Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G01980.1 | CDY22597 | AT1G32230.1 | 17023541 |
| AT2G01980.1 | CDY41739 | AT1G32230.1 | 17023541 |
| AT2G01980.1 | CDY43007 | AT1G32230.1 | 17023541 |
| AT2G01980.1 | CDY60257 | AT1G32230.1 | 17023541 |
| AT2G01980.1 | CDY67026 | AT1G32230.1 | 17023541 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY04110 | Canola | plasma membrane | 98.77 | 98.77 |
| AT2G01980.1 | Thale cress | plasma membrane | 82.62 | 82.11 |
| CDY04108 | Canola | cytosol, peroxisome, vacuole | 8.43 | 80.67 |
| CDY41094 | Canola | plasma membrane | 47.23 | 72.41 |
| CDY45278 | Canola | plasma membrane | 33.36 | 71.43 |
| CDY45279 | Canola | plastid | 9.75 | 70.25 |
| CDY04109 | Canola | golgi, plasma membrane | 9.39 | 57.53 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:24.2.8.1.2 | MapMan:26.6.1.2 | unigene:Bna.18134 | EnsemblPlants:CDY56296 | ProteinID:CDY56296 |
| ProteinID:CDY56296.1 | InterPro:Cation/H_exchanger | InterPro:Cation/H_exchanger_CPA1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0015297 | GO:GO:0015299 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | GO:GO:1902600 | EnsemblPlantsGene:GSBRNA2T00019408001 | InterPro:IPR014710 | PFAM:PF00999 |
| PANTHER:PTHR10110 | PANTHER:PTHR10110:SF86 | InterPro:RmlC-like_jellyroll | SUPFAM:SSF51206 | TMHMM:TMhelix | UniParc:UPI0003D93180 |
| GO:V9LYG0 | UniProt:V9LYG0 | InterPro:cNMP-bd-like | SEG:seg | : | : |
Description
BnaC09g52290DBnaC09g52290D protein [Source:UniProtKB/TrEMBL;Acc:V9LYG0]
Coordinates
chrLK033476:-:3030..9107
Molecular Weight (calculated)
125803.0 Da
IEP (calculated)
7.017
GRAVY (calculated)
0.109
Length
1139 amino acids
Sequence
(BLAST)
(BLAST)
0001: MATVIDAAMP YRLLEEAAGS SSEGESSPVD AVLFVGMSLV LGIASRHLLR GTRVPYTVAL LVIGIALGSL EYGTHHNLGK LGHGIRIWNE INPELLLAVF
0101: LPALLFESAF SMEVHQIKRC IGQMVLLAGP GVLISTFCLA SLVKLTFPYS WDWKTALLLG GLLSATDPVA VVALLKELGA SKKLSTVIEG ESLMNDGTAI
0201: VVFQLFLKMV MGNTSDWGSI ITFLIRVALG AVGIGLAFGI VSVLWLKFIF NDTVIEITLT IAVSYFAYYT AQEWAGASGV LTVMTLGMFY AAFARTAFKG
0301: DSQKSLHHFW EMVAYIANTL IFILSGVVIA EGILDSDKIA YQGNSWGFLF LLYFYVQVSR CIVVGVLYPL LCRVGYGLDW KEGIILVWSG LRGAVALSLS
0401: LSVKQSSGNS FLSRETGTLF IFFTGGIVFL TLIVNGSTTQ FALRLLRMDG LPATKLRILD YTKYEMLNKA LQAFEDLGDD EELGPADWPT VEKYISSLKD
0501: SEGEQVHPHS GSKTGNLDST SLKDIRIRFL NGVQAAYWEM LDEGRISEST ANILMRSVDE ALDRVSTESL CDWRGLKEHV KFPGYYNFLH SKLIPGKLVI
0601: YFAVERLESA CYISAAFLRA HTIARQQLYD FIGESSIGST VIKESETEGA EAKEFLEKVR SSLPQVLRVV KTKQVTYSVL NHLLEYIQNL EKIGLLEEKE
0701: IAHLHDAVQT GLKKLLRNPP IVKLPKLSDL ISSHPLSGAL PAAICEPLKH SKKETMKLRG VTLYKEGSKP TGVWLICDGI VKWKCKSLGN NHSLHPTFSH
0801: GSTLGLYEVL TGKPYMCDMV TDSVVLCFFI SSDRILAFVH SDSTIEDFLW KESALVLLKL LRPQIFEKVA MHELRALVSA ESSKLTTYVS GESIDIDYNS
0901: VGLLLEGFIK PVGIQEELVP SPAALLPYNE NQSFRNASEA SGIMRVSFSR QATQYSVETR ARVISFNTGA FGAHRTLQRK PSSLSSQIGT SSEHQLQRSS
1001: SKEHRGLMSW PESIYKTEQQ EEINRKALNL SEQARQLSIF GSKVNLFTRS ASFGGIINNK PQDNVLYKKH PLDAAKSESS MATREQVETR KFVSQLPAHV
1101: ASGESSTRRK PMAESSDDEE EGIIVRIDSP STIVFRNDM
0101: LPALLFESAF SMEVHQIKRC IGQMVLLAGP GVLISTFCLA SLVKLTFPYS WDWKTALLLG GLLSATDPVA VVALLKELGA SKKLSTVIEG ESLMNDGTAI
0201: VVFQLFLKMV MGNTSDWGSI ITFLIRVALG AVGIGLAFGI VSVLWLKFIF NDTVIEITLT IAVSYFAYYT AQEWAGASGV LTVMTLGMFY AAFARTAFKG
0301: DSQKSLHHFW EMVAYIANTL IFILSGVVIA EGILDSDKIA YQGNSWGFLF LLYFYVQVSR CIVVGVLYPL LCRVGYGLDW KEGIILVWSG LRGAVALSLS
0401: LSVKQSSGNS FLSRETGTLF IFFTGGIVFL TLIVNGSTTQ FALRLLRMDG LPATKLRILD YTKYEMLNKA LQAFEDLGDD EELGPADWPT VEKYISSLKD
0501: SEGEQVHPHS GSKTGNLDST SLKDIRIRFL NGVQAAYWEM LDEGRISEST ANILMRSVDE ALDRVSTESL CDWRGLKEHV KFPGYYNFLH SKLIPGKLVI
0601: YFAVERLESA CYISAAFLRA HTIARQQLYD FIGESSIGST VIKESETEGA EAKEFLEKVR SSLPQVLRVV KTKQVTYSVL NHLLEYIQNL EKIGLLEEKE
0701: IAHLHDAVQT GLKKLLRNPP IVKLPKLSDL ISSHPLSGAL PAAICEPLKH SKKETMKLRG VTLYKEGSKP TGVWLICDGI VKWKCKSLGN NHSLHPTFSH
0801: GSTLGLYEVL TGKPYMCDMV TDSVVLCFFI SSDRILAFVH SDSTIEDFLW KESALVLLKL LRPQIFEKVA MHELRALVSA ESSKLTTYVS GESIDIDYNS
0901: VGLLLEGFIK PVGIQEELVP SPAALLPYNE NQSFRNASEA SGIMRVSFSR QATQYSVETR ARVISFNTGA FGAHRTLQRK PSSLSSQIGT SSEHQLQRSS
1001: SKEHRGLMSW PESIYKTEQQ EEINRKALNL SEQARQLSIF GSKVNLFTRS ASFGGIINNK PQDNVLYKKH PLDAAKSESS MATREQVETR KFVSQLPAHV
1101: ASGESSTRRK PMAESSDDEE EGIIVRIDSP STIVFRNDM
0001: MTTVIDATMA YRFLEEATDS SSSSSSSKLE SSPVDAVLFV GMSLVLGIAS RHLLRGTRVP YTVALLVIGI ALGSLEYGAK HNLGKIGHGI RIWNEIDPEL
0101: LLAVFLPALL FESSFSMEVH QIKRCLGQMV LLAVPGVLIS TACLGSLVKV TFPYEWDWKT SLLLGGLLSA TDPVAVVALL KELGASKKLS TIIEGESLMN
0201: DGTAIVVFQL FLKMAMGQNS DWSSIIKFLL KVALGAVGIG LAFGIASVIW LKFIFNDTVI EITLTIAVSY FAYYTAQEWA GASGVLTVMT LGMFYAAFAR
0301: TAFKGDSQKS LHHFWEMVAY IANTLIFILS GVVIAEGILD SDKIAYQGNS WRFLFLLYVY IQLSRVVVVG VLYPLLCRFG YGLDWKESII LVWSGLRGAV
0401: ALALSLSVKQ SSGNSHISKE TGTLFLFFTG GIVFLTLIVN GSTTQFVLRL LRMDILPAPK KRILEYTKYE MLNKALRAFQ DLGDDEELGP ADWPTVESYI
0501: SSLKGSEGEL VHHPHNGSKI GSLDPKSLKD IRMRFLNGVQ ATYWEMLDEG RISEVTANIL MQSVDEALDQ VSTTLCDWRG LKPHVNFPNY YNFLHSKVVP
0601: RKLVTYFAVE RLESACYISA AFLRAHTIAR QQLYDFLGES NIGSIVINES EKEGEEAKKF LEKVRSSFPQ VLRVVKTKQV TYSVLNHLLG YIENLEKVGL
0701: LEEKEIAHLH DAVQTGLKKL LRNPPIVKLP KLSDMITSHP LSVALPPAFC EPLKHSKKEP MKLRGVTLYK EGSKPTGVWL IFDGIVKWKS KILSNNHSLH
0801: PTFSHGSTLG LYEVLTGKPY LCDLITDSMV LCFFIDSEKI LSLQSDSTID DFLWQESALV LLKLLRPQIF ESVAMQELRA LVSTESSKLT TYVTGESIEI
0901: DCNSIGLLLE GFVKPVGIKE ELISSPAALS PSNGNQSFHN SSEASGIMRV SFSQQATQYI VETRARAIIF NIGAFGADRT LHRRPSSLTP PRSSSSDQLQ
1001: RSFRKEHRGL MSWPENIYAK QQQEINKTTL SLSERAMQLS IFGSMVNVYR RSVSFGGIYN NKLQDNLLYK KLPLNPAQGL VSAKSESSIV TKKQLETRKH
1101: ACQLPLKGES STRQNTMVES SDEEDEDEGI VVRIDSPSKI VFRNDL
0101: LLAVFLPALL FESSFSMEVH QIKRCLGQMV LLAVPGVLIS TACLGSLVKV TFPYEWDWKT SLLLGGLLSA TDPVAVVALL KELGASKKLS TIIEGESLMN
0201: DGTAIVVFQL FLKMAMGQNS DWSSIIKFLL KVALGAVGIG LAFGIASVIW LKFIFNDTVI EITLTIAVSY FAYYTAQEWA GASGVLTVMT LGMFYAAFAR
0301: TAFKGDSQKS LHHFWEMVAY IANTLIFILS GVVIAEGILD SDKIAYQGNS WRFLFLLYVY IQLSRVVVVG VLYPLLCRFG YGLDWKESII LVWSGLRGAV
0401: ALALSLSVKQ SSGNSHISKE TGTLFLFFTG GIVFLTLIVN GSTTQFVLRL LRMDILPAPK KRILEYTKYE MLNKALRAFQ DLGDDEELGP ADWPTVESYI
0501: SSLKGSEGEL VHHPHNGSKI GSLDPKSLKD IRMRFLNGVQ ATYWEMLDEG RISEVTANIL MQSVDEALDQ VSTTLCDWRG LKPHVNFPNY YNFLHSKVVP
0601: RKLVTYFAVE RLESACYISA AFLRAHTIAR QQLYDFLGES NIGSIVINES EKEGEEAKKF LEKVRSSFPQ VLRVVKTKQV TYSVLNHLLG YIENLEKVGL
0701: LEEKEIAHLH DAVQTGLKKL LRNPPIVKLP KLSDMITSHP LSVALPPAFC EPLKHSKKEP MKLRGVTLYK EGSKPTGVWL IFDGIVKWKS KILSNNHSLH
0801: PTFSHGSTLG LYEVLTGKPY LCDLITDSMV LCFFIDSEKI LSLQSDSTID DFLWQESALV LLKLLRPQIF ESVAMQELRA LVSTESSKLT TYVTGESIEI
0901: DCNSIGLLLE GFVKPVGIKE ELISSPAALS PSNGNQSFHN SSEASGIMRV SFSQQATQYI VETRARAIIF NIGAFGADRT LHRRPSSLTP PRSSSSDQLQ
1001: RSFRKEHRGL MSWPENIYAK QQQEINKTTL SLSERAMQLS IFGSMVNVYR RSVSFGGIYN NKLQDNLLYK KLPLNPAQGL VSAKSESSIV TKKQLETRKH
1101: ACQLPLKGES STRQNTMVES SDEEDEDEGI VVRIDSPSKI VFRNDL
Arabidopsis Description
NHX7Sodium/hydrogen exchanger 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKW9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.