Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH68922 | Soybean | nucleus | 74.64 | 84.0 |
| KRH47899 | Soybean | nucleus | 63.97 | 63.26 |
| KRH06456 | Soybean | nucleus | 62.84 | 62.95 |
| VIT_15s0046g00320.t01 | Wine grape | nucleus | 61.07 | 62.58 |
| Solyc01g096050.2.1 | Tomato | nucleus | 57.67 | 59.01 |
| PGSC0003DMT400000652 | Potato | nucleus | 56.7 | 58.7 |
| PGSC0003DMT400018046 | Potato | extracellular, nucleus | 53.96 | 57.79 |
| Solyc05g050560.1.1 | Tomato | nucleus | 53.47 | 57.17 |
| GSMUA_Achr10P... | Banana | nucleus | 41.68 | 56.21 |
| CDY27319 | Canola | nucleus | 37.96 | 53.05 |
| CDX80023 | Canola | nucleus | 40.87 | 51.95 |
| Bra004532.1-P | Field mustard | nucleus | 40.71 | 51.85 |
| CDY66312 | Canola | nucleus | 38.29 | 51.75 |
| Bra039279.1-P | Field mustard | nucleus | 38.29 | 51.63 |
| CDY56874 | Canola | nucleus | 40.71 | 51.32 |
| CDX90021 | Canola | nucleus | 44.75 | 51.3 |
| GSMUA_Achr8P05350_001 | Banana | nucleus | 37.0 | 50.78 |
| AT1G01260.1 | Thale cress | nucleus | 47.66 | 50.0 |
| AT2G46510.1 | Thale cress | nucleus | 45.56 | 49.82 |
| Bra033273.1-P | Field mustard | nucleus | 46.85 | 49.66 |
| GSMUA_Achr8P26280_001 | Banana | cytosol | 36.51 | 48.81 |
| GSMUA_Achr1P28110_001 | Banana | nucleus | 39.1 | 48.69 |
| GSMUA_Achr7P14640_001 | Banana | nucleus | 37.8 | 48.35 |
| GSMUA_AchrUn_... | Banana | cytosol, nucleus, plastid | 36.03 | 46.95 |
| GSMUA_Achr1P14370_001 | Banana | cytosol, nucleus, plastid | 40.71 | 43.83 |
| GSMUA_Achr6P35730_001 | Banana | nucleus | 34.57 | 43.58 |
| TraesCS4D01G275500.1 | Wheat | nucleus | 40.39 | 41.81 |
| EER99993 | Sorghum | nucleus | 42.0 | 41.8 |
| Zm00001d009013_P001 | Maize | nucleus | 41.2 | 41.73 |
| TraesCS4B01G276900.1 | Wheat | nucleus | 40.23 | 41.64 |
| TraesCS4A01G028900.1 | Wheat | nucleus | 40.06 | 41.54 |
| TraesCS3A01G158600.1 | Wheat | nucleus | 41.2 | 41.4 |
| Zm00001d039271_P001 | Maize | nucleus | 41.2 | 41.4 |
| Os01t0235700-01 | Rice | nucleus | 41.2 | 41.33 |
| TraesCS3D01G166300.2 | Wheat | nucleus | 41.36 | 40.96 |
| TraesCS3B01G185400.1 | Wheat | nucleus | 41.36 | 40.96 |
| KRH19522 | Soybean | nucleus | 33.44 | 40.91 |
| KRH32144 | Soybean | nucleus | 33.12 | 40.67 |
| EES19274 | Sorghum | nucleus | 36.35 | 38.33 |
| HORVU3Hr1G057280.2 | Barley | nucleus | 41.68 | 33.64 |
| Zm00001d007536_P001 | Maize | plastid | 28.92 | 29.49 |
| KRH06400 | Soybean | nucleus | 21.16 | 28.11 |
| KRH47834 | Soybean | nucleus | 20.68 | 27.59 |
| KRH05127 | Soybean | nucleus, plastid | 12.28 | 25.94 |
| KRH75613 | Soybean | nucleus | 25.52 | 24.8 |
| KRH45440 | Soybean | nucleus | 25.69 | 24.31 |
| KRH74418 | Soybean | nucleus | 25.2 | 24.3 |
| KRH42021 | Soybean | nucleus | 7.11 | 22.56 |
| KRH39540 | Soybean | nucleus | 25.36 | 21.48 |
| KRH28296 | Soybean | nucleus | 11.47 | 20.34 |
| KRH67189 | Soybean | cytosol, mitochondrion, nucleus, plastid | 18.26 | 19.76 |
| KRG95511 | Soybean | cytosol, mitochondrion, nucleus, plastid | 18.42 | 19.39 |
| KRH77192 | Soybean | nucleus | 10.5 | 19.06 |
| KRH49880 | Soybean | nucleus | 9.85 | 18.54 |
| KRH71432 | Soybean | nucleus | 19.39 | 18.38 |
| KRH04346 | Soybean | nucleus | 10.99 | 18.33 |
| KRH58186 | Soybean | nucleus | 10.66 | 18.28 |
| KRH04348 | Soybean | nucleus | 10.99 | 18.23 |
| KRH28295 | Soybean | nucleus | 9.21 | 18.21 |
| KRH41187 | Soybean | nucleus | 18.42 | 18.1 |
| KRH32008 | Soybean | extracellular, plastid | 19.39 | 18.07 |
| KRH59908 | Soybean | nucleus | 18.09 | 17.75 |
| KRH00980 | Soybean | nucleus | 5.82 | 17.73 |
| KRH10664 | Soybean | nucleus | 10.5 | 17.62 |
| KRH23623 | Soybean | nucleus | 6.14 | 17.43 |
| KRH21680 | Soybean | nucleus, vacuole | 10.5 | 17.29 |
| KRH09683 | Soybean | nucleus | 7.27 | 17.18 |
| KRH58189 | Soybean | nucleus | 10.5 | 17.02 |
| KRH23624 | Soybean | nucleus | 7.75 | 16.9 |
| KRH44509 | Soybean | nucleus | 5.82 | 16.9 |
| KRH77195 | Soybean | nucleus | 10.02 | 16.85 |
| KRH77193 | Soybean | nucleus | 8.89 | 16.77 |
| KRH47401 | Soybean | nucleus | 5.49 | 16.75 |
| KRH66425 | Soybean | nucleus | 8.4 | 16.67 |
| KRH44510 | Soybean | nucleus | 7.27 | 16.36 |
| KRH47400 | Soybean | nucleus | 7.11 | 16.36 |
| KRH40248 | Soybean | cytosol | 3.72 | 15.97 |
| KRH44511 | Soybean | nucleus | 8.4 | 15.85 |
| KRH47399 | Soybean | nucleus | 8.72 | 15.84 |
| KRH48858 | Soybean | nucleus | 8.08 | 15.53 |
| KRH48144 | Soybean | nucleus | 15.99 | 15.23 |
| KRH48860 | Soybean | nucleus | 7.75 | 15.19 |
| KRH58187 | Soybean | endoplasmic reticulum | 8.24 | 15.18 |
| KRH65046 | Soybean | nucleus | 15.83 | 15.15 |
| KRH04347 | Soybean | nucleus | 8.24 | 14.96 |
| KRH40246 | Soybean | nucleus, vacuole | 6.3 | 14.44 |
| KRH09685 | Soybean | cytosol | 6.62 | 13.85 |
| KRH23621 | Soybean | nucleus | 6.46 | 13.75 |
| KRH00981 | Soybean | nucleus | 7.11 | 13.54 |
| KRH00979 | Soybean | nucleus | 6.62 | 13.49 |
| KRH47398 | Soybean | nucleus | 7.92 | 13.24 |
| KRH66407 | Soybean | nucleus | 8.24 | 13.08 |
| KRH48847 | Soybean | nucleus | 7.92 | 12.86 |
| KRH44512 | Soybean | nucleus | 7.43 | 12.27 |
Protein Annotations
| EntrezGene:100801502 | MapMan:15.5.32 | Gene3D:4.10.280.10 | EMBL:ACUP02012180 | ncoils:Coil | EnsemblPlantsGene:GLYMA_19G256700 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 |
| InterPro:IPR036638 | UniProt:K7N0C2 | EnsemblPlants:KRG97199 | ProteinID:KRG97199 | ProteinID:KRG97199.1 | InterPro:MYC/MYB_N |
| PFAM:PF00010 | PFAM:PF14215 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF47 | SMART:SM00353 |
| SUPFAM:SSF47459 | UniParc:UPI000233EE83 | InterPro:bHLH_dom | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr19:-:50067546..50070156
Molecular Weight (calculated)
68278.8 Da
IEP (calculated)
6.409
GRAVY (calculated)
-0.401
Length
619 amino acids
Sequence
(BLAST)
(BLAST)
001: MKLDAGVVWD DEDKAMLGAV LGGRALEFLM ANWLSNESVL MAVGSEEGLQ NKLSDLVERP NVSNFSWNYS IFWQLSHSKS GDWVLGWGDG CCREPSEEEE
101: GSLGRGTLRL LRVDEEMQQR MRKRVLQKLH TTFGGEDEDN YAFGLDHVTD TEMFFLASMY FSFPRGHGGP GKCFASGKHL WLKSVSDYCV RSSLASSAGI
201: QTIVLVPTDM GVVELGSVRM LPESFELLQA VKSVFSTQSP SYQGVSVSTG GNAVFPGLAI GDANKVDGGV SIPKVFVNTI GNRTHFREKL AVRKMEDNRP
301: WPGHGHPDPN GNNLHNNVSF PNVRGNSLHV SSWAVNSDLR QPGPLEIFAP RAPTSSVLAE LANVGKQDFR PQRQVQMQID FTGATSRPSS ARPVVGELEL
401: SDVEASCREE QQPSFADERK PRKRGRKPAN GREAPLNHVE AERQRREKLN QRFYALRSVV PNISKMDKAS LLGDAIAYIN ELQAKVRIME AEKERFGSTS
501: NDGSVLEAKL RLENQEKKAP DVDIQAFQDE VIVKVSCPLD SHPVSKVIQT FNEAQISVVE SKLAAANDTI FHTFVIKSQG PEQLTKDKLI AVFSPTESNS
601: LQPLSQLDSK GIAVSIVHT
101: GSLGRGTLRL LRVDEEMQQR MRKRVLQKLH TTFGGEDEDN YAFGLDHVTD TEMFFLASMY FSFPRGHGGP GKCFASGKHL WLKSVSDYCV RSSLASSAGI
201: QTIVLVPTDM GVVELGSVRM LPESFELLQA VKSVFSTQSP SYQGVSVSTG GNAVFPGLAI GDANKVDGGV SIPKVFVNTI GNRTHFREKL AVRKMEDNRP
301: WPGHGHPDPN GNNLHNNVSF PNVRGNSLHV SSWAVNSDLR QPGPLEIFAP RAPTSSVLAE LANVGKQDFR PQRQVQMQID FTGATSRPSS ARPVVGELEL
401: SDVEASCREE QQPSFADERK PRKRGRKPAN GREAPLNHVE AERQRREKLN QRFYALRSVV PNISKMDKAS LLGDAIAYIN ELQAKVRIME AEKERFGSTS
501: NDGSVLEAKL RLENQEKKAP DVDIQAFQDE VIVKVSCPLD SHPVSKVIQT FNEAQISVVE SKLAAANDTI FHTFVIKSQG PEQLTKDKLI AVFSPTESNS
601: LQPLSQLDSK GIAVSIVHT
001: MNIGRLVWNE DDKAIVASLL GKRALDYLLS NSVSNANLLM TLGSDENLQN KLSDLVERPN ASNFSWNYAI FWQISRSKAG DLVLCWGDGY CREPKEGEKS
101: EIVRILSMGR EEETHQTMRK RVLQKLHDLF GGSEEENCAL GLDRVTDTEM FLLSSMYFSF PRGEGGPGKC FASAKPVWLS DVVNSGSDYC VRSFLAKSAG
201: IQTVVLVPTD LGVVELGSTS CLPESEDSIL SIRSLFTSSL PPVRAVALPV TVAEKIDDNR TKIFGKDLHN SGFLQHHQHH QQQQQQPPQQ QQHRQFREKL
301: TVRKMDDRAP KRLDAYPNNG NRFMFSNPGT NNNTLLSPTW VQPENYTRPI NVKEVPSTDE FKFLPLQQSS QRLLPPAQMQ IDFSAASSRA SENNSDGEGG
401: GEWADAVGAD ESGNNRPRKR GRRPANGRAE ALNHVEAERQ RREKLNQRFY ALRSVVPNIS KMDKASLLGD AVSYINELHA KLKVMEAERE RLGYSSNPPI
501: SLDSDINVQT SGEDVTVRIN CPLESHPASR IFHAFEESKV EVINSNLEVS QDTVLHTFVV KSEELTKEKL ISALSREQTN SVQSRTSSGR
101: EIVRILSMGR EEETHQTMRK RVLQKLHDLF GGSEEENCAL GLDRVTDTEM FLLSSMYFSF PRGEGGPGKC FASAKPVWLS DVVNSGSDYC VRSFLAKSAG
201: IQTVVLVPTD LGVVELGSTS CLPESEDSIL SIRSLFTSSL PPVRAVALPV TVAEKIDDNR TKIFGKDLHN SGFLQHHQHH QQQQQQPPQQ QQHRQFREKL
301: TVRKMDDRAP KRLDAYPNNG NRFMFSNPGT NNNTLLSPTW VQPENYTRPI NVKEVPSTDE FKFLPLQQSS QRLLPPAQMQ IDFSAASSRA SENNSDGEGG
401: GEWADAVGAD ESGNNRPRKR GRRPANGRAE ALNHVEAERQ RREKLNQRFY ALRSVVPNIS KMDKASLLGD AVSYINELHA KLKVMEAERE RLGYSSNPPI
501: SLDSDINVQT SGEDVTVRIN CPLESHPASR IFHAFEESKV EVINSNLEVS QDTVLHTFVV KSEELTKEKL ISALSREQTN SVQSRTSSGR
Arabidopsis Description
BHLH13Transcription factor bHLH13 [Source:UniProtKB/Swiss-Prot;Acc:Q9LNJ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.