Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- golgi 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G397700.1 | Wheat | golgi | 95.86 | 94.25 |
| TraesCS2A01G133600.1 | Wheat | endoplasmic reticulum | 69.32 | 89.11 |
| TraesCS3A01G023200.2 | Wheat | golgi | 70.84 | 61.47 |
| TraesCS2A01G034700.1 | Wheat | plasma membrane | 62.26 | 59.67 |
| Bra026197.1-P | Field mustard | plasma membrane | 42.48 | 56.66 |
| AT1G14660.1 | Thale cress | cytosol, golgi, plasma membrane, plastid | 42.18 | 55.29 |
| GSMUA_Achr8P16670_001 | Banana | cytosol | 61.76 | 53.54 |
| VIT_01s0011g06550.t01 | Wine grape | cytosol | 60.75 | 52.76 |
| KRH42480 | Soybean | mitochondrion | 57.62 | 49.96 |
| PGSC0003DMT400058653 | Potato | plasma membrane | 57.72 | 49.61 |
| Bra017430.1-P | Field mustard | plasma membrane | 56.21 | 48.9 |
| AT2G01980.1 | Thale cress | plasma membrane | 55.4 | 47.91 |
| Solyc04g018090.2.1 | Tomato | golgi, mitochondrion, plasma membrane, plastid | 16.04 | 47.89 |
| CDY04108 | Canola | cytosol, peroxisome, vacuole | 5.35 | 44.54 |
| PGSC0003DMT400027579 | Potato | extracellular, nucleus, plasma membrane | 5.75 | 40.43 |
| Solyc04g018100.2.1 | Tomato | cytosol | 25.03 | 35.53 |
| CDY04109 | Canola | golgi, plasma membrane | 6.66 | 35.48 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:24.2.8.1.2 | MapMan:26.6.1.2 | InterPro:Cation/H_exchanger | InterPro:Cation/H_exchanger_CPA1 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0015299 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR000595 | InterPro:IPR014710 | PFAM:PF00999 |
| PFscan:PS50042 | PANTHER:PTHR10110 | PANTHER:PTHR10110:SF86 | InterPro:RmlC-like_jellyroll | SUPFAM:SSF51206 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS7A01G462000 | EnsemblPlants:TraesCS7A01G462000.1 | InterPro:cNMP-bd-like | InterPro:cNMP-bd_dom | SEG:seg | : |
Description
No Description!
Coordinates
chr7A:-:658637042..658651135
Molecular Weight (calculated)
109180.0 Da
IEP (calculated)
6.284
GRAVY (calculated)
0.219
Length
991 amino acids
Sequence
(BLAST)
(BLAST)
001: MATAAEPDDA MLFAGVSLVL GAACRHLLDG TRVPYTIALL VLGVALGSLE YGTKDGLGKL GAGMRIWANI NPDLLLAAFL PALLFESAFS MEAHQIKKCM
101: AQMLLLAGPG VLMSTFLLGT VLKLTSPYDW NWETSLLLGG LLSATDPVAV VAVLKELGTS KKLSTIIEGE SLMNDGVSVV VYQLFLQMVL GRSFNTGSIL
201: MFLSEVSLGA VALGLAFAII SLLWLGFTFN DTILANSCSI LLSILFFFTS NIVHYQVQDA LKYSGILTVT ALGMFYAAFA KTTFKGDNRR SLHDFWEIVA
301: YIANTLIFIL SGVIIADGVL RHNVHFERHG TSWGFLLLLY FYVQMARAAV VGALYLLLRY FGYGLDLKEA IIIVWSGLRG AVSLSLALSV KRASDTAQPF
401: LKPEVGTMFV FFTGGIVFLT LILNGSTTQF LLHALGMDNL SVTKLRMLNY TRHEILNNTL EAFGDLKDDE ELGPADWVTV KKYITGLSNL EDEHAHPHDD
501: NHDHVHTMNL KDGRVRLLNV DEAMDLVSSR PLCDWNSLQS SVHFPSYYRF LSASMLPQSF ITYFTVQRLE SGCYICAAFL RAHRIARRQL QNFLGDSEIA
601: KIVIDESNAG GEEARKFLEE VRCTFPQLLC VLKTRQVTYA VLTHLSENVQ NLWKTGLLEE KEMAHLDDAW QTDLKKLKRN PQLVKMPRVG DLLGTHPLVG
701: MLPAAVRAPL LSNTKEKVKG HGAALYMEGS RATGIWIVSI GAVKWRSQRL SSRHSLHPIF PHGSTLGLYE VLTGKSCLCD MITDSLVRCF FIEAEKIDQL
801: RRSDPSVEAF LWQLQENAAV IAKLLIPRVF EKMTMQETRL LVSTGSTMNL YTKGEDIMLE HNYIGILLEG TLKAENQNSI LPPGVLLPSN MDLELLGLES
901: SAMNRMDSCY AADSYQVEAQ ARVLIFEVGR LFTEANGQRN QPGGSFSAEA LQLSVEESTG EEQVIITVDS PNKLPLGDSS AGSSSGVTRG S
101: AQMLLLAGPG VLMSTFLLGT VLKLTSPYDW NWETSLLLGG LLSATDPVAV VAVLKELGTS KKLSTIIEGE SLMNDGVSVV VYQLFLQMVL GRSFNTGSIL
201: MFLSEVSLGA VALGLAFAII SLLWLGFTFN DTILANSCSI LLSILFFFTS NIVHYQVQDA LKYSGILTVT ALGMFYAAFA KTTFKGDNRR SLHDFWEIVA
301: YIANTLIFIL SGVIIADGVL RHNVHFERHG TSWGFLLLLY FYVQMARAAV VGALYLLLRY FGYGLDLKEA IIIVWSGLRG AVSLSLALSV KRASDTAQPF
401: LKPEVGTMFV FFTGGIVFLT LILNGSTTQF LLHALGMDNL SVTKLRMLNY TRHEILNNTL EAFGDLKDDE ELGPADWVTV KKYITGLSNL EDEHAHPHDD
501: NHDHVHTMNL KDGRVRLLNV DEAMDLVSSR PLCDWNSLQS SVHFPSYYRF LSASMLPQSF ITYFTVQRLE SGCYICAAFL RAHRIARRQL QNFLGDSEIA
601: KIVIDESNAG GEEARKFLEE VRCTFPQLLC VLKTRQVTYA VLTHLSENVQ NLWKTGLLEE KEMAHLDDAW QTDLKKLKRN PQLVKMPRVG DLLGTHPLVG
701: MLPAAVRAPL LSNTKEKVKG HGAALYMEGS RATGIWIVSI GAVKWRSQRL SSRHSLHPIF PHGSTLGLYE VLTGKSCLCD MITDSLVRCF FIEAEKIDQL
801: RRSDPSVEAF LWQLQENAAV IAKLLIPRVF EKMTMQETRL LVSTGSTMNL YTKGEDIMLE HNYIGILLEG TLKAENQNSI LPPGVLLPSN MDLELLGLES
901: SAMNRMDSCY AADSYQVEAQ ARVLIFEVGR LFTEANGQRN QPGGSFSAEA LQLSVEESTG EEQVIITVDS PNKLPLGDSS AGSSSGVTRG S
001: MTSIIGAALP YKSPEKAIAS SSYSAENDSS PVDAVIFAGT SLVLGTACRY LFNGTRVPYT VVLLVIGIFL GSLEYGTKHN LGKLGHGIRI WNGINPDLLL
101: AVFLPVLLFE SSFSMDVHQI KRCMGQMVLL AGPGVLISTF CLGALIKLTF PYNWDWKTSL LLGGLLGATD PVAVVALLKE LGASKKMTTL IDGESLMNDG
201: VSVVVFQLFF KMVMGHNSDW GSIIKFLVQN SFGAVGIGLA FGIASVFWLK FIFNDTVAQI TVTLSASYFA YYTAQEWAGV SGILTVMILG MFFAAFARTA
301: FKGDSHQSLH HFWEMAAYIA NTLVFMLSGV IIAESVLSGQ TISYKGNSWS FLFLLYLYVQ LSRCVVVGVL YPLLCRSGYG LDWKESIILT WSGLRGAVSL
401: SLALSVKQSS GNSYLSSDTG TRFLFLTGGI VFLTLVVNGS TTQLLLHLLR MDTLTATKKR ILEYTKFEMM KTALKAFENL GDDEELGSAD WPTVIRHISS
501: LKDLEGRQVN PHDGYEAGSL DPTNIMDIRI RFLNGVQAAY WEMLDDGRIT QCTANVLMQS VDEALDLVST SSLSDWRGLE PRVHFPNYYK FLQSKIIPHK
601: LVTHLIVERL ESACYISSAF LRAHRIARQQ LHIFLGNSNI ASTVINESEV EGEEAKQFLE DVRDSFPQVL SVLKTRQVTH YVLNHLNGYI KNLEKVGLLE
701: GKEVSHLHDV VQSDLKKLLR HPPSLKLPNV DDLITSNPLL KDRSSFRSLA IGETDA
101: AVFLPVLLFE SSFSMDVHQI KRCMGQMVLL AGPGVLISTF CLGALIKLTF PYNWDWKTSL LLGGLLGATD PVAVVALLKE LGASKKMTTL IDGESLMNDG
201: VSVVVFQLFF KMVMGHNSDW GSIIKFLVQN SFGAVGIGLA FGIASVFWLK FIFNDTVAQI TVTLSASYFA YYTAQEWAGV SGILTVMILG MFFAAFARTA
301: FKGDSHQSLH HFWEMAAYIA NTLVFMLSGV IIAESVLSGQ TISYKGNSWS FLFLLYLYVQ LSRCVVVGVL YPLLCRSGYG LDWKESIILT WSGLRGAVSL
401: SLALSVKQSS GNSYLSSDTG TRFLFLTGGI VFLTLVVNGS TTQLLLHLLR MDTLTATKKR ILEYTKFEMM KTALKAFENL GDDEELGSAD WPTVIRHISS
501: LKDLEGRQVN PHDGYEAGSL DPTNIMDIRI RFLNGVQAAY WEMLDDGRIT QCTANVLMQS VDEALDLVST SSLSDWRGLE PRVHFPNYYK FLQSKIIPHK
601: LVTHLIVERL ESACYISSAF LRAHRIARQQ LHIFLGNSNI ASTVINESEV EGEEAKQFLE DVRDSFPQVL SVLKTRQVTH YVLNHLNGYI KNLEKVGLLE
701: GKEVSHLHDV VQSDLKKLLR HPPSLKLPNV DDLITSNPLL KDRSSFRSLA IGETDA
Arabidopsis Description
NHX8Sodium/hydrogen exchanger 8 [Source:UniProtKB/Swiss-Prot;Acc:Q3YL57]
SUBAcon: [plasma membrane,golgi,plastid,cytosol]
SUBAcon: [plasma membrane,golgi,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.