPPLVVHKL FGQELNVVGS STNNQLRKSD SCNENRPVSL LAVGGGGGGC VVEEKRPKKR GRKPANGREE
301: PLNHVEAERQ RREKLNQRFY ALRAVVPNIS KMDKASLLED AISYIKELQE RVKIIEAEGV RRESTEVEIQ AVEEEVVVRV ISPLETHPVS RIVQAMRNSE
401: VSVMESKLSS AEETVFHTFV VRSSNGSDPL TREKLIAAAA AYPQQPLVPS HSSQVSGDL

Best Arabidopsis Sequence Match ( AT2G46510.1 )
(BLAST)

001: MNMSDLGWDD EDKSVVSAVL GHLASDFLRA NSNSNQNLFL VMGTDDTLNK KLSSLVDWPN SENFSWNYAI FWQQTMSRSG QQVLGWGDGC CREPNEEEES
101: KVVRSYNFNN MGAEEETWQD MRKRVLQKLH RLFGGSDEDN YALSLEKVTA TEIFFLASMY FFFNHGEGGP GRCYSSGKHV WLSDAVNSES DYCFRSFMAK
201: SAGIRTIVMV PTDAGVLELG SVWSLPENIG LVKSVQALFM RRVTQPVMVT SNTNMTGGIH KLFGQDLSGA HAYPKKLEVR RNLDERFTPQ SWEGYNNNKG
301: PTFGYTPQRD DVKVLENVNM VVDNNNYKTQ IEFAGSSVAA SSNPSTNTQQ EKSESCTEKR PVSLLAGAGI VSVVDEKRPR KRGRKPANGR EEPLNHVEAE
401: RQRREKLNQR FYALRSVVPN ISKMDKASLL GDAISYIKEL QEKVKIMEDE RVGTDKSLSE SNTITVEESP EVDIQAMNEE VVVRVISPLD SHPASRIIQA
501: MRNSNVSLME AKLSLAEDTM FHTFVIKSNN GSDPLTKEKL IAAFYPETSS TQPPLPSSSS QVSGDI

Arabidopsis Description

AIBTranscription factor ABA-INDUCIBLE bHLH-TYPE [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPY8]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.