Factsheet for Zm00001d031232_P009

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
plasma membrane 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Zm00001d012821_P003
Zm00001d014423_P002
Zm00001d030110_P001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G01980.1	Zm00001d012821_P003	AT1G32230.1	17023541
AT2G01980.1	Zm00001d014423_P002	AT1G32230.1	17023541
AT2G01980.1	Zm00001d030110_P001	AT1G32230.1	17023541

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU79740	Sorghum	cytosol, golgi, plasma membrane	77.06	86.28
Os12t0641100-04	Rice	cytosol, peroxisome, plasma membrane	69.05	76.57
HORVU3Hr1G003150.1	Barley	vacuole	65.67	73.14
TraesCS3A01G023200.2	Wheat	golgi	65.44	72.94
TraesCS3D01G022900.1	Wheat	golgi	65.44	72.94
TraesCS7B01G475500.1	Wheat	plastid	63.79	71.17
TraesCS3B01G021600.2	Wheat	plastid	66.14	70.7
TraesCS2A01G034700.1	Wheat	plasma membrane	55.7	68.57
TraesCSU01G002700.1	Wheat	plasma membrane	56.01	67.2
GSMUA_Achr8P16670_001	Banana	cytosol	56.56	62.99
VIT_01s0011g06550.t01	Wine grape	cytosol	55.7	62.14
Bra026197.1-P	Field mustard	plasma membrane	35.74	61.24
AT1G14660.1	Thale cress	cytosol, golgi, plasma membrane, plastid	35.98	60.58
KRH42480	Soybean	mitochondrion	53.5	59.58
PGSC0003DMT400058653	Potato	plasma membrane	52.47	57.94
Bra017430.1-P	Field mustard	plasma membrane	50.75	56.72
AT2G01980.1	Thale cress	plasma membrane	50.2	55.76
Solyc04g018090.2.1	Tomato	golgi, mitochondrion, plasma membrane, plastid	12.41	47.59
CDY04109	Canola	golgi, plasma membrane	6.52	44.62
PGSC0003DMT400027579	Potato	extracellular, nucleus, plasma membrane	4.4	39.72
Solyc04g018100.2.1	Tomato	cytosol	20.97	38.25
CDY04108	Canola	cytosol, peroxisome, vacuole	2.59	27.73

Protein Annotations

EntrezGene:100383969	Gene3D:2.60.120.10	MapMan:24.2.8.1.2	MapMan:26.6.1.2	UniProt:A0A1D6KH75	InterPro:Cation/H_exchanger
InterPro:Cation/H_exchanger_CPA1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006812
GO:GO:0008150	GO:GO:0015297	GO:GO:0015299	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
GO:GO:1902600	InterPro:IPR000595	InterPro:IPR014710	ProteinID:ONM02408.1	PFAM:PF00999	PFscan:PS50042
PANTHER:PTHR10110	PANTHER:PTHR10110:SF86	InterPro:RmlC-like_jellyroll	SUPFAM:SSF51206	TMHMM:TMhelix	UniParc:UPI000843BA1D
EnsemblPlantsGene:Zm00001d031232	EnsemblPlants:Zm00001d031232_P009	EnsemblPlants:Zm00001d031232_T009	InterPro:cNMP-bd-like	InterPro:cNMP-bd_dom	SEG:seg

Description

Sodium/hydrogen exchanger 7

Coordinates

chr1:-:182925113..182945175

Molecular Weight (calculated)

141853.0 Da

IEP (calculated)

7.458

GRAVY (calculated)

0.046

Length

1273 amino acids

Sequence
(BLAST)

0001: MPSVRGAESL AELAVHVHPL FATLESRCHR PSSSSSLTVA WSSHVRLTSE AVPSVASPSY AAPRQVRSRR DLLPCRYDAV VEAPTCSSAL LMFQEYGTQH
0101: GLGKLGAGIR IWANINPDLL LAVFLPALLF ESSFSMEVHQ IKDKGGGYLN QLIPLPCELM VNTSSRGTFK RCMAQMVLLA GPGVLISTVL LGVAVKLTFP
0201: YNWSWKTSLL LGGLLSATDP VAVVALLKEL GASKKLSTII EGESLMNDGT AIVAYQLFYR MVLGRTFDAG SIIKFLSEVS LGAVALGLAF GIMSILWLGF
0301: IFNDTIIEIA LTLAVSYIAF FTAQDSLEVS GVLTVMTLGM FYAAFAKTAF KGESQQSLHH FWFKVQTQSW FLTLAAVRQY HCVKVRQDFK GFLDLFAPGD
0401: YLTPIGQFFL LVTKSTMKSS VDTELREMVA YIANTLIFIL SGVVIADGVL QNNGHFERHG SSWGFLLLLY VFVQISRVIV VGVLYPMLRH FGYGLDLKEA
0501: MILVWSGLRG AVALSLSLSV KRTSDSVQPY LKPEVGTMFV FFTGGIVFLT LIFNGSTTQF LLHILGMDKL LPTKLRILKY TRYEMLKKAL EAFGELRDDE
0601: ELGPADWVTV KKYITCLNDL DYEPEHPHDV GDEDDCMHIM NLTDIRVRLL NGVQAAYWGM LEEGRITQVT ANILMRSVDE AMDLVSGQTL CDWKGLKSNV
0701: QFPNYYRFLQ RSRLPRKLVT YFTVERLESG CYICAAFLRA HRIARRQLHD FLGDSEVART VIDESNAEGE EARKFLEDVR VTFPQVLRVL KTRQVTYSVL
0801: THLSEYIQNL QKTGLLEEKE MVHLDDALQT DLKKLQRNPP IVKMPRVSDL LNTHPLVGAL PAAVRDTLLS NTKETLRGQG TTLYREGSRP TGIWLVSIGV
0901: VKWTSQRLSR RHSLDPILSH GSTLGLYEVL IGKPYICDMT TDSMVQCFFI ETEKIEELLH SDPSIEIFLW QESALVLARL LVPHRFEKMG MHEMRVLVAE
1001: RSTMNIYIKG EDLEVEQNCI GILLEGFLKI ENLTLITPPA LLLPWNADLS LFGLESSDYC HTARRYQVEA RARIIFFDEA EAAHLHVQTS ASLPQGEPAR
1101: SMSKEHSGLL SWPESFRRSR GSLGLAAEML PGGLSSRALQ LSMYGGSVVS LSSGQQGHRR QRPRHRVQAA TTMTNQKKHS SSYPRMPSIS KERHLLSVQS
1201: EGSNMKRVAA LPEVAATAPA PAGAAQGQRR AMNLQEEYNS SEDSAGEEVI VRVDSPSMLS FRESTAVPPP QEQ

Best Arabidopsis Sequence Match ( AT1G14660.1 )
(BLAST)

001: MTSIIGAALP YKSPEKAIAS SSYSAENDSS PVDAVIFAGT SLVLGTACRY LFNGTRVPYT VVLLVIGIFL GSLEYGTKHN LGKLGHGIRI WNGINPDLLL
101: AVFLPVLLFE SSFSMDVHQI KRCMGQMVLL AGPGVLISTF CLGALIKLTF PYNWDWKTSL LLGGLLGATD PVAVVALLKE LGASKKMTTL IDGESLMNDG
201: VSVVVFQLFF KMVMGHNSDW GSIIKFLVQN SFGAVGIGLA FGIASVFWLK FIFNDTVAQI TVTLSASYFA YYTAQEWAGV SGILTVMILG MFFAAFARTA
301: FKGDSHQSLH HFWEMAAYIA NTLVFMLSGV IIAESVLSGQ TISYKGNSWS FLFLLYLYVQ LSRCVVVGVL YPLLCRSGYG LDWKESIILT WSGLRGAVSL
401: SLALSVKQSS GNSYLSSDTG TRFLFLTGGI VFLTLVVNGS TTQLLLHLLR MDTLTATKKR ILEYTKFEMM KTALKAFENL GDDEELGSAD WPTVIRHISS
501: LKDLEGRQVN PHDGYEAGSL DPTNIMDIRI RFLNGVQAAY WEMLDDGRIT QCTANVLMQS VDEALDLVST SSLSDWRGLE PRVHFPNYYK FLQSKIIPHK
601: LVTHLIVERL ESACYISSAF LRAHRIARQQ LHIFLGNSNI ASTVINESEV EGEEAKQFLE DVRDSFPQVL SVLKTRQVTH YVLNHLNGYI KNLEKVGLLE
701: GKEVSHLHDV VQSDLKKLLR HPPSLKLPNV DDLITSNPLL KDRSSFRSLA IGETDA

Arabidopsis Description

NHX8Sodium/hydrogen exchanger 8 [Source:UniProtKB/Swiss-Prot;Acc:Q3YL57]
SUBAcon: [plasma membrane,golgi,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.