Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 1
- mitochondrion 1
- plasma membrane 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026197.1-P | Field mustard | plasma membrane | 94.75 | 94.75 |
| CDY45278 | Canola | plasma membrane | 67.29 | 93.98 |
| CDY45279 | Canola | plastid | 19.38 | 91.14 |
| AT1G14660.1 | Thale cress | cytosol, golgi, plasma membrane, plastid | 85.73 | 84.26 |
| CDY04108 | Canola | cytosol, peroxisome, vacuole | 8.61 | 53.78 |
| CDY04109 | Canola | golgi, plasma membrane | 11.84 | 47.31 |
| CDY56296 | Canola | plasma membrane | 72.41 | 47.23 |
| CDY04110 | Canola | plasma membrane | 72.14 | 47.06 |
Protein Annotations
| MapMan:24.2.8.1.2 | MapMan:26.6.1.2 | GO:A0A078HUR9 | UniProt:A0A078HUR9 | EnsemblPlants:CDY41094 | ProteinID:CDY41094 |
| ProteinID:CDY41094.1 | InterPro:Cation/H_exchanger | InterPro:Cation/H_exchanger_CPA1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0015297 | GO:GO:0015299 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | GO:GO:1902600 | EnsemblPlantsGene:GSBRNA2T00072424001 | PFAM:PF00999 | PANTHER:PTHR10110 |
| PANTHER:PTHR10110:SF86 | TMHMM:TMhelix | UniParc:UPI0004EEC0F2 | SEG:seg | : | : |
Description
BnaC05g10850DBnaC05g10850D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HUR9]
Coordinates
chrLK032490:-:64915..70147
Molecular Weight (calculated)
82548.8 Da
IEP (calculated)
7.414
GRAVY (calculated)
0.303
Length
743 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSITEAALP YMSPEKTSLS LSYSAESDSR PVDAVIFAGV SLVLGTACRQ LFNGTRVPYS VVLLVIGIVL GSLEYGTNHN LGKIGHGIRI WNDINPDLLL
101: AVFLPALLFE SSFSMDVHQI KRCLGQMVLL AGPGVLISTF WIGSLLKLTF PYNWDWKTSL LLGALLGATD PVAVVALLKE LGASKKMTTI IDGESLMNDG
201: VSVVIFQLFL KMVMGSTSDW GFIIKFLAQN LFGAVGIGVA FGITSVFWLR FVFNDIVVQI TVTLSVSYFA YYTAQEWAGV TGILTVMTLG MFFAAFARTA
301: FKGDSYQSLH HFWEMVAYIA NTLVFILSGV IIAVGDFSSR KITYEGASWG FLFLLYLYVQ LSRCAMVGIL YPLLRRFGYG LDWKESIILT WSGLRGAVSL
401: SLALSVKQSS GNSYISSETG TRFLFFTGGI VFLTLVVNGS TTQFLLHLLR MNTLTGTKKR ILEYTKFEMM NTAFKAFENL GDDEELGSAD WHTVLGHIPS
501: LKKLQGEQVN PHDGCEAGNV DPRNIMDIRI RFLNGVQAAY WEMLDDGRIT QGTANVLMQS VDEALDLVST ESLCDWRGLK PCVRFPKYYK FLQSRIIPRK
601: LVSYLIVERL ESACYISSAF LRAHRIARQQ LHGFLGNSDI ASFVINESEV EGEEAKQFLE DVRDSFPQVL NALKTRQVTH YVLNHLNGYI KNLEKVGLLQ
701: GKEVSHLHDA VLSDLKKLLR NPPLLTLPNA NDLITTNPLL RPL
101: AVFLPALLFE SSFSMDVHQI KRCLGQMVLL AGPGVLISTF WIGSLLKLTF PYNWDWKTSL LLGALLGATD PVAVVALLKE LGASKKMTTI IDGESLMNDG
201: VSVVIFQLFL KMVMGSTSDW GFIIKFLAQN LFGAVGIGVA FGITSVFWLR FVFNDIVVQI TVTLSVSYFA YYTAQEWAGV TGILTVMTLG MFFAAFARTA
301: FKGDSYQSLH HFWEMVAYIA NTLVFILSGV IIAVGDFSSR KITYEGASWG FLFLLYLYVQ LSRCAMVGIL YPLLRRFGYG LDWKESIILT WSGLRGAVSL
401: SLALSVKQSS GNSYISSETG TRFLFFTGGI VFLTLVVNGS TTQFLLHLLR MNTLTGTKKR ILEYTKFEMM NTAFKAFENL GDDEELGSAD WHTVLGHIPS
501: LKKLQGEQVN PHDGCEAGNV DPRNIMDIRI RFLNGVQAAY WEMLDDGRIT QGTANVLMQS VDEALDLVST ESLCDWRGLK PCVRFPKYYK FLQSRIIPRK
601: LVSYLIVERL ESACYISSAF LRAHRIARQQ LHGFLGNSDI ASFVINESEV EGEEAKQFLE DVRDSFPQVL NALKTRQVTH YVLNHLNGYI KNLEKVGLLQ
701: GKEVSHLHDA VLSDLKKLLR NPPLLTLPNA NDLITTNPLL RPL
001: MTSIIGAALP YKSPEKAIAS SSYSAENDSS PVDAVIFAGT SLVLGTACRY LFNGTRVPYT VVLLVIGIFL GSLEYGTKHN LGKLGHGIRI WNGINPDLLL
101: AVFLPVLLFE SSFSMDVHQI KRCMGQMVLL AGPGVLISTF CLGALIKLTF PYNWDWKTSL LLGGLLGATD PVAVVALLKE LGASKKMTTL IDGESLMNDG
201: VSVVVFQLFF KMVMGHNSDW GSIIKFLVQN SFGAVGIGLA FGIASVFWLK FIFNDTVAQI TVTLSASYFA YYTAQEWAGV SGILTVMILG MFFAAFARTA
301: FKGDSHQSLH HFWEMAAYIA NTLVFMLSGV IIAESVLSGQ TISYKGNSWS FLFLLYLYVQ LSRCVVVGVL YPLLCRSGYG LDWKESIILT WSGLRGAVSL
401: SLALSVKQSS GNSYLSSDTG TRFLFLTGGI VFLTLVVNGS TTQLLLHLLR MDTLTATKKR ILEYTKFEMM KTALKAFENL GDDEELGSAD WPTVIRHISS
501: LKDLEGRQVN PHDGYEAGSL DPTNIMDIRI RFLNGVQAAY WEMLDDGRIT QCTANVLMQS VDEALDLVST SSLSDWRGLE PRVHFPNYYK FLQSKIIPHK
601: LVTHLIVERL ESACYISSAF LRAHRIARQQ LHIFLGNSNI ASTVINESEV EGEEAKQFLE DVRDSFPQVL SVLKTRQVTH YVLNHLNGYI KNLEKVGLLE
701: GKEVSHLHDV VQSDLKKLLR HPPSLKLPNV DDLITSNPLL KDRSSFRSLA IGETDA
101: AVFLPVLLFE SSFSMDVHQI KRCMGQMVLL AGPGVLISTF CLGALIKLTF PYNWDWKTSL LLGGLLGATD PVAVVALLKE LGASKKMTTL IDGESLMNDG
201: VSVVVFQLFF KMVMGHNSDW GSIIKFLVQN SFGAVGIGLA FGIASVFWLK FIFNDTVAQI TVTLSASYFA YYTAQEWAGV SGILTVMILG MFFAAFARTA
301: FKGDSHQSLH HFWEMAAYIA NTLVFMLSGV IIAESVLSGQ TISYKGNSWS FLFLLYLYVQ LSRCVVVGVL YPLLCRSGYG LDWKESIILT WSGLRGAVSL
401: SLALSVKQSS GNSYLSSDTG TRFLFLTGGI VFLTLVVNGS TTQLLLHLLR MDTLTATKKR ILEYTKFEMM KTALKAFENL GDDEELGSAD WPTVIRHISS
501: LKDLEGRQVN PHDGYEAGSL DPTNIMDIRI RFLNGVQAAY WEMLDDGRIT QCTANVLMQS VDEALDLVST SSLSDWRGLE PRVHFPNYYK FLQSKIIPHK
601: LVTHLIVERL ESACYISSAF LRAHRIARQQ LHIFLGNSNI ASTVINESEV EGEEAKQFLE DVRDSFPQVL SVLKTRQVTH YVLNHLNGYI KNLEKVGLLE
701: GKEVSHLHDV VQSDLKKLLR HPPSLKLPNV DDLITSNPLL KDRSSFRSLA IGETDA
Arabidopsis Description
NHX8Sodium/hydrogen exchanger 8 [Source:UniProtKB/Swiss-Prot;Acc:Q3YL57]
SUBAcon: [plasma membrane,golgi,plastid,cytosol]
SUBAcon: [plasma membrane,golgi,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.