Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G22760.1 | KRH39574 | AT1G32230.1 | 19548978 |
| AT2G22760.1 | KRH74370 | AT1G32230.1 | 19548978 |
| AT2G22760.1 | KRH74373 | AT1G32230.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH77192 | Soybean | nucleus | 84.81 | 86.8 |
| KRH58186 | Soybean | nucleus | 57.31 | 55.4 |
| KRH04348 | Soybean | nucleus | 58.17 | 54.42 |
| VIT_07s0205g00170.t01 | Wine grape | cytosol | 17.48 | 48.41 |
| KRH40248 | Soybean | cytosol | 17.19 | 41.67 |
| KRH42021 | Soybean | nucleus | 21.49 | 38.46 |
| KRH10664 | Soybean | nucleus | 39.54 | 37.4 |
| KRH49880 | Soybean | nucleus | 34.67 | 36.78 |
| KRH21680 | Soybean | nucleus, vacuole | 39.26 | 36.44 |
| KRH28295 | Soybean | nucleus | 32.66 | 36.42 |
| KRH77193 | Soybean | nucleus | 33.52 | 35.67 |
| KRH09683 | Soybean | nucleus | 26.36 | 35.11 |
| KRH58189 | Soybean | nucleus | 37.54 | 34.29 |
| KRH23623 | Soybean | nucleus | 21.2 | 33.95 |
| KRH23624 | Soybean | nucleus | 27.51 | 33.8 |
| KRH77195 | Soybean | nucleus | 35.53 | 33.7 |
| KRH04346 | Soybean | nucleus | 35.82 | 33.69 |
| KRH47401 | Soybean | nucleus | 19.48 | 33.5 |
| CDX89512 | Canola | nucleus | 28.37 | 33.45 |
| KRH04347 | Soybean | nucleus | 32.38 | 33.14 |
| CDY13735 | Canola | nucleus | 27.22 | 32.87 |
| KRH44509 | Soybean | nucleus | 20.06 | 32.86 |
| CDY52593 | Canola | nucleus | 26.65 | 32.63 |
| KRH58187 | Soybean | endoplasmic reticulum | 31.23 | 32.44 |
| Bra039926.1-P | Field mustard | nucleus | 26.93 | 32.41 |
| KRH00980 | Soybean | nucleus | 18.62 | 32.02 |
| KRH44511 | Soybean | nucleus | 30.09 | 32.01 |
| AT2G22760.1 | Thale cress | nucleus | 26.93 | 31.86 |
| CDY25629 | Canola | nucleus | 27.22 | 31.67 |
| Bra039927.1-P | Field mustard | nucleus | 28.65 | 31.65 |
| CDY52591 | Canola | nucleus | 28.37 | 31.43 |
| KRH47399 | Soybean | nucleus | 30.66 | 31.38 |
| KRH44510 | Soybean | nucleus | 24.64 | 31.27 |
| KRH23621 | Soybean | nucleus | 26.07 | 31.27 |
| Bra030208.1-P | Field mustard | nucleus | 27.22 | 31.25 |
| KRH09685 | Soybean | cytosol | 26.36 | 31.08 |
| AT2G22770.1 | Thale cress | nucleus | 28.37 | 30.94 |
| CDY25630 | Canola | nucleus | 28.65 | 30.77 |
| KRH47400 | Soybean | nucleus | 23.5 | 30.48 |
| CDX89513 | Canola | nucleus | 28.37 | 30.46 |
| KRH66425 | Soybean | nucleus | 27.22 | 30.45 |
| Bra030207.1-P | Field mustard | nucleus | 28.37 | 30.37 |
| KRH00979 | Soybean | nucleus | 26.07 | 29.93 |
| KRH48858 | Soybean | nucleus | 27.51 | 29.81 |
| KRH00981 | Soybean | nucleus | 26.93 | 28.92 |
| KRH48860 | Soybean | nucleus | 26.07 | 28.8 |
| KRH40246 | Soybean | nucleus, vacuole | 21.49 | 27.78 |
| KRH44512 | Soybean | nucleus | 27.79 | 25.87 |
| KRH47398 | Soybean | nucleus | 26.93 | 25.41 |
| KRH66407 | Soybean | nucleus | 28.37 | 25.38 |
| KRH48847 | Soybean | nucleus | 26.93 | 24.67 |
| KRH06400 | Soybean | nucleus | 21.49 | 16.09 |
| KRH47834 | Soybean | nucleus | 20.92 | 15.73 |
| KRH75613 | Soybean | nucleus | 25.79 | 14.13 |
| KRH74418 | Soybean | nucleus | 25.5 | 13.86 |
| KRH45440 | Soybean | nucleus | 24.93 | 13.3 |
| KRH32144 | Soybean | nucleus | 19.2 | 13.29 |
| KRH19522 | Soybean | nucleus | 18.91 | 13.04 |
| KRH68922 | Soybean | nucleus | 19.48 | 12.36 |
| KRH67189 | Soybean | cytosol, mitochondrion, nucleus, plastid | 19.77 | 12.06 |
| KRH06456 | Soybean | nucleus | 20.63 | 11.65 |
| KRH39540 | Soybean | nucleus | 24.36 | 11.63 |
| KRG97199 | Soybean | nucleus | 20.34 | 11.47 |
| KRH71432 | Soybean | nucleus | 20.92 | 11.18 |
| KRH41187 | Soybean | nucleus | 20.06 | 11.11 |
| KRH47899 | Soybean | nucleus | 19.77 | 11.02 |
| KRH32008 | Soybean | extracellular, plastid | 20.92 | 10.99 |
| KRH59908 | Soybean | nucleus | 19.77 | 10.94 |
| KRG95511 | Soybean | cytosol, mitochondrion, nucleus, plastid | 18.34 | 10.88 |
| KRH05127 | Soybean | nucleus, plastid | 8.02 | 9.56 |
| KRH48144 | Soybean | nucleus | 15.19 | 8.15 |
| KRH65046 | Soybean | nucleus | 14.9 | 8.04 |
Protein Annotations
| EntrezGene:100791810 | MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | EMBL:ACUP02006743 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_11G043700 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| UniProt:I1LH23 | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH28296 | ProteinID:KRH28296 | ProteinID:KRH28296.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF100 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000233CE51 | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr11:+:3230808..3233276
Molecular Weight (calculated)
38989.9 Da
IEP (calculated)
6.289
GRAVY (calculated)
-0.430
Length
349 amino acids
Sequence
(BLAST)
(BLAST)
001: MMEIANHYYL PELGIEDPTL FDQYPMDSFA CPLDDFDFES FSGSPESNSS YQFNSESTPN CFPAESPDQS FVPARPTKRL KTFNTSNTCA SDIISHKVSA
101: SSSSQVISFD HFNAPSDASS LQFHRNLDFD VKPKIEKASS GNMDFAAFVS HGSYVDKTFL SSDTNQVGIT SRNPIQAQEH VIAERKRREK LSQRFIALSA
201: ILPGLKKMDK ASVLGDAIKY VKQLQERVQT LEEQAAKRTA GSRVLVKRSI LFADDENSDS HCEHSLPEIE VRVSGKDVLI RTQCDKHSGH AAMILSELEK
301: LHFIVQSSSF LPFGNNNTDV TIIAQMNKEN CMTAKDLLGR LRQALKQFI
101: SSSSQVISFD HFNAPSDASS LQFHRNLDFD VKPKIEKASS GNMDFAAFVS HGSYVDKTFL SSDTNQVGIT SRNPIQAQEH VIAERKRREK LSQRFIALSA
201: ILPGLKKMDK ASVLGDAIKY VKQLQERVQT LEEQAAKRTA GSRVLVKRSI LFADDENSDS HCEHSLPEIE VRVSGKDVLI RTQCDKHSGH AAMILSELEK
301: LHFIVQSSSF LPFGNNNTDV TIIAQMNKEN CMTAKDLLGR LRQALKQFI
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.