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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, nucleus

Predictor Summary:
  • nucleus 2
  • plasma membrane 2
  • plastid 1
  • extracellular 2
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G135600.1 Wheat endoplasmic reticulum 41.84 7.65
Bra026197.1-P Field mustard plasma membrane 38.3 7.27
TraesCS2A01G133600.1 Wheat endoplasmic reticulum 39.01 7.13
AT1G14660.1 Thale cress cytosol, golgi, plasma membrane, plastid 37.59 7.01
TraesCS7A01G462000.1 Wheat plasma membrane 40.43 5.75
TraesCS7B01G475500.1 Wheat plastid 45.39 5.61
TraesCS7A01G397700.1 Wheat golgi 39.72 5.56
Os12t0641100-04 Rice cytosol, peroxisome, plasma membrane 43.26 5.31
TraesCS2A01G034700.1 Wheat plasma membrane 38.3 5.22
TraesCS3A01G023200.2 Wheat golgi 41.13 5.08
TraesCS3D01G022900.1 Wheat golgi 41.13 5.08
OQU79740 Sorghum cytosol, golgi, plasma membrane 40.43 5.01
GSMUA_Achr8P16670_001 Banana cytosol 40.43 4.99
TraesCSU01G002700.1 Wheat plasma membrane 36.88 4.9
TraesCS3B01G021600.2 Wheat plastid 41.13 4.87
PGSC0003DMT400058653 Potato plasma membrane 39.72 4.86
AT2G01980.1 Thale cress plasma membrane 36.88 4.54
Bra017430.1-P Field mustard plasma membrane 36.17 4.48
Zm00001d031232_P009 Maize plastid 39.72 4.4
HORVU7Hr1G085980.11 Barley plastid 0.0 0.0
Protein Annotations
EnsemblPlants:PGSC0003DMT400027579EnsemblPlantsGene:PGSC0003DMG400010630GO:GO:0005575GO:GO:0016020GO:GO:0016021PGSC:PGSC0003DMG400010630
TMHMM:TMhelixUniParc:UPI000295998CUniProt:M1APV9MapMan:35.1::
Description
Salt overly sensitive 1 [Source:PGSC_GENE;Acc:PGSC0003DMG400010630]
Coordinates
chr4:+:12129947..12133788
Molecular Weight (calculated)
15717.9 Da
IEP (calculated)
4.814
GRAVY (calculated)
0.035
Length
141 amino acids
Sequence
(BLAST)
001: MVFFLNFQDA SGDPKYLSSE TGAMFVFLTG GSVLLTLIIN GSTTQLLLSL FGMDALSESE KIMVNYAKHQ LLRKAEEFSR ICSGSNNPFD WITVGGYATC
101: IKDVCEDTVW PPCTTNHGYL EINDMKTMRV CFLKGQQLHP D
Best Arabidopsis Sequence Match ( AT1G14660.2 )
(BLAST)
001: MTSIIGAALP YKSPEKAIAS SSYSAENDSS PVDAVIFAGT SLVLGTACRY LFNGTRVPYT VVLLVIGIFL GSLEYGTKHN LGKLGHGIRI WNGINPDLLL
101: AVFLPVLLFE SSFSMDVHQI KRCMGQMVLL AGPGVLISTF CLGALIKLTF PYNWDWKTSL LLGGLLGATD PVAVVALLKE LGASKKMTTL IDGESLMNDG
201: VSVVVFQLFF KMVMGHNSDW GSIIKFLVQN SFGAVGIGLA FGIASVFWLK FIFNDTVAQI TVTLSASYFA YYTAQEWAGV SGILTVMILG MFFAAFARTA
301: FKGDSHQSLH HFWEMAAYIA NTLVFMLSGV IIAESVLSGQ TISYKGNSWS FLFLLYLYVQ LSRCVGCCFA VARSICKTLG HMIQQSSGNS YLSSDTGTRF
401: LFLTGGIVFL TLVVNGSTTQ LLLHLLRMDT LTATKKRILE YTKFEMMKTA LKAFENLGDD EELGSADWPT VIRHISSLKD LEGRQVNPHD GYEAGSLDPT
501: NIMDIRIRFL NGVQAAYWEM LDDGRITQCT ANVLMQSVDE ALDLVSTSSL SDWRGLEPRV HFPNYYKFLQ SKIIPHKLVT HLIVERLESA CYISSAFLRA
601: HRIARQQLHI FLGNSNIAST VINESEVEGE EAKQFLEDVR DSFPQVLSVL KTRQVTHYVL NHLNGYIKNL EKVGLLEGKE VSHLHDVVQS DLKKLLRHPP
701: SLKLPNVDDL ITSNPLLKDR SSFRSLAIGE TDA
Arabidopsis Description
NHX8Sodium/hydrogen exchanger 8 [Source:UniProtKB/Swiss-Prot;Acc:Q3YL57]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.