CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plasma membrane, plastid
BaCelLo:	plastid
ChloroP:	plastid
MultiLoc:	plasma membrane
PProwler:	plastid
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04108	Canola	cytosol, peroxisome, vacuole	36.71	48.74
Bra026197.1-P	Field mustard	plasma membrane	93.04	19.78
CDY41094	Canola	plasma membrane	91.14	19.38
AT1G14660.1	Thale cress	cytosol, golgi, plasma membrane, plastid	82.28	17.2
CDY04110	Canola	plasma membrane	70.89	9.83
CDY56296	Canola	plasma membrane	70.25	9.75
CDY45278	Canola	plasma membrane	2.53	0.75
CDY04109	Canola	golgi, plasma membrane	0.63	0.54

Protein Annotations

MapMan:35.1	GO:A0A078I796	UniProt:A0A078I796	EnsemblPlants:CDY45279	ProteinID:CDY45279	ProteinID:CDY45279.1
InterPro:Cation/H_exchanger	InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006812	GO:GO:0008150	GO:GO:0015297	GO:GO:0015299	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	GO:GO:1902600	EnsemblPlantsGene:GSBRNA2T00081721001	PFAM:PF00999	PANTHER:PTHR10110	PANTHER:PTHR10110:SF86
TMHMM:TMhelix	UniParc:UPI0004EE4F14	SEG:seg	:	:	:

Description

BnaA06g09490DBnaA06g09490D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I796]

Coordinates

chrLK032619:-:102549..103541

Molecular Weight (calculated)

16893.9 Da

IEP (calculated)

8.080

GRAVY (calculated)

0.696

Length

158 amino acids

Sequence
(BLAST)

001: MTSITDAALP YFSPEKTSLS LSYSAESGSR PVDAVIFAGV SLVLGTACRQ LFNGTRVPYT VVLLVIGIVL GSLEYGTNHN LGKMGHGIRI WNDINPGLLL
101: AVFLPALLFE SSFSMDVHQI KRCLGQMVLL AGPGVLISTF WIGSLLKCVV LPAAHFSI

Best Arabidopsis Sequence Match ( AT1G14660.2 )
(BLAST)

001: MTSIIGAALP YKSPEKAIAS SSYSAENDSS PVDAVIFAGT SLVLGTACRY LFNGTRVPYT VVLLVIGIFL GSLEYGTKHN LGKLGHGIRI WNGINPDLLL
101: AVFLPVLLFE SSFSMDVHQI KRCMGQMVLL AGPGVLISTF CLGALIKLTF PYNWDWKTSL LLGGLLGATD PVAVVALLKE LGASKKMTTL IDGESLMNDG
201: VSVVVFQLFF KMVMGHNSDW GSIIKFLVQN SFGAVGIGLA FGIASVFWLK FIFNDTVAQI TVTLSASYFA YYTAQEWAGV SGILTVMILG MFFAAFARTA
301: FKGDSHQSLH HFWEMAAYIA NTLVFMLSGV IIAESVLSGQ TISYKGNSWS FLFLLYLYVQ LSRCVGCCFA VARSICKTLG HMIQQSSGNS YLSSDTGTRF
401: LFLTGGIVFL TLVVNGSTTQ LLLHLLRMDT LTATKKRILE YTKFEMMKTA LKAFENLGDD EELGSADWPT VIRHISSLKD LEGRQVNPHD GYEAGSLDPT
501: NIMDIRIRFL NGVQAAYWEM LDDGRITQCT ANVLMQSVDE ALDLVSTSSL SDWRGLEPRV HFPNYYKFLQ SKIIPHKLVT HLIVERLESA CYISSAFLRA
601: HRIARQQLHI FLGNSNIAST VINESEVEGE EAKQFLEDVR DSFPQVLSVL KTRQVTHYVL NHLNGYIKNL EKVGLLEGKE VSHLHDVVQS DLKKLLRHPP
701: SLKLPNVDDL ITSNPLLKDR SSFRSLAIGE TDA

Arabidopsis Description

NHX8Sodium/hydrogen exchanger 8 [Source:UniProtKB/Swiss-Prot;Acc:Q3YL57]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.