Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- plasma membrane 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| VIT_02s0012g01920.t01 | |
| VIT_02s0012g01930.t01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G01980.1 | VIT_02s0012g01920.t01 | AT1G32230.1 | 17023541 |
| AT2G01980.1 | VIT_02s0012g01930.t01 | AT1G32230.1 | 17023541 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH42480 | Soybean | mitochondrion | 70.03 | 69.9 |
| Solyc01g005020.2.1 | Tomato | plastid | 70.03 | 69.42 |
| PGSC0003DMT400058653 | Potato | plasma membrane | 70.03 | 69.3 |
| GSMUA_Achr8P16670_001 | Banana | cytosol | 68.36 | 68.24 |
| TraesCS2D01G135600.1 | Wheat | endoplasmic reticulum | 46.01 | 68.09 |
| Bra026197.1-P | Field mustard | plasma membrane | 44.26 | 67.97 |
| AT1G14660.1 | Thale cress | cytosol, golgi, plasma membrane, plastid | 44.43 | 67.06 |
| TraesCS2A01G133600.1 | Wheat | endoplasmic reticulum | 44.79 | 66.28 |
| OQU79740 | Sorghum | cytosol, golgi, plasma membrane | 64.33 | 64.56 |
| Bra017430.1-P | Field mustard | plasma membrane | 64.15 | 64.27 |
| AT2G01980.1 | Thale cress | plasma membrane | 64.42 | 64.14 |
| Os12t0641100-04 | Rice | cytosol, peroxisome, plasma membrane | 64.24 | 63.85 |
| TraesCS3A01G023200.2 | Wheat | golgi | 63.63 | 63.57 |
| TraesCS3D01G022900.1 | Wheat | golgi | 63.45 | 63.4 |
| TraesCS7B01G475500.1 | Wheat | plastid | 62.14 | 62.14 |
| TraesCS7A01G397700.1 | Wheat | golgi | 54.69 | 61.9 |
| TraesCS3B01G021600.2 | Wheat | plastid | 64.15 | 61.46 |
| TraesCS7A01G462000.1 | Wheat | plasma membrane | 52.76 | 60.75 |
| TraesCS2A01G034700.1 | Wheat | plasma membrane | 53.81 | 59.38 |
| TraesCSU01G002700.1 | Wheat | plasma membrane | 54.69 | 58.81 |
| Zm00001d031232_P009 | Maize | plastid | 62.14 | 55.7 |
| CDY04108 | Canola | cytosol, peroxisome, vacuole | 5.35 | 51.26 |
| CDY04109 | Canola | golgi, plasma membrane | 7.54 | 46.24 |
| HORVU7Hr1G085980.11 | Barley | plastid | 3.42 | 22.03 |
Protein Annotations
| EntrezGene:100243891 | wikigene:100243891 | Gene3D:2.60.120.10 | MapMan:24.2.8.1.2 | MapMan:26.6.1.2 | ProteinID:ACY03274 |
| ProteinID:ACY03274.1 | ProteinID:CBI26761 | ProteinID:CBI26761.3 | InterPro:Cation/H_exchanger | InterPro:Cation/H_exchanger_CPA1 | UniProt:D7T8E0 |
| EMBL:FN595752 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0009536 |
| GO:GO:0009941 | GO:GO:0009987 | GO:GO:0015297 | GO:GO:0015299 | GO:GO:0015385 | GO:GO:0015386 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0019725 | GO:GO:0051453 | GO:GO:0055085 | GO:GO:0071805 |
| GO:GO:0098719 | GO:GO:1902600 | EMBL:GU004542 | InterPro:IPR000595 | InterPro:IPR014710 | PFAM:PF00999 |
| PFscan:PS50042 | PANTHER:PTHR10110 | PANTHER:PTHR10110:SF86 | InterPro:RmlC-like_jellyroll | EntrezGene:SOS1 | wikigene:SOS1 |
| SUPFAM:SSF51206 | TMHMM:TMhelix | UniParc:UPI00019828E1 | ArrayExpress:VIT_01s0011g06550 | EnsemblPlantsGene:VIT_01s0011g06550 | EnsemblPlants:VIT_01s0011g06550.t01 |
| unigene:Vvi.20069 | InterPro:cNMP-bd-like | InterPro:cNMP-bd_dom | SEG:seg | : | : |
Description
No Description!
Coordinates
chr1:+:6328691..6391634
Molecular Weight (calculated)
126439.0 Da
IEP (calculated)
6.777
GRAVY (calculated)
0.116
Length
1141 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGSVLEGVFP YRALGEESSS SSSNPTDAVI FVGICLVMGI ACRQLLRGTR VPYTVALLIL GIALGSLEHG TSNKLGKIGD GIRLWANIDP NLLLAVFLPA
0101: LLFESSFSME VHQIKRCMVQ MLILAGPGVL VSTFCLGSAL KFTFPYDWSW KTSLLLGGLL SATDPVAVVA LLKELGAGKK LSTIIEGESL MNDGTAIVVY
0201: QLFYQMVLGK SFNFGAVVKF LTQVSLGAVG IGLAFGLASV LWLGFIFNDT VIEITLTLAV SYIAYFTAQE GADVSGVLAV MTLGMFYAAV AKTAFKGDGQ
0301: QSLHHFWEMV AYIANTLIFI LSGVVIAEGV LGSNDIFKNH GNSWGYLILL YVYVQVSRIV VVGVSYPFLW YFGYGLDWKE AIILIWSGLR GAVALSLSLS
0401: VKRASDSSSY LSSETGTLFV FFTGGIVFLT LIVNGSTTQF ILHLLNMDKL SEVKRRILDY TKYEMLNKAL EAFGDLGDDE ELGPADWPTV KRYIASLNDV
0501: EGGLVHPHTV YESDNNLYPT NLKDIRIRLL NGVQAAYWRM LDEGRITQTT ANLLMQSVDE ALDLVSDEPL CDWKGLKANV NFPNYYRFLQ TSICPQKLIT
0601: YFTVERLESA CYICAAFLRA HRIARRQLLD FIGDSEIAST VINESEAEGE EARKFLEDVR VTFPQVLRVV KTRQVTHSVL LHLIDYVQNL EKIGLLEEKE
0701: MFHLHDAVQT DLKKLLRNPP LVKIPRMRDM ITTHPLLGAL PSAVREPLES STKEIMKVRG VALYREGSKP SGIWLISSGV VKWASKSIRN KHSLRPTFTH
0801: GSTLGLYEVL IGKPYICDMI TDSVVLCFFV ETDKIMSMLR SDPAVEDFLW QESAIVLAKL LLPQIFEKMA MQDLRALVAE KSIMTIYISG ETIEIPHYSI
0901: GFLLDGFIKG QEELITYPAA LMPSHNLSFR SLDTSGAKVA GSSHQGSPYQ VQTRARVIIF DISAFEADRG LQRRSSSLVP HSADQPSRSL SREHGDLMSW
1001: PEHFYKLRQD NQSTEGDRWK SNSLSYKAMQ LSIFGSMVGT HQHIRSFQSS RVKPSHSLSY PRVPTTHAPP LVSVRSEGPA TARRGIDMGK LTGQNLKPPL
1101: QGTPHTKETH EVDDSSEESG VEDELLVRID SPSKLSFHQA P
0101: LLFESSFSME VHQIKRCMVQ MLILAGPGVL VSTFCLGSAL KFTFPYDWSW KTSLLLGGLL SATDPVAVVA LLKELGAGKK LSTIIEGESL MNDGTAIVVY
0201: QLFYQMVLGK SFNFGAVVKF LTQVSLGAVG IGLAFGLASV LWLGFIFNDT VIEITLTLAV SYIAYFTAQE GADVSGVLAV MTLGMFYAAV AKTAFKGDGQ
0301: QSLHHFWEMV AYIANTLIFI LSGVVIAEGV LGSNDIFKNH GNSWGYLILL YVYVQVSRIV VVGVSYPFLW YFGYGLDWKE AIILIWSGLR GAVALSLSLS
0401: VKRASDSSSY LSSETGTLFV FFTGGIVFLT LIVNGSTTQF ILHLLNMDKL SEVKRRILDY TKYEMLNKAL EAFGDLGDDE ELGPADWPTV KRYIASLNDV
0501: EGGLVHPHTV YESDNNLYPT NLKDIRIRLL NGVQAAYWRM LDEGRITQTT ANLLMQSVDE ALDLVSDEPL CDWKGLKANV NFPNYYRFLQ TSICPQKLIT
0601: YFTVERLESA CYICAAFLRA HRIARRQLLD FIGDSEIAST VINESEAEGE EARKFLEDVR VTFPQVLRVV KTRQVTHSVL LHLIDYVQNL EKIGLLEEKE
0701: MFHLHDAVQT DLKKLLRNPP LVKIPRMRDM ITTHPLLGAL PSAVREPLES STKEIMKVRG VALYREGSKP SGIWLISSGV VKWASKSIRN KHSLRPTFTH
0801: GSTLGLYEVL IGKPYICDMI TDSVVLCFFV ETDKIMSMLR SDPAVEDFLW QESAIVLAKL LLPQIFEKMA MQDLRALVAE KSIMTIYISG ETIEIPHYSI
0901: GFLLDGFIKG QEELITYPAA LMPSHNLSFR SLDTSGAKVA GSSHQGSPYQ VQTRARVIIF DISAFEADRG LQRRSSSLVP HSADQPSRSL SREHGDLMSW
1001: PEHFYKLRQD NQSTEGDRWK SNSLSYKAMQ LSIFGSMVGT HQHIRSFQSS RVKPSHSLSY PRVPTTHAPP LVSVRSEGPA TARRGIDMGK LTGQNLKPPL
1101: QGTPHTKETH EVDDSSEESG VEDELLVRID SPSKLSFHQA P
0001: MTTVIDATMA YRFLEEATDS SSSSSSSKLE SSPVDAVLFV GMSLVLGIAS RHLLRGTRVP YTVALLVIGI ALGSLEYGAK HNLGKIGHGI RIWNEIDPEL
0101: LLAVFLPALL FESSFSMEVH QIKRCLGQMV LLAVPGVLIS TACLGSLVKV TFPYEWDWKT SLLLGGLLSA TDPVAVVALL KELGASKKLS TIIEGESLMN
0201: DGTAIVVFQL FLKMAMGQNS DWSSIIKFLL KVALGAVGIG LAFGIASVIW LKFIFNDTVI EITLTIAVSY FAYYTAQEWA GASGVLTVMT LGMFYAAFAR
0301: TAFKGDSQKS LHHFWEMVAY IANTLIFILS GVVIAEGILD SDKIAYQGNS WRFLFLLYVY IQLSRVVVVG VLYPLLCRFG YGLDWKESII LVWSGLRGAV
0401: ALALSLSVKQ SSGNSHISKE TGTLFLFFTG GIVFLTLIVN GSTTQFVLRL LRMDILPAPK KRILEYTKYE MLNKALRAFQ DLGDDEELGP ADWPTVESYI
0501: SSLKGSEGEL VHHPHNGSKI GSLDPKSLKD IRMRFLNGVQ ATYWEMLDEG RISEVTANIL MQSVDEALDQ VSTTLCDWRG LKPHVNFPNY YNFLHSKVVP
0601: RKLVTYFAVE RLESACYISA AFLRAHTIAR QQLYDFLGES NIGSIVINES EKEGEEAKKF LEKVRSSFPQ VLRVVKTKQV TYSVLNHLLG YIENLEKVGL
0701: LEEKEIAHLH DAVQTGLKKL LRNPPIVKLP KLSDMITSHP LSVALPPAFC EPLKHSKKEP MKLRGVTLYK EGSKPTGVWL IFDGIVKWKS KILSNNHSLH
0801: PTFSHGSTLG LYEVLTGKPY LCDLITDSMV LCFFIDSEKI LSLQSDSTID DFLWQESALV LLKLLRPQIF ESVAMQELRA LVSTESSKLT TYVTGESIEI
0901: DCNSIGLLLE GFVKPVGIKE ELISSPAALS PSNGNQSFHN SSEASGIMRV SFSQQATQYI VETRARAIIF NIGAFGADRT LHRRPSSLTP PRSSSSDQLQ
1001: RSFRKEHRGL MSWPENIYAK QQQEINKTTL SLSERAMQLS IFGSMVNVYR RSVSFGGIYN NKLQDNLLYK KLPLNPAQGL VSAKSESSIV TKKQLETRKH
1101: ACQLPLKGES STRQNTMVES SDEEDEDEGI VVRIDSPSKI VFRNDL
0101: LLAVFLPALL FESSFSMEVH QIKRCLGQMV LLAVPGVLIS TACLGSLVKV TFPYEWDWKT SLLLGGLLSA TDPVAVVALL KELGASKKLS TIIEGESLMN
0201: DGTAIVVFQL FLKMAMGQNS DWSSIIKFLL KVALGAVGIG LAFGIASVIW LKFIFNDTVI EITLTIAVSY FAYYTAQEWA GASGVLTVMT LGMFYAAFAR
0301: TAFKGDSQKS LHHFWEMVAY IANTLIFILS GVVIAEGILD SDKIAYQGNS WRFLFLLYVY IQLSRVVVVG VLYPLLCRFG YGLDWKESII LVWSGLRGAV
0401: ALALSLSVKQ SSGNSHISKE TGTLFLFFTG GIVFLTLIVN GSTTQFVLRL LRMDILPAPK KRILEYTKYE MLNKALRAFQ DLGDDEELGP ADWPTVESYI
0501: SSLKGSEGEL VHHPHNGSKI GSLDPKSLKD IRMRFLNGVQ ATYWEMLDEG RISEVTANIL MQSVDEALDQ VSTTLCDWRG LKPHVNFPNY YNFLHSKVVP
0601: RKLVTYFAVE RLESACYISA AFLRAHTIAR QQLYDFLGES NIGSIVINES EKEGEEAKKF LEKVRSSFPQ VLRVVKTKQV TYSVLNHLLG YIENLEKVGL
0701: LEEKEIAHLH DAVQTGLKKL LRNPPIVKLP KLSDMITSHP LSVALPPAFC EPLKHSKKEP MKLRGVTLYK EGSKPTGVWL IFDGIVKWKS KILSNNHSLH
0801: PTFSHGSTLG LYEVLTGKPY LCDLITDSMV LCFFIDSEKI LSLQSDSTID DFLWQESALV LLKLLRPQIF ESVAMQELRA LVSTESSKLT TYVTGESIEI
0901: DCNSIGLLLE GFVKPVGIKE ELISSPAALS PSNGNQSFHN SSEASGIMRV SFSQQATQYI VETRARAIIF NIGAFGADRT LHRRPSSLTP PRSSSSDQLQ
1001: RSFRKEHRGL MSWPENIYAK QQQEINKTTL SLSERAMQLS IFGSMVNVYR RSVSFGGIYN NKLQDNLLYK KLPLNPAQGL VSAKSESSIV TKKQLETRKH
1101: ACQLPLKGES STRQNTMVES SDEEDEDEGI VVRIDSPSKI VFRNDL
Arabidopsis Description
NHX7Sodium/hydrogen exchanger 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKW9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.