Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- mitochondrion 4
- nucleus 2
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| KRG88937 | |
| KRG89998 | |
| KRG94783 | |
| KRG96119 | |
| KRG99521 | |
| KRG99949 | |
| KRH02502 | |
| KRH03090 | |
| KRH03376 | |
| KRH04346 | |
| KRH04348 | |
| KRH06738 | |
| KRH08479 | |
| KRH10122 | |
| KRH12664 | |
| KRH16989 | |
| KRH17709 | |
| KRH19450 | |
| KRH20021 | |
| KRH22229 | |
| KRH23214 | |
| KRH24316 | |
| KRH24617 | |
| KRH25888 | |
| KRH27110 | |
| KRH28295 | |
| KRH28296 | |
| KRH29295 | |
| KRH29616 | |
| KRH32645 | |
| KRH37650 | |
| KRH41057 | |
| KRH42480 | |
| KRH49100 | |
| KRH54462 | |
| KRH54632 | |
| KRH55616 | |
| KRH56866 | |
| KRH57009 | |
| KRH58186 | |
| KRH58189 | |
| KRH59736 | |
| KRH63271 | |
| KRH63457 | |
| KRH66092 | |
| KRH67832 | |
| KRH70130 | |
| KRH72628 | |
| KRH75301 | |
| KRH77192 | |
| KRH77195 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G32230.1 | KRH10122 | AT1G06040.1 | 11018516 |
| AT1G32230.1 | KRH23214 | AT1G06040.1 | 11018516 |
| AT1G32230.1 | KRH24617 | AT1G06040.1 | 11018516 |
| AT1G32230.1 | KRH29616 | AT1G06040.1 | 11018516 |
| AT1G32230.1 | KRH10122 | AT1G06040.1 | 19548978 |
| AT1G32230.1 | KRH23214 | AT1G06040.1 | 19548978 |
| AT1G32230.1 | KRH24617 | AT1G06040.1 | 19548978 |
| AT1G32230.1 | KRH29616 | AT1G06040.1 | 19548978 |
| AT1G32230.1 | KRH03376 | AT1G74890.1 | 19548978 |
| AT1G32230.1 | KRH54462 | AT1G74890.1 | 19548978 |
| AT1G32230.1 | KRH57009 | AT1G74890.1 | 19548978 |
| AT1G32230.1 | KRH63457 | AT1G74890.1 | 19548978 |
| AT1G32230.1 | KRH42480 | AT2G01980.1 | 17023541 |
| AT1G32230.1 | KRH24316 | AT2G16770.1 | 19548978 |
| AT1G32230.1 | KRH29295 | AT2G16770.1 | 19548978 |
| AT1G32230.1 | KRH04346 | AT2G22760.1 | 19548978 |
| AT1G32230.1 | KRH04348 | AT2G22760.1 | 19548978 |
| AT1G32230.1 | KRH28295 | AT2G22760.1 | 19548978 |
| AT1G32230.1 | KRH28296 | AT2G22760.1 | 19548978 |
| AT1G32230.1 | KRH58186 | AT2G22760.1 | 19548978 |
| AT1G32230.1 | KRH58189 | AT2G22760.1 | 19548978 |
| AT1G32230.1 | KRH77192 | AT2G22760.1 | 19548978 |
| AT1G32230.1 | KRH77195 | AT2G22760.1 | 19548978 |
| AT1G32230.1 | KRH41057 | AT2G33550.1 | 19548978 |
| AT1G32230.1 | KRH59736 | AT2G33550.1 | 19548978 |
| AT1G32230.1 | KRG99521 | AT2G37630.1 | 19548978 |
| AT1G32230.1 | KRG99949 | AT2G37630.1 | 19548978 |
| AT1G32230.1 | KRH49100 | AT2G37630.1 | 19548978 |
| AT1G32230.1 | KRH66092 | AT2G37630.1 | 19548978 |
| AT1G32230.1 | KRG94783 | AT3G04060.1 | 19548978 |
| AT1G32230.1 | KRH06738 | AT3G04060.1 | 19548978 |
| AT1G32230.1 | KRH08479 | AT3G04060.1 | 19548978 |
| AT1G32230.1 | KRH70130 | AT3G04060.1 | 19548978 |
| AT1G32230.1 | KRG94783 | AT3G04060.1 | 25348421 |
| AT1G32230.1 | KRH06738 | AT3G04060.1 | 25348421 |
| AT1G32230.1 | KRH08479 | AT3G04060.1 | 25348421 |
| AT1G32230.1 | KRH70130 | AT3G04060.1 | 25348421 |
| AT1G32230.1 | KRG88937 | AT4G00050.1 | 19548978 |
| AT1G32230.1 | KRH75301 | AT4G00050.1 | 19548978 |
| AT1G32230.1 | KRH02502 | AT4G01720.1 | 19548978 |
| AT1G32230.1 | KRH12664 | AT4G01720.1 | 19548978 |
| AT1G32230.1 | KRH19450 | AT4G01720.1 | 19548978 |
| AT1G32230.1 | KRH37650 | AT4G01720.1 | 19548978 |
| AT1G32230.1 | KRG96119 | AT5G03760.1 | 19548978 |
| AT1G32230.1 | KRH20021 | AT5G03760.1 | 19548978 |
| AT1G32230.1 | KRH32645 | AT5G03760.1 | 19548978 |
| AT1G32230.1 | KRH67832 | AT5G03760.1 | 19548978 |
| AT1G32230.1 | KRG89998 | AT5G48250.1 | 19548978 |
| AT1G32230.1 | KRH16989 | AT5G48250.1 | 19548978 |
| AT1G32230.1 | KRH17709 | AT5G48250.1 | 19548978 |
| AT1G32230.1 | KRH72628 | AT5G48250.1 | 19548978 |
| AT1G32230.1 | KRH22229 | AT5G54680.1 | 19548978 |
| AT1G32230.1 | KRH25888 | AT5G54680.1 | 19548978 |
| AT1G32230.1 | KRH27110 | AT5G54680.1 | 19548978 |
| AT1G32230.1 | KRH55616 | AT5G54680.1 | 19548978 |
| AT1G32230.1 | KRH03090 | AT5G61270.1 | 19548978 |
| AT1G32230.1 | KRH54632 | AT5G61270.1 | 19548978 |
| AT1G32230.1 | KRH56866 | AT5G61270.1 | 19548978 |
| AT1G32230.1 | KRH63271 | AT5G61270.1 | 19548978 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH74370 | Soybean | mitochondrion, nucleus, plastid | 92.97 | 92.97 |
| KRH74373 | Soybean | mitochondrion | 61.41 | 75.05 |
| VIT_02s0012g01920.t01 | Wine grape | cytosol | 38.77 | 42.4 |
| VIT_02s0012g01930.t01 | Wine grape | nucleus | 42.37 | 39.65 |
| Bra017317.1-P | Field mustard | nucleus | 35.85 | 39.43 |
| CDY32124 | Canola | nucleus | 35.85 | 39.43 |
| Solyc08g005270.2.1 | Tomato | nucleus | 40.31 | 39.17 |
| CDY22597 | Canola | nucleus | 36.02 | 38.6 |
| Bra023252.1-P | Field mustard | nucleus | 31.9 | 38.59 |
| AT1G32230.1 | Thale cress | nucleus | 38.94 | 38.54 |
| CDY60257 | Canola | cytosol | 21.61 | 38.53 |
| AT2G35510.3 | Thale cress | cytosol | 37.22 | 38.2 |
| PGSC0003DMT400038368 | Potato | nucleus | 38.42 | 38.03 |
| CDY67026 | Canola | nucleus | 35.68 | 37.82 |
| Bra035511.1-P | Field mustard | cytosol | 35.68 | 37.28 |
| Bra005336.1-P | Field mustard | cytosol, nucleus, plastid | 32.93 | 36.64 |
| CDX84199 | Canola | cytosol, nucleus, plastid | 30.53 | 36.11 |
| CDY43007 | Canola | nucleus | 35.85 | 35.97 |
| CDY31694 | Canola | nucleus | 32.25 | 35.61 |
| CDY41739 | Canola | cytosol | 32.42 | 34.36 |
| GSMUA_Achr8P14660_001 | Banana | cytosol, endoplasmic reticulum, nucleus | 31.22 | 33.09 |
| GSMUA_Achr11P... | Banana | nucleus | 29.16 | 32.69 |
| PGSC0003DMT400043197 | Potato | nucleus | 32.93 | 32.32 |
| GSMUA_Achr2P18060_001 | Banana | nucleus | 31.56 | 32.0 |
| GSMUA_Achr5P14120_001 | Banana | nucleus | 30.36 | 31.27 |
| TraesCS1B01G210300.4 | Wheat | peroxisome | 31.56 | 31.24 |
| KRH42972 | Soybean | cytosol | 15.09 | 30.99 |
| TraesCS1D01G199200.1 | Wheat | cytosol, nucleus, plastid | 31.39 | 30.91 |
| HORVU1Hr1G050960.7 | Barley | nucleus | 31.9 | 30.54 |
| TraesCS1A01G195400.4 | Wheat | cytosol | 30.87 | 30.41 |
| Os10t0577800-01 | Rice | nucleus | 30.53 | 30.12 |
| GSMUA_Achr4P19000_001 | Banana | nucleus | 21.44 | 29.83 |
| TraesCS4A01G321300.1 | Wheat | nucleus | 28.82 | 29.53 |
| TraesCS5D01G551800.3 | Wheat | nucleus | 29.16 | 29.41 |
| TraesCS5B01G557500.2 | Wheat | nucleus | 28.82 | 29.07 |
| KXG38822 | Sorghum | nucleus | 29.33 | 28.74 |
| HORVU5Hr1G124010.1 | Barley | nucleus | 28.3 | 28.5 |
| Zm00001d030110_P001 | Maize | mitochondrion, nucleus | 28.82 | 28.19 |
| Os03t0854800-03 | Rice | nucleus | 27.96 | 27.91 |
| Zm00001d014423_P002 | Maize | nucleus | 29.33 | 27.9 |
| KRH03292 | Soybean | cytosol | 15.95 | 27.68 |
| KRH57070 | Soybean | cytosol | 15.09 | 26.91 |
| EER90487 | Sorghum | nucleus | 26.24 | 26.7 |
| KRH63531 | Soybean | nucleus | 14.92 | 26.36 |
| HORVU0Hr1G014460.1 | Barley | nucleus | 23.16 | 23.4 |
| Zm00001d012821_P003 | Maize | extracellular, vacuole | 25.21 | 22.41 |
Protein Annotations
| EMBL:ACUP02005943 | EnsemblPlants:KRH39574 | EnsemblPlantsGene:GLYMA_09G207200 | EntrezGene:100797549 | Gene3D:3.90.228.10 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0003950 | GO:GO:0016740 | InterPro:IPR012317 | InterPro:Poly(ADP-ribose)pol_cat_dom | InterPro:RST |
| PANTHER:PTHR32263 | PANTHER:PTHR32263:SF4 | PFAM:PF12174 | PFscan:PS51059 | ProteinID:KRH39574 | ProteinID:KRH39574.1 |
| SUPFAM:SSF56399 | UniParc:UPI0002337D1A | UniProt:K7LF35 | MapMan:35.1 | : | : |
Description
hypothetical protein
Coordinates
chr9:+:43118186..43124208
Molecular Weight (calculated)
65056.4 Da
IEP (calculated)
6.685
GRAVY (calculated)
-0.425
Length
583 amino acids
Sequence
(BLAST)
(BLAST)
001: MEAKIAKALD RVALNLKRKR ATRYAAHLSG ASQPMLGHWS SFTSPTSRAV KRMRLGGYRN RLTNAGPHIG RSLARRFLNY KKSGRLERLM FYENGSWLDF
101: PKDVVDLVKK DLEIKRAAVE IESHGYHLLF DFLRLHKMDL KTGLQQPIAL IDEAGCCFFP EIYAASDEEP YNLSKQEGGK SPDSYASNEI KLHLEVEING
201: VDQSRLSECS GESNALVKGI QIDTKENCCQ YDVEVEDSIN KKDCGNVGED IQQHQDIGLD AYTESVYGKL DLNSVQKMFL KGMCSFGSTD SDIVEIYHCS
301: GASMQARWEL FQKQAEITKK NHGEANIRYA WLASSKGELS TMMNYGLSHY GLSGSKCTYG IGVHLAAVTC PDASVRYCDV DENGVRHLAL CRVIMGNMEI
401: LRPGTDQFHP SSCEYDNGVD AIECPQYYVV WNMNMNTHIY PEFVVSFKVS SDAEGHFCGS EGKNVSGVNT ACDGPHGLLN SESSTVDNGK APSMVSSTPK
501: VPKSPWMPFP VLLDAIRDQV PPTGMDVIKT YYEQFRSKHI SRDDFVKMLR LIVGDGLLRT TITNLQYKIP SGGELKDSIK KED
101: PKDVVDLVKK DLEIKRAAVE IESHGYHLLF DFLRLHKMDL KTGLQQPIAL IDEAGCCFFP EIYAASDEEP YNLSKQEGGK SPDSYASNEI KLHLEVEING
201: VDQSRLSECS GESNALVKGI QIDTKENCCQ YDVEVEDSIN KKDCGNVGED IQQHQDIGLD AYTESVYGKL DLNSVQKMFL KGMCSFGSTD SDIVEIYHCS
301: GASMQARWEL FQKQAEITKK NHGEANIRYA WLASSKGELS TMMNYGLSHY GLSGSKCTYG IGVHLAAVTC PDASVRYCDV DENGVRHLAL CRVIMGNMEI
401: LRPGTDQFHP SSCEYDNGVD AIECPQYYVV WNMNMNTHIY PEFVVSFKVS SDAEGHFCGS EGKNVSGVNT ACDGPHGLLN SESSTVDNGK APSMVSSTPK
501: VPKSPWMPFP VLLDAIRDQV PPTGMDVIKT YYEQFRSKHI SRDDFVKMLR LIVGDGLLRT TITNLQYKIP SGGELKDSIK KED
001: MEAKIVKVLD SSRCEDGFGK KRKRAASYAA YVTGVSCAKL QNVPPPNGQC QIPDKRRRLE GENKLSAYEN RSGKALVRYY TYFKKTGIAK RVMMYENGEW
101: NDLPEHVICA IQNELEEKSA AIEFKLCGHS FILDFLHMQR LDMETGAKTP LAWIDNAGKC FFPEIYESDE RTNYCHHKCV EDPKQNAPHD IKLRLEIDVN
201: GGETPRLNLE ECSDESGDNM MDDVPLAQRS SNEHYDEATE DSCSRKLEAA VSKWDETDAI VVSGAKLTGS EVLDKDAVKK MFAVGTASLG HVPVLDVGRF
301: SSEIAEARLA LFQKQVEITK KHRGDANVRY AWLPAKREVL SAVMMQGLGV GGAFIRKSIY GVGIHLTAAD CPYFSARYCD VDENGVRYMV LCRVIMGNME
401: LLRGDKAQFF SGGEEYDNGV DDIESPKNYI VWNINMNTHI FPEFVVRFKL SNLPNAEGNL IAKRDNSGVT LEGPKDLPPQ LESNQGARGS GSANSVGSST
501: TRPKSPWMPF PTLFAAISHK VAENDMLLIN ADYQQLRDKK MTRAEFVRKL RVIVGDDLLR STITTLQNQP KSKEIPGSIR DHEEGAGGL
101: NDLPEHVICA IQNELEEKSA AIEFKLCGHS FILDFLHMQR LDMETGAKTP LAWIDNAGKC FFPEIYESDE RTNYCHHKCV EDPKQNAPHD IKLRLEIDVN
201: GGETPRLNLE ECSDESGDNM MDDVPLAQRS SNEHYDEATE DSCSRKLEAA VSKWDETDAI VVSGAKLTGS EVLDKDAVKK MFAVGTASLG HVPVLDVGRF
301: SSEIAEARLA LFQKQVEITK KHRGDANVRY AWLPAKREVL SAVMMQGLGV GGAFIRKSIY GVGIHLTAAD CPYFSARYCD VDENGVRYMV LCRVIMGNME
401: LLRGDKAQFF SGGEEYDNGV DDIESPKNYI VWNINMNTHI FPEFVVRFKL SNLPNAEGNL IAKRDNSGVT LEGPKDLPPQ LESNQGARGS GSANSVGSST
501: TRPKSPWMPF PTLFAAISHK VAENDMLLIN ADYQQLRDKK MTRAEFVRKL RVIVGDDLLR STITTLQNQP KSKEIPGSIR DHEEGAGGL
Arabidopsis Description
RCD1Poly [ADP-ribose] polymerase [Source:UniProtKB/TrEMBL;Acc:M5BF30]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.