Factsheet for Bra026197.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 2
plasma membrane 4
vacuole 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45278	Canola	plasma membrane	68.91	96.24
CDY41094	Canola	plasma membrane	94.75	94.75
CDY45279	Canola	plastid	19.78	93.04
AT1G14660.1	Thale cress	cytosol, golgi, plasma membrane, plastid	86.68	85.19
TraesCS2D01G135600.1	Wheat	endoplasmic reticulum	59.49	57.33
TraesCS2A01G133600.1	Wheat	endoplasmic reticulum	58.28	56.16
Solyc04g018090.2.1	Tomato	golgi, mitochondrion, plasma membrane, plastid	22.07	49.4
Bra017430.1-P	Field mustard	plasma membrane	72.54	47.32
VIT_01s0011g06550.t01	Wine grape	cytosol	67.97	44.26
TraesCS7A01G397700.1	Wheat	golgi	59.08	43.55
KRH42480	Soybean	mitochondrion	65.81	42.78
TraesCS7A01G462000.1	Wheat	plasma membrane	56.66	42.48
OQU79740	Sorghum	cytosol, golgi, plasma membrane	64.2	41.95
PGSC0003DMT400058653	Potato	plasma membrane	64.6	41.63
Solyc01g005020.2.1	Tomato	plastid	64.33	41.53
Os12t0641100-04	Rice	cytosol, peroxisome, plasma membrane	63.93	41.38
TraesCS7B01G475500.1	Wheat	plastid	63.39	41.28
TraesCS3A01G023200.2	Wheat	golgi	62.45	40.63
HORVU3Hr1G003150.1	Barley	vacuole	62.45	40.59
TraesCS3D01G022900.1	Wheat	golgi	62.31	40.54
GSMUA_Achr8P16670_001	Banana	cytosol	62.18	40.42
TraesCS3B01G021600.2	Wheat	plastid	63.12	39.38
TraesCS2A01G034700.1	Wheat	plasma membrane	53.3	38.3
PGSC0003DMT400027579	Potato	extracellular, nucleus, plasma membrane	7.27	38.3
TraesCSU01G002700.1	Wheat	plasma membrane	53.57	37.51
Zm00001d031232_P009	Maize	plastid	61.24	35.74
Solyc04g018100.2.1	Tomato	cytosol	27.19	28.94
HORVU7Hr1G085980.11	Barley	plastid	4.85	20.34

Protein Annotations

MapMan:24.2.8.1.2	MapMan:26.6.1.2	EnsemblPlantsGene:Bra026197	EnsemblPlants:Bra026197.1	EnsemblPlants:Bra026197.1-P	InterPro:Cation/H_exchanger
InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0006810	GO:GO:0006812	GO:GO:0008150	GO:GO:0010352	GO:GO:0015297	GO:GO:0015299
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	GO:GO:1902600	UniProt:M4EBN8	PFAM:PF00999
PANTHER:PTHR10110	PANTHER:PTHR10110:SF86	TMHMM:TMhelix	UniParc:UPI000253EF43	SEG:seg	:

Description

AT1G14660 (E=0.0) ATNHX8, NHX8 | ATNHX8; lithium:hydrogen antiporter/ sodium ion transmembrane transporter/ sodium:hydrogen antiporter

Coordinates

chrA06:-:5636960..5641295

Molecular Weight (calculated)

82435.4 Da

IEP (calculated)

6.900

GRAVY (calculated)

0.294

Length

743 amino acids

Sequence
(BLAST)

001: MTSITDAVVP YFSPEKTSLS LSYSAESGSR PVDAVIFAGV SLVLGTACRQ LFNGTRVPYT VVLLVIGIVL GSLEYGTNHS LGKMGHGIRI WNDINPDLLL
101: AVFLPPLLFE SSFSMDVHQI KRCLGQMVLL AGPGVLISTF WIGSLLKLTF PYNWDWKTSL LLGALLGATD PVAVVALLKE LGASKKMTTI IDGESLMNDG
201: VSVVVFQLFL KMVMGSTSDW SFIIKFLTQN SFGAVGIGVA LGIASVFWLR FVFNDIVVQI TVTLSVSYFA YYTAQEWAGV SGILTVMTLG MFFAAFARTA
301: FKGENHQSLH HFWEMVAYIA NTLVFILSGV IIAVGDFSSR KISYEGASWG FLFLLYLYVQ LSRCVMVGVL YPLLRRFGYG LDWKESIILT WSGLRGAVSL
401: SLALSVKQSS GNSYISSETG TRFLFFTGGI VFLTLVVNGS TTQFLLHLLR MDTLTGTKKR ILEYTKFQMM NTAFKAFENL GDDEELGSAD WHTVIGHIPS
501: LKNLQGEQVD PHDGCEAGNV DPTNIMDIRI RFLNGVQAAY WEMLDDGRIT QGTANVLMQS VDEALDLVST ESLCDWRGLK PCVHFPKYYK FLQSRIIPRK
601: FVSYLIVERL ESACYISSAF LRAHRIARQQ LHGFLGDSDI ASVVINESEV EGEEAKQFLE DVRDSFPQVL SVLKTRQVTH YVLNHLNGYI KNLEKVGLLE
701: GKEVSHLHDA VQSDLKKLLR NPPSLKLPNA HDLITTNPLL RPL

Best Arabidopsis Sequence Match ( AT1G14660.1 )
(BLAST)

001: MTSIIGAALP YKSPEKAIAS SSYSAENDSS PVDAVIFAGT SLVLGTACRY LFNGTRVPYT VVLLVIGIFL GSLEYGTKHN LGKLGHGIRI WNGINPDLLL
101: AVFLPVLLFE SSFSMDVHQI KRCMGQMVLL AGPGVLISTF CLGALIKLTF PYNWDWKTSL LLGGLLGATD PVAVVALLKE LGASKKMTTL IDGESLMNDG
201: VSVVVFQLFF KMVMGHNSDW GSIIKFLVQN SFGAVGIGLA FGIASVFWLK FIFNDTVAQI TVTLSASYFA YYTAQEWAGV SGILTVMILG MFFAAFARTA
301: FKGDSHQSLH HFWEMAAYIA NTLVFMLSGV IIAESVLSGQ TISYKGNSWS FLFLLYLYVQ LSRCVVVGVL YPLLCRSGYG LDWKESIILT WSGLRGAVSL
401: SLALSVKQSS GNSYLSSDTG TRFLFLTGGI VFLTLVVNGS TTQLLLHLLR MDTLTATKKR ILEYTKFEMM KTALKAFENL GDDEELGSAD WPTVIRHISS
501: LKDLEGRQVN PHDGYEAGSL DPTNIMDIRI RFLNGVQAAY WEMLDDGRIT QCTANVLMQS VDEALDLVST SSLSDWRGLE PRVHFPNYYK FLQSKIIPHK
601: LVTHLIVERL ESACYISSAF LRAHRIARQQ LHIFLGNSNI ASTVINESEV EGEEAKQFLE DVRDSFPQVL SVLKTRQVTH YVLNHLNGYI KNLEKVGLLE
701: GKEVSHLHDV VQSDLKKLLR HPPSLKLPNV DDLITSNPLL KDRSSFRSLA IGETDA

Arabidopsis Description

NHX8Sodium/hydrogen exchanger 8 [Source:UniProtKB/Swiss-Prot;Acc:Q3YL57]
SUBAcon: [plasma membrane,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.