Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- golgi 4
- extracellular 3
- plasma membrane 5
- endoplasmic reticulum 3
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026197.1-P | Field mustard | plasma membrane | 96.24 | 68.91 |
| CDY41094 | Canola | plasma membrane | 93.98 | 67.29 |
| AT1G14660.1 | Thale cress | cytosol, golgi, plasma membrane, plastid | 85.15 | 59.92 |
| CDY04109 | Canola | golgi, plasma membrane | 15.98 | 45.7 |
| CDY56296 | Canola | plasma membrane | 71.43 | 33.36 |
| CDY04110 | Canola | plasma membrane | 71.24 | 33.27 |
| CDY04108 | Canola | cytosol, peroxisome, vacuole | 1.5 | 6.72 |
| CDY45279 | Canola | plastid | 0.75 | 2.53 |
Protein Annotations
| MapMan:24.2.8.1.2 | MapMan:26.6.1.2 | GO:A0A078I7Y9 | UniProt:A0A078I7Y9 | EnsemblPlants:CDY45278 | ProteinID:CDY45278 |
| ProteinID:CDY45278.1 | InterPro:Cation/H_exchanger | InterPro:Cation/H_exchanger_CPA1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0015297 | GO:GO:0015299 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | GO:GO:1902600 | EnsemblPlantsGene:GSBRNA2T00081720001 | PFAM:PF00999 | PANTHER:PTHR10110 |
| PANTHER:PTHR10110:SF86 | TMHMM:TMhelix | UniParc:UPI0004EF1B75 | SEG:seg | : | : |
Description
BnaA06g09480DBnaA06g09480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I7Y9]
Coordinates
chrLK032619:-:99196..102480
Molecular Weight (calculated)
59907.1 Da
IEP (calculated)
7.654
GRAVY (calculated)
0.264
Length
532 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDGVSVVVF QLFLKMVMGS TSDWSFIIKF LTQNSFGAVG IGVAFGIASV FWLRFVFNDI VVQITVTLSV SYFAYYTAQE WAGVSGILTV MTLGMFFAAF
101: ARTAFKGENH QSLHHFWEMV AFIANTLVFI LSGVIIAVGD FSSRKITYEG ASWGFLFLLY LYVQLSRCVM VGVLYPLLRR FGYGLDWKES IILTWSGLRG
201: AVSLSLALSV KFLFFTGGIV FLTLVVNGST TQFLLHLLRM DTLTGTKKRI LEYTKFEMMN TAFKAFENLG NDEELGSADW HTVIAHIPSL KNLQGEQVDP
301: HDGCEAGNVD PTNIMDIRIR FLNGVQAAYW EMLDDGRITQ GTANVLMQSV DEALDLVSTE SLCDWRSLKP CVRFPKYYKF LQSRIIPRKL VSYLIVERLE
401: SACYISSAFL RAHRIARQQL RGFLGNSDIA SVVIIESEVE GEEAKQFLEE VRDSFPQVLS VLKTRQVAHY VLNHLNGYIK NLEKVGLLQG KEVSHLHDSV
501: QSDLKKLLRN PPLLKLPNAN DLITTNPLLR PL
101: ARTAFKGENH QSLHHFWEMV AFIANTLVFI LSGVIIAVGD FSSRKITYEG ASWGFLFLLY LYVQLSRCVM VGVLYPLLRR FGYGLDWKES IILTWSGLRG
201: AVSLSLALSV KFLFFTGGIV FLTLVVNGST TQFLLHLLRM DTLTGTKKRI LEYTKFEMMN TAFKAFENLG NDEELGSADW HTVIAHIPSL KNLQGEQVDP
301: HDGCEAGNVD PTNIMDIRIR FLNGVQAAYW EMLDDGRITQ GTANVLMQSV DEALDLVSTE SLCDWRSLKP CVRFPKYYKF LQSRIIPRKL VSYLIVERLE
401: SACYISSAFL RAHRIARQQL RGFLGNSDIA SVVIIESEVE GEEAKQFLEE VRDSFPQVLS VLKTRQVAHY VLNHLNGYIK NLEKVGLLQG KEVSHLHDSV
501: QSDLKKLLRN PPLLKLPNAN DLITTNPLLR PL
001: MTSIIGAALP YKSPEKAIAS SSYSAENDSS PVDAVIFAGT SLVLGTACRY LFNGTRVPYT VVLLVIGIFL GSLEYGTKHN LGKLGHGIRI WNGINPDLLL
101: AVFLPVLLFE SSFSMDVHQI KRCMGQMVLL AGPGVLISTF CLGALIKLTF PYNWDWKTSL LLGGLLGATD PVAVVALLKE LGASKKMTTL IDGESLMNDG
201: VSVVVFQLFF KMVMGHNSDW GSIIKFLVQN SFGAVGIGLA FGIASVFWLK FIFNDTVAQI TVTLSASYFA YYTAQEWAGV SGILTVMILG MFFAAFARTA
301: FKGDSHQSLH HFWEMAAYIA NTLVFMLSGV IIAESVLSGQ TISYKGNSWS FLFLLYLYVQ LSRCVVVGVL YPLLCRSGYG LDWKESIILT WSGLRGAVSL
401: SLALSVKQSS GNSYLSSDTG TRFLFLTGGI VFLTLVVNGS TTQLLLHLLR MDTLTATKKR ILEYTKFEMM KTALKAFENL GDDEELGSAD WPTVIRHISS
501: LKDLEGRQVN PHDGYEAGSL DPTNIMDIRI RFLNGVQAAY WEMLDDGRIT QCTANVLMQS VDEALDLVST SSLSDWRGLE PRVHFPNYYK FLQSKIIPHK
601: LVTHLIVERL ESACYISSAF LRAHRIARQQ LHIFLGNSNI ASTVINESEV EGEEAKQFLE DVRDSFPQVL SVLKTRQVTH YVLNHLNGYI KNLEKVGLLE
701: GKEVSHLHDV VQSDLKKLLR HPPSLKLPNV DDLITSNPLL KDRSSFRSLA IGETDA
101: AVFLPVLLFE SSFSMDVHQI KRCMGQMVLL AGPGVLISTF CLGALIKLTF PYNWDWKTSL LLGGLLGATD PVAVVALLKE LGASKKMTTL IDGESLMNDG
201: VSVVVFQLFF KMVMGHNSDW GSIIKFLVQN SFGAVGIGLA FGIASVFWLK FIFNDTVAQI TVTLSASYFA YYTAQEWAGV SGILTVMILG MFFAAFARTA
301: FKGDSHQSLH HFWEMAAYIA NTLVFMLSGV IIAESVLSGQ TISYKGNSWS FLFLLYLYVQ LSRCVVVGVL YPLLCRSGYG LDWKESIILT WSGLRGAVSL
401: SLALSVKQSS GNSYLSSDTG TRFLFLTGGI VFLTLVVNGS TTQLLLHLLR MDTLTATKKR ILEYTKFEMM KTALKAFENL GDDEELGSAD WPTVIRHISS
501: LKDLEGRQVN PHDGYEAGSL DPTNIMDIRI RFLNGVQAAY WEMLDDGRIT QCTANVLMQS VDEALDLVST SSLSDWRGLE PRVHFPNYYK FLQSKIIPHK
601: LVTHLIVERL ESACYISSAF LRAHRIARQQ LHIFLGNSNI ASTVINESEV EGEEAKQFLE DVRDSFPQVL SVLKTRQVTH YVLNHLNGYI KNLEKVGLLE
701: GKEVSHLHDV VQSDLKKLLR HPPSLKLPNV DDLITSNPLL KDRSSFRSLA IGETDA
Arabidopsis Description
NHX8Sodium/hydrogen exchanger 8 [Source:UniProtKB/Swiss-Prot;Acc:Q3YL57]
SUBAcon: [cytosol,plasma membrane,golgi,plastid]
SUBAcon: [cytosol,plasma membrane,golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.