Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 1
- plasma membrane 3
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| mitochondrion:
28499913
|
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G01980.1 | KRH39574 | AT1G32230.1 | 17023541 |
| AT2G01980.1 | KRH74370 | AT1G32230.1 | 17023541 |
| AT2G01980.1 | KRH74373 | AT1G32230.1 | 17023541 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0011g06550.t01 | Wine grape | cytosol | 69.9 | 70.03 |
| Solyc01g005020.2.1 | Tomato | plastid | 66.58 | 66.12 |
| PGSC0003DMT400058653 | Potato | plasma membrane | 66.67 | 66.09 |
| Bra026197.1-P | Field mustard | plasma membrane | 42.78 | 65.81 |
| TraesCS2D01G135600.1 | Wheat | endoplasmic reticulum | 44.27 | 65.63 |
| AT1G14660.1 | Thale cress | cytosol, golgi, plasma membrane, plastid | 43.04 | 65.08 |
| GSMUA_Achr8P16670_001 | Banana | cytosol | 64.22 | 64.22 |
| TraesCS2A01G133600.1 | Wheat | endoplasmic reticulum | 43.13 | 63.94 |
| OQU79740 | Sorghum | cytosol, golgi, plasma membrane | 62.38 | 62.71 |
| AT2G01980.1 | Thale cress | plasma membrane | 62.47 | 62.3 |
| Bra017430.1-P | Field mustard | plasma membrane | 61.85 | 62.07 |
| TraesCS3A01G023200.2 | Wheat | golgi | 61.15 | 61.21 |
| TraesCS3D01G022900.1 | Wheat | golgi | 60.89 | 60.95 |
| Os12t0641100-04 | Rice | cytosol, peroxisome, plasma membrane | 61.07 | 60.8 |
| TraesCS7B01G475500.1 | Wheat | plastid | 60.54 | 60.65 |
| TraesCS7A01G397700.1 | Wheat | golgi | 51.79 | 58.73 |
| TraesCS3B01G021600.2 | Wheat | plastid | 61.15 | 58.69 |
| TraesCS7A01G462000.1 | Wheat | plasma membrane | 49.96 | 57.62 |
| TraesCSU01G002700.1 | Wheat | plasma membrane | 53.37 | 57.49 |
| TraesCS2A01G034700.1 | Wheat | plasma membrane | 51.53 | 56.96 |
| Zm00001d031232_P009 | Maize | plastid | 59.58 | 53.5 |
| CDY04108 | Canola | cytosol, peroxisome, vacuole | 5.42 | 52.1 |
| CDY04109 | Canola | golgi, plasma membrane | 7.87 | 48.39 |
| HORVU7Hr1G085980.11 | Barley | plastid | 3.41 | 22.03 |
Protein Annotations
| EntrezGene:100789429 | Gene3D:2.60.120.10 | MapMan:24.2.8.1.2 | MapMan:26.6.1.2 | EMBL:ACUP02004805 | InterPro:Cation/H_exchanger |
| InterPro:Cation/H_exchanger_CPA1 | EnsemblPlantsGene:GLYMA_08G092000 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009536 | GO:GO:0009941 | GO:GO:0009987 | GO:GO:0015297 | GO:GO:0015299 |
| GO:GO:0015385 | GO:GO:0015386 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019538 | GO:GO:0019725 |
| GO:GO:0051453 | GO:GO:0055085 | GO:GO:0071805 | GO:GO:0098719 | GO:GO:1902600 | UniProt:H9CDQ2 |
| InterPro:IPR000595 | InterPro:IPR014710 | EMBL:JQ287499 | EnsemblPlants:KRH42480 | ProteinID:KRH42480 | ProteinID:KRH42480.1 |
| PFAM:PF00999 | PFscan:PS50042 | PANTHER:PTHR10110 | PANTHER:PTHR10110:SF86 | InterPro:RmlC-like_jellyroll | SUPFAM:SSF51206 |
| TMHMM:TMhelix | UniParc:UPI0002337CCE | InterPro:cNMP-bd-like | InterPro:cNMP-bd_dom | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr8:+:6941853..6954781
Molecular Weight (calculated)
126442.0 Da
IEP (calculated)
6.764
GRAVY (calculated)
0.089
Length
1143 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEEEQQQQHL SLSISLSVVS AASSSSEENS NPSDAVIFFG LSLALGIACR HLLRGTRVPY TVALLILGIA LGSIEYGTHH RLGKIGDGIR IWSEIDPDLL
0101: LAVFLPALLF ESSFLMEVHQ IKRCLAQMIL LAGPGVALST VCLGVVLKLT FPYNWSWKTS LLLGGLLSAT DPVAVVALLK DLGASKKLST IIEGESLMND
0201: GTAIVVYTLF YRMVLGETFN WVAIIKFLAQ VSLGAVGMGL AFGIASVLWL GFIFNDTVIE IALTFAVSYI AYFTAQEGSG VSGVLTVMSL GMFYSAFART
0301: AFKGESQQSL HHFWEMIAYI ANTLIFILSG VVIAEGILGD ENVFYHGTSW THLLLLYAYV QVSRCIVVGA LFPFLRYFGY GLDWKEAIIL IWSGLRGAVA
0401: LALSLSVKRS GGKSSELTPE TGTLFVFFTG GTVFLTLIIN GSTTQFILHY LGMDKLSAAK RRILNFTKYE MLNKALEAFG ELGDDEELGP ADWPTVKRYI
0501: SCLNDIEGEC VHPHGAPEND SNLDPMNLKD IRVRLLNGVQ AAYWEMLDEG RISQTTANIL MLSVEEAVDL ASSEPLCDWK GLKSNVHFPN YYKFLQSSMF
0601: PPKLVTYFTV ERLESACYIC AAFLRAHRIA RQQLHDFIGD SDIASAVINE SVVEGEEARK FLEDVNVTYP QVLRVVKTRQ ATYAVLNHLI EYVENLEKAG
0701: ILEEKEMLQL HDAVQTDLKK LLRNPPLVKL PKISSIHPML GALPSSVRES LASCTKEMMK LRGLTLYKEG AKSNGIWLIS NGVVKWESKM IRTKHSFNPT
0801: FTHGSTLGIY EVLTGRSYIC DVVTDSVVFC IFLEADKIRS CLKADPLTEK FLWEESAIFL SKLLLPQIFE KLGMQDLRTL IADSERSRMT IFIRGETIEI
0901: PHHSVALLLE GYVKTQGRQE LVTAPAALLP SHGNLSFQNL ASSGSKEASF IHQQGSSYLV ETTARVILFD IPAPEADAAL VRRSSSLLSH AGDHPHRSFR
1001: RKHSGLMSWP EHFYKQDHKQ RSEGAGRQTN SLSARAMQLS IYGSMVDIPP RSRSLLTNDG RPPHSLSYPT IVSHQGRPLV SVKSEGAATA KKVHEVTRHV
1101: TNPPSQSTER RQHHHGDNSS DDSGAEEEDI IVRIDSPSTL SFR
0101: LAVFLPALLF ESSFLMEVHQ IKRCLAQMIL LAGPGVALST VCLGVVLKLT FPYNWSWKTS LLLGGLLSAT DPVAVVALLK DLGASKKLST IIEGESLMND
0201: GTAIVVYTLF YRMVLGETFN WVAIIKFLAQ VSLGAVGMGL AFGIASVLWL GFIFNDTVIE IALTFAVSYI AYFTAQEGSG VSGVLTVMSL GMFYSAFART
0301: AFKGESQQSL HHFWEMIAYI ANTLIFILSG VVIAEGILGD ENVFYHGTSW THLLLLYAYV QVSRCIVVGA LFPFLRYFGY GLDWKEAIIL IWSGLRGAVA
0401: LALSLSVKRS GGKSSELTPE TGTLFVFFTG GTVFLTLIIN GSTTQFILHY LGMDKLSAAK RRILNFTKYE MLNKALEAFG ELGDDEELGP ADWPTVKRYI
0501: SCLNDIEGEC VHPHGAPEND SNLDPMNLKD IRVRLLNGVQ AAYWEMLDEG RISQTTANIL MLSVEEAVDL ASSEPLCDWK GLKSNVHFPN YYKFLQSSMF
0601: PPKLVTYFTV ERLESACYIC AAFLRAHRIA RQQLHDFIGD SDIASAVINE SVVEGEEARK FLEDVNVTYP QVLRVVKTRQ ATYAVLNHLI EYVENLEKAG
0701: ILEEKEMLQL HDAVQTDLKK LLRNPPLVKL PKISSIHPML GALPSSVRES LASCTKEMMK LRGLTLYKEG AKSNGIWLIS NGVVKWESKM IRTKHSFNPT
0801: FTHGSTLGIY EVLTGRSYIC DVVTDSVVFC IFLEADKIRS CLKADPLTEK FLWEESAIFL SKLLLPQIFE KLGMQDLRTL IADSERSRMT IFIRGETIEI
0901: PHHSVALLLE GYVKTQGRQE LVTAPAALLP SHGNLSFQNL ASSGSKEASF IHQQGSSYLV ETTARVILFD IPAPEADAAL VRRSSSLLSH AGDHPHRSFR
1001: RKHSGLMSWP EHFYKQDHKQ RSEGAGRQTN SLSARAMQLS IYGSMVDIPP RSRSLLTNDG RPPHSLSYPT IVSHQGRPLV SVKSEGAATA KKVHEVTRHV
1101: TNPPSQSTER RQHHHGDNSS DDSGAEEEDI IVRIDSPSTL SFR
0001: MTTVIDATMA YRFLEEATDS SSSSSSSKLE SSPVDAVLFV GMSLVLGIAS RHLLRGTRVP YTVALLVIGI ALGSLEYGAK HNLGKIGHGI RIWNEIDPEL
0101: LLAVFLPALL FESSFSMEVH QIKRCLGQMV LLAVPGVLIS TACLGSLVKV TFPYEWDWKT SLLLGGLLSA TDPVAVVALL KELGASKKLS TIIEGESLMN
0201: DGTAIVVFQL FLKMAMGQNS DWSSIIKFLL KVALGAVGIG LAFGIASVIW LKFIFNDTVI EITLTIAVSY FAYYTAQEWA GASGVLTVMT LGMFYAAFAR
0301: TAFKGDSQKS LHHFWEMVAY IANTLIFILS GVVIAEGILD SDKIAYQGNS WRFLFLLYVY IQLSRVVVVG VLYPLLCRFG YGLDWKESII LVWSGLRGAV
0401: ALALSLSVKQ SSGNSHISKE TGTLFLFFTG GIVFLTLIVN GSTTQFVLRL LRMDILPAPK KRILEYTKYE MLNKALRAFQ DLGDDEELGP ADWPTVESYI
0501: SSLKGSEGEL VHHPHNGSKI GSLDPKSLKD IRMRFLNGVQ ATYWEMLDEG RISEVTANIL MQSVDEALDQ VSTTLCDWRG LKPHVNFPNY YNFLHSKVVP
0601: RKLVTYFAVE RLESACYISA AFLRAHTIAR QQLYDFLGES NIGSIVINES EKEGEEAKKF LEKVRSSFPQ VLRVVKTKQV TYSVLNHLLG YIENLEKVGL
0701: LEEKEIAHLH DAVQTGLKKL LRNPPIVKLP KLSDMITSHP LSVALPPAFC EPLKHSKKEP MKLRGVTLYK EGSKPTGVWL IFDGIVKWKS KILSNNHSLH
0801: PTFSHGSTLG LYEVLTGKPY LCDLITDSMV LCFFIDSEKI LSLQSDSTID DFLWQESALV LLKLLRPQIF ESVAMQELRA LVSTESSKLT TYVTGESIEI
0901: DCNSIGLLLE GFVKPVGIKE ELISSPAALS PSNGNQSFHN SSEASGIMRV SFSQQATQYI VETRARAIIF NIGAFGADRT LHRRPSSLTP PRSSSSDQLQ
1001: RSFRKEHRGL MSWPENIYAK QQQEINKTTL SLSERAMQLS IFGSMVNVYR RSVSFGGIYN NKLQDNLLYK KLPLNPAQGL VSAKSESSIV TKKQLETRKH
1101: ACQLPLKGES STRQNTMVES SDEEDEDEGI VVRIDSPSKI VFRNDL
0101: LLAVFLPALL FESSFSMEVH QIKRCLGQMV LLAVPGVLIS TACLGSLVKV TFPYEWDWKT SLLLGGLLSA TDPVAVVALL KELGASKKLS TIIEGESLMN
0201: DGTAIVVFQL FLKMAMGQNS DWSSIIKFLL KVALGAVGIG LAFGIASVIW LKFIFNDTVI EITLTIAVSY FAYYTAQEWA GASGVLTVMT LGMFYAAFAR
0301: TAFKGDSQKS LHHFWEMVAY IANTLIFILS GVVIAEGILD SDKIAYQGNS WRFLFLLYVY IQLSRVVVVG VLYPLLCRFG YGLDWKESII LVWSGLRGAV
0401: ALALSLSVKQ SSGNSHISKE TGTLFLFFTG GIVFLTLIVN GSTTQFVLRL LRMDILPAPK KRILEYTKYE MLNKALRAFQ DLGDDEELGP ADWPTVESYI
0501: SSLKGSEGEL VHHPHNGSKI GSLDPKSLKD IRMRFLNGVQ ATYWEMLDEG RISEVTANIL MQSVDEALDQ VSTTLCDWRG LKPHVNFPNY YNFLHSKVVP
0601: RKLVTYFAVE RLESACYISA AFLRAHTIAR QQLYDFLGES NIGSIVINES EKEGEEAKKF LEKVRSSFPQ VLRVVKTKQV TYSVLNHLLG YIENLEKVGL
0701: LEEKEIAHLH DAVQTGLKKL LRNPPIVKLP KLSDMITSHP LSVALPPAFC EPLKHSKKEP MKLRGVTLYK EGSKPTGVWL IFDGIVKWKS KILSNNHSLH
0801: PTFSHGSTLG LYEVLTGKPY LCDLITDSMV LCFFIDSEKI LSLQSDSTID DFLWQESALV LLKLLRPQIF ESVAMQELRA LVSTESSKLT TYVTGESIEI
0901: DCNSIGLLLE GFVKPVGIKE ELISSPAALS PSNGNQSFHN SSEASGIMRV SFSQQATQYI VETRARAIIF NIGAFGADRT LHRRPSSLTP PRSSSSDQLQ
1001: RSFRKEHRGL MSWPENIYAK QQQEINKTTL SLSERAMQLS IFGSMVNVYR RSVSFGGIYN NKLQDNLLYK KLPLNPAQGL VSAKSESSIV TKKQLETRKH
1101: ACQLPLKGES STRQNTMVES SDEEDEDEGI VVRIDSPSKI VFRNDL
Arabidopsis Description
NHX7Sodium/hydrogen exchanger 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKW9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.