Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G022900.1 | Wheat | golgi | 97.46 | 97.46 |
| HORVU3Hr1G003150.1 | Barley | vacuole | 92.12 | 92.04 |
| TraesCS3B01G021600.2 | Wheat | plastid | 95.36 | 91.44 |
| TraesCS2A01G034700.1 | Wheat | plasma membrane | 73.91 | 81.62 |
| Os12t0641100-04 | Rice | cytosol, peroxisome, plasma membrane | 79.77 | 79.36 |
| OQU79740 | Sorghum | cytosol, golgi, plasma membrane | 77.23 | 77.57 |
| TraesCS2A01G133600.1 | Wheat | endoplasmic reticulum | 50.18 | 74.32 |
| TraesCS7A01G397700.1 | Wheat | golgi | 63.13 | 71.53 |
| TraesCS7A01G462000.1 | Wheat | plasma membrane | 61.47 | 70.84 |
| GSMUA_Achr8P16670_001 | Banana | cytosol | 65.5 | 65.44 |
| Zm00001d031232_P009 | Maize | plastid | 72.94 | 65.44 |
| VIT_01s0011g06550.t01 | Wine grape | cytosol | 63.57 | 63.63 |
| Bra026197.1-P | Field mustard | plasma membrane | 40.63 | 62.45 |
| AT1G14660.1 | Thale cress | cytosol, golgi, plasma membrane, plastid | 40.98 | 61.9 |
| KRH42480 | Soybean | mitochondrion | 61.21 | 61.15 |
| PGSC0003DMT400058653 | Potato | plasma membrane | 59.28 | 58.72 |
| Bra017430.1-P | Field mustard | plasma membrane | 58.06 | 58.21 |
| AT2G01980.1 | Thale cress | plasma membrane | 57.79 | 57.59 |
| CDY04108 | Canola | cytosol, peroxisome, vacuole | 5.25 | 50.42 |
| CDY04109 | Canola | golgi, plasma membrane | 7.53 | 46.24 |
| PGSC0003DMT400027579 | Potato | extracellular, nucleus, plasma membrane | 5.08 | 41.13 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:24.2.8.1.2 | MapMan:26.6.1.2 | InterPro:Cation/H_exchanger | InterPro:Cation/H_exchanger_CPA1 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0015299 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR000595 | InterPro:IPR014710 | PFAM:PF00027 |
| PFAM:PF00999 | PFscan:PS50042 | PANTHER:PTHR10110 | PANTHER:PTHR10110:SF86 | InterPro:RmlC-like_jellyroll | SUPFAM:SSF51206 |
| TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3A01G023200 | EnsemblPlants:TraesCS3A01G023200.2 | InterPro:cNMP-bd-like | InterPro:cNMP-bd_dom | TIGR:cd00038 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3A:+:12969655..12980649
Molecular Weight (calculated)
126227.0 Da
IEP (calculated)
7.327
GRAVY (calculated)
0.113
Length
1142 amino acids
Sequence
(BLAST)
(BLAST)
0001: METEEAGSPS PDDAVLFFGV ALVLGIASRH LLRGTRVPYT VALLVLGVAL GGLEYGTKHG LGKLGAGIRI WSAINPDLLL AVFLPALLFE SSFSMEVHQI
0101: KKCMAQMVLL AVPGVVISTV LLGAAVKLTF PYDWNWKTSF LFSGLLSATD PVAVVALLKD LGASKKLSTI IEGESLMNDG TAIVVYQLFY RMVLGKTFDA
0201: GSIIKFLSQV SLGAVALGLA FGIASVLWLG FIFNDTIIEI SLTLAVSYIA FFTAQDALEV SGVLAVMTLG MFYAAFAKTA FKGDSQQSLH HFWEMVAYIA
0301: NTLIFILSGV VIADGVLQDN IHFERHGTSW GFLVLLYVFV QISRAVVVGV LYPLLRHFGY GMDIKEATVL VWSGLRGAVA LSLSLSVKRA SDSVQTYLKP
0401: EVGTMFVFFT GGIVFLTLIL NGSTTQFLLH LLGLGKLSAT KLRVLKYTQY EMLNKALEAF GDLRDDEELG PVDWVNVKKY ITCLNNLEDE QAHPHDVPDK
0501: DDHIHTMNLK DTRVRLLNGV QAAYWGMLEE GRITQSTANI LMRSVDEAMD LVSSQSLCDW KGLRSNVHFP NYYRFLQMSR LPRRLVTYFT VERLELGCYI
0601: CAAFLRAHRI ARRQLHDFLG DSEIARIVID ESTAVGEEAK KFLEDVRVTF PQVLRALKTR QVTYAVLTHL SEYIQDLGKT GLLEEKEIVH LDDALQTDLK
0701: KLQRNPPLVK MPRVRELLNT HPLVGALSAD VRDPLLSNTK ETIKVHGTIL YREGSRRTGI WLVSTGIVKW TSRRLCTRHS LDPILSHGST LGLYEALTGK
0801: PYICDIITES VVHCFFIEAE KIEQLRQSDP SIEDFMWQES ALVIARILLP QIFEKMAMRE MRVLISERSS MNVYIKGEAI ELGHNNVGIL LEGFLKTENR
0901: TLITAPAVLL PSNTDLNLFG LQSSAMNQID YCYTAPSYQV EARARAIIFE IGSLDIEADL QRSASLLSST LGPSRTQSKE HVGLLRWPES FRRSSGPGNA
1001: SLAEIRSQPG NFSARALQVS MYGSMTDGMH RARRQPRLAH VEGNQKHSVS YPKVPSRAAD TRPLLSVRSE GSNAMKRKSA PAPAIAPALA PFPPPLAEGR
1101: QRRAVGEDDD SSDESVGEEV IVRVDSPSML SFNPPSGPPR GS
0101: KKCMAQMVLL AVPGVVISTV LLGAAVKLTF PYDWNWKTSF LFSGLLSATD PVAVVALLKD LGASKKLSTI IEGESLMNDG TAIVVYQLFY RMVLGKTFDA
0201: GSIIKFLSQV SLGAVALGLA FGIASVLWLG FIFNDTIIEI SLTLAVSYIA FFTAQDALEV SGVLAVMTLG MFYAAFAKTA FKGDSQQSLH HFWEMVAYIA
0301: NTLIFILSGV VIADGVLQDN IHFERHGTSW GFLVLLYVFV QISRAVVVGV LYPLLRHFGY GMDIKEATVL VWSGLRGAVA LSLSLSVKRA SDSVQTYLKP
0401: EVGTMFVFFT GGIVFLTLIL NGSTTQFLLH LLGLGKLSAT KLRVLKYTQY EMLNKALEAF GDLRDDEELG PVDWVNVKKY ITCLNNLEDE QAHPHDVPDK
0501: DDHIHTMNLK DTRVRLLNGV QAAYWGMLEE GRITQSTANI LMRSVDEAMD LVSSQSLCDW KGLRSNVHFP NYYRFLQMSR LPRRLVTYFT VERLELGCYI
0601: CAAFLRAHRI ARRQLHDFLG DSEIARIVID ESTAVGEEAK KFLEDVRVTF PQVLRALKTR QVTYAVLTHL SEYIQDLGKT GLLEEKEIVH LDDALQTDLK
0701: KLQRNPPLVK MPRVRELLNT HPLVGALSAD VRDPLLSNTK ETIKVHGTIL YREGSRRTGI WLVSTGIVKW TSRRLCTRHS LDPILSHGST LGLYEALTGK
0801: PYICDIITES VVHCFFIEAE KIEQLRQSDP SIEDFMWQES ALVIARILLP QIFEKMAMRE MRVLISERSS MNVYIKGEAI ELGHNNVGIL LEGFLKTENR
0901: TLITAPAVLL PSNTDLNLFG LQSSAMNQID YCYTAPSYQV EARARAIIFE IGSLDIEADL QRSASLLSST LGPSRTQSKE HVGLLRWPES FRRSSGPGNA
1001: SLAEIRSQPG NFSARALQVS MYGSMTDGMH RARRQPRLAH VEGNQKHSVS YPKVPSRAAD TRPLLSVRSE GSNAMKRKSA PAPAIAPALA PFPPPLAEGR
1101: QRRAVGEDDD SSDESVGEEV IVRVDSPSML SFNPPSGPPR GS
0001: MTTVIDATMA YRFLEEATDS SSSSSSSKLE SSPVDAVLFV GMSLVLGIAS RHLLRGTRVP YTVALLVIGI ALGSLEYGAK HNLGKIGHGI RIWNEIDPEL
0101: LLAVFLPALL FESSFSMEVH QIKRCLGQMV LLAVPGVLIS TACLGSLVKV TFPYEWDWKT SLLLGGLLSA TDPVAVVALL KELGASKKLS TIIEGESLMN
0201: DGTAIVVFQL FLKMAMGQNS DWSSIIKFLL KVALGAVGIG LAFGIASVIW LKFIFNDTVI EITLTIAVSY FAYYTAQEWA GASGVLTVMT LGMFYAAFAR
0301: TAFKGDSQKS LHHFWEMVAY IANTLIFILS GVVIAEGILD SDKIAYQGNS WRFLFLLYVY IQLSRVVVVG VLYPLLCRFG YGLDWKESII LVWSGLRGAV
0401: ALALSLSVKQ SSGNSHISKE TGTLFLFFTG GIVFLTLIVN GSTTQFVLRL LRMDILPAPK KRILEYTKYE MLNKALRAFQ DLGDDEELGP ADWPTVESYI
0501: SSLKGSEGEL VHHPHNGSKI GSLDPKSLKD IRMRFLNGVQ ATYWEMLDEG RISEVTANIL MQSVDEALDQ VSTTLCDWRG LKPHVNFPNY YNFLHSKVVP
0601: RKLVTYFAVE RLESACYISA AFLRAHTIAR QQLYDFLGES NIGSIVINES EKEGEEAKKF LEKVRSSFPQ VLRVVKTKQV TYSVLNHLLG YIENLEKVGL
0701: LEEKEIAHLH DAVQTGLKKL LRNPPIVKLP KLSDMITSHP LSVALPPAFC EPLKHSKKEP MKLRGVTLYK EGSKPTGVWL IFDGIVKWKS KILSNNHSLH
0801: PTFSHGSTLG LYEVLTGKPY LCDLITDSMV LCFFIDSEKI LSLQSDSTID DFLWQESALV LLKLLRPQIF ESVAMQELRA LVSTESSKLT TYVTGESIEI
0901: DCNSIGLLLE GFVKPVGIKE ELISSPAALS PSNGNQSFHN SSEASGIMRV SFSQQATQYI VETRARAIIF NIGAFGADRT LHRRPSSLTP PRSSSSDQLQ
1001: RSFRKEHRGL MSWPENIYAK QQQEINKTTL SLSERAMQLS IFGSMVNVYR RSVSFGGIYN NKLQDNLLYK KLPLNPAQGL VSAKSESSIV TKKQLETRKH
1101: ACQLPLKGES STRQNTMVES SDEEDEDEGI VVRIDSPSKI VFRNDL
0101: LLAVFLPALL FESSFSMEVH QIKRCLGQMV LLAVPGVLIS TACLGSLVKV TFPYEWDWKT SLLLGGLLSA TDPVAVVALL KELGASKKLS TIIEGESLMN
0201: DGTAIVVFQL FLKMAMGQNS DWSSIIKFLL KVALGAVGIG LAFGIASVIW LKFIFNDTVI EITLTIAVSY FAYYTAQEWA GASGVLTVMT LGMFYAAFAR
0301: TAFKGDSQKS LHHFWEMVAY IANTLIFILS GVVIAEGILD SDKIAYQGNS WRFLFLLYVY IQLSRVVVVG VLYPLLCRFG YGLDWKESII LVWSGLRGAV
0401: ALALSLSVKQ SSGNSHISKE TGTLFLFFTG GIVFLTLIVN GSTTQFVLRL LRMDILPAPK KRILEYTKYE MLNKALRAFQ DLGDDEELGP ADWPTVESYI
0501: SSLKGSEGEL VHHPHNGSKI GSLDPKSLKD IRMRFLNGVQ ATYWEMLDEG RISEVTANIL MQSVDEALDQ VSTTLCDWRG LKPHVNFPNY YNFLHSKVVP
0601: RKLVTYFAVE RLESACYISA AFLRAHTIAR QQLYDFLGES NIGSIVINES EKEGEEAKKF LEKVRSSFPQ VLRVVKTKQV TYSVLNHLLG YIENLEKVGL
0701: LEEKEIAHLH DAVQTGLKKL LRNPPIVKLP KLSDMITSHP LSVALPPAFC EPLKHSKKEP MKLRGVTLYK EGSKPTGVWL IFDGIVKWKS KILSNNHSLH
0801: PTFSHGSTLG LYEVLTGKPY LCDLITDSMV LCFFIDSEKI LSLQSDSTID DFLWQESALV LLKLLRPQIF ESVAMQELRA LVSTESSKLT TYVTGESIEI
0901: DCNSIGLLLE GFVKPVGIKE ELISSPAALS PSNGNQSFHN SSEASGIMRV SFSQQATQYI VETRARAIIF NIGAFGADRT LHRRPSSLTP PRSSSSDQLQ
1001: RSFRKEHRGL MSWPENIYAK QQQEINKTTL SLSERAMQLS IFGSMVNVYR RSVSFGGIYN NKLQDNLLYK KLPLNPAQGL VSAKSESSIV TKKQLETRKH
1101: ACQLPLKGES STRQNTMVES SDEEDEDEGI VVRIDSPSKI VFRNDL
Arabidopsis Description
NHX7Sodium/hydrogen exchanger 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKW9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.