Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- golgi 1
- plasma membrane 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G022900.1 | Wheat | golgi | 92.44 | 96.41 |
| TraesCS3A01G023200.2 | Wheat | golgi | 91.44 | 95.36 |
| HORVU3Hr1G003150.1 | Barley | vacuole | 90.01 | 93.79 |
| TraesCS7B01G475500.1 | Wheat | plastid | 83.88 | 87.55 |
| Os12t0641100-04 | Rice | cytosol, peroxisome, plasma membrane | 77.33 | 80.23 |
| OQU79740 | Sorghum | cytosol, golgi, plasma membrane | 74.14 | 77.66 |
| Zm00001d031232_P009 | Maize | plastid | 70.7 | 66.14 |
| GSMUA_Achr8P16670_001 | Banana | cytosol | 62.97 | 65.62 |
| VIT_01s0011g06550.t01 | Wine grape | cytosol | 61.46 | 64.15 |
| Bra026197.1-P | Field mustard | plasma membrane | 39.38 | 63.12 |
| AT1G14660.1 | Thale cress | cytosol, golgi, plasma membrane, plastid | 39.46 | 62.17 |
| KRH42480 | Soybean | mitochondrion | 58.69 | 61.15 |
| PGSC0003DMT400058653 | Potato | plasma membrane | 57.18 | 59.06 |
| Bra017430.1-P | Field mustard | plasma membrane | 55.92 | 58.47 |
| AT2G01980.1 | Thale cress | plasma membrane | 55.67 | 57.85 |
| CDY04108 | Canola | cytosol, peroxisome, vacuole | 5.37 | 53.78 |
| Solyc04g018090.2.1 | Tomato | golgi, mitochondrion, plasma membrane, plastid | 14.86 | 53.31 |
| CDY04109 | Canola | golgi, plasma membrane | 7.22 | 46.24 |
| PGSC0003DMT400027579 | Potato | extracellular, nucleus, plasma membrane | 4.87 | 41.13 |
| Solyc04g018100.2.1 | Tomato | cytosol | 21.91 | 37.39 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:24.2.8.1.2 | MapMan:26.6.1.2 | InterPro:Cation/H_exchanger | InterPro:Cation/H_exchanger_CPA1 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0015299 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR000595 | InterPro:IPR014710 | PFAM:PF00027 |
| PFAM:PF00999 | PFscan:PS50042 | PANTHER:PTHR10110 | PANTHER:PTHR10110:SF86 | InterPro:RmlC-like_jellyroll | SUPFAM:SSF51206 |
| TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3B01G021600 | EnsemblPlants:TraesCS3B01G021600.2 | InterPro:cNMP-bd-like | InterPro:cNMP-bd_dom | TIGR:cd00038 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:9166343..9177304
Molecular Weight (calculated)
131434.0 Da
IEP (calculated)
8.479
GRAVY (calculated)
0.085
Length
1191 amino acids
Sequence
(BLAST)
(BLAST)
0001: MCPPRLPSLI RSHSQQEKKE TKLSSPHRST GSLVSSLRSS PPSAAAAAAM GTKEPGSPSP DDAVLFFGVA LVLGIASRHL LRGTRVPYTV ALLVLGVALG
0101: GLEYGTKHGL GKLGAGIRIW AAINPDLLLA VFLPALLFES SFSMEVHQIK KCMAQMVLLA VPGVVISTVL LGAAVKLTFP YDWNWKTSFL FSGLLSATDP
0201: VAVVALLKDL GASKKLSTII EGESLMNDGT AIVVYQLFYR MVLGKTFDAG SIIKFLSQVS LGAVALGLAF GIASVLWLGF IFNDTIIEIS LTVAVSYIAF
0301: FTAQDALEVS GVLAVMTLGM FYAAFAKTAF KGDSQQSLHH FWEMVAYIAN TLIFILSGVV IADGVLQDNI HFERHGTSWG FLLLLYVFVQ ISRAVVVGVL
0401: YPLLRHFGYG MDIKEATVLV WSGLRGAVAL SLSLSVKRAS DSVQTYLKPE VGTMFVFFTG GIVFLTLILN GSTTQFLLHL LGLGKLSATK LRVLKYTQYE
0501: MLNKALEAFG DLRDDEELGP VDWVNVKKYI TCLNNLEDEQ AHPHDVPDKD DHVHTMNLKD TRVRLLNGVQ AAYWGMLEEG RITQSTANIL MRSVDEAMDL
0601: VSSQSLCDWK GLRSNVHFPN YYRFLQMSRL PRRLVTYFTV ERLELGCYIC AAFLRAHRIA RRQLHDFLGD SEIARIVIDE SIAAGEEAKK FLEDVRVTFP
0701: QVLRVLKTRQ VTYAVLTHLS EYIQDLGKTG LLEEKEIVHL DDALQTDLKK LKRNPPLVKM PRVRELLNTH PLVGALPAAL RDPLLSNTKE TIKGHGTVLY
0801: TEGSRPTGVW LVSSGIVKWT SQRLCTRHSL DPILSHGSTL GLYEALIGKP YICDIITESV VHCFFIEAEK IEQLRQSDPS IEDFMWQESA LVIARILLPQ
0901: IFEKMAMREM RVLISERSTT NVYIKGEEIE LRHNYIGILL EGFLKTENRT LITPPAVLLP SNTDLNLFGL QSSAMNQIDY CYTAPSYQVE ARARVILFEM
1001: RRPDIESDLQ RSASLLSPAL GPSRTQSKEH VGLLRWPESF RKSRGPGNAS LAEIRSQSGS FSARALQVSM YGSMMDGMRP ARRQPRLDHV EANQKHSASY
1101: PKVPSRAADT RPLLSVRSEG SNAMSRKSAP APAIAPPLAS FLPPLAAGRQ RRAVGEDDDS SDESVGEEVI VRVDSPSMLS FNPPSGPPRG S
0101: GLEYGTKHGL GKLGAGIRIW AAINPDLLLA VFLPALLFES SFSMEVHQIK KCMAQMVLLA VPGVVISTVL LGAAVKLTFP YDWNWKTSFL FSGLLSATDP
0201: VAVVALLKDL GASKKLSTII EGESLMNDGT AIVVYQLFYR MVLGKTFDAG SIIKFLSQVS LGAVALGLAF GIASVLWLGF IFNDTIIEIS LTVAVSYIAF
0301: FTAQDALEVS GVLAVMTLGM FYAAFAKTAF KGDSQQSLHH FWEMVAYIAN TLIFILSGVV IADGVLQDNI HFERHGTSWG FLLLLYVFVQ ISRAVVVGVL
0401: YPLLRHFGYG MDIKEATVLV WSGLRGAVAL SLSLSVKRAS DSVQTYLKPE VGTMFVFFTG GIVFLTLILN GSTTQFLLHL LGLGKLSATK LRVLKYTQYE
0501: MLNKALEAFG DLRDDEELGP VDWVNVKKYI TCLNNLEDEQ AHPHDVPDKD DHVHTMNLKD TRVRLLNGVQ AAYWGMLEEG RITQSTANIL MRSVDEAMDL
0601: VSSQSLCDWK GLRSNVHFPN YYRFLQMSRL PRRLVTYFTV ERLELGCYIC AAFLRAHRIA RRQLHDFLGD SEIARIVIDE SIAAGEEAKK FLEDVRVTFP
0701: QVLRVLKTRQ VTYAVLTHLS EYIQDLGKTG LLEEKEIVHL DDALQTDLKK LKRNPPLVKM PRVRELLNTH PLVGALPAAL RDPLLSNTKE TIKGHGTVLY
0801: TEGSRPTGVW LVSSGIVKWT SQRLCTRHSL DPILSHGSTL GLYEALIGKP YICDIITESV VHCFFIEAEK IEQLRQSDPS IEDFMWQESA LVIARILLPQ
0901: IFEKMAMREM RVLISERSTT NVYIKGEEIE LRHNYIGILL EGFLKTENRT LITPPAVLLP SNTDLNLFGL QSSAMNQIDY CYTAPSYQVE ARARVILFEM
1001: RRPDIESDLQ RSASLLSPAL GPSRTQSKEH VGLLRWPESF RKSRGPGNAS LAEIRSQSGS FSARALQVSM YGSMMDGMRP ARRQPRLDHV EANQKHSASY
1101: PKVPSRAADT RPLLSVRSEG SNAMSRKSAP APAIAPPLAS FLPPLAAGRQ RRAVGEDDDS SDESVGEEVI VRVDSPSMLS FNPPSGPPRG S
0001: MTTVIDATMA YRFLEEATDS SSSSSSSKLE SSPVDAVLFV GMSLVLGIAS RHLLRGTRVP YTVALLVIGI ALGSLEYGAK HNLGKIGHGI RIWNEIDPEL
0101: LLAVFLPALL FESSFSMEVH QIKRCLGQMV LLAVPGVLIS TACLGSLVKV TFPYEWDWKT SLLLGGLLSA TDPVAVVALL KELGASKKLS TIIEGESLMN
0201: DGTAIVVFQL FLKMAMGQNS DWSSIIKFLL KVALGAVGIG LAFGIASVIW LKFIFNDTVI EITLTIAVSY FAYYTAQEWA GASGVLTVMT LGMFYAAFAR
0301: TAFKGDSQKS LHHFWEMVAY IANTLIFILS GVVIAEGILD SDKIAYQGNS WRFLFLLYVY IQLSRVVVVG VLYPLLCRFG YGLDWKESII LVWSGLRGAV
0401: ALALSLSVKQ SSGNSHISKE TGTLFLFFTG GIVFLTLIVN GSTTQFVLRL LRMDILPAPK KRILEYTKYE MLNKALRAFQ DLGDDEELGP ADWPTVESYI
0501: SSLKGSEGEL VHHPHNGSKI GSLDPKSLKD IRMRFLNGVQ ATYWEMLDEG RISEVTANIL MQSVDEALDQ VSTTLCDWRG LKPHVNFPNY YNFLHSKVVP
0601: RKLVTYFAVE RLESACYISA AFLRAHTIAR QQLYDFLGES NIGSIVINES EKEGEEAKKF LEKVRSSFPQ VLRVVKTKQV TYSVLNHLLG YIENLEKVGL
0701: LEEKEIAHLH DAVQTGLKKL LRNPPIVKLP KLSDMITSHP LSVALPPAFC EPLKHSKKEP MKLRGVTLYK EGSKPTGVWL IFDGIVKWKS KILSNNHSLH
0801: PTFSHGSTLG LYEVLTGKPY LCDLITDSMV LCFFIDSEKI LSLQSDSTID DFLWQESALV LLKLLRPQIF ESVAMQELRA LVSTESSKLT TYVTGESIEI
0901: DCNSIGLLLE GFVKPVGIKE ELISSPAALS PSNGNQSFHN SSEASGIMRV SFSQQATQYI VETRARAIIF NIGAFGADRT LHRRPSSLTP PRSSSSDQLQ
1001: RSFRKEHRGL MSWPENIYAK QQQEINKTTL SLSERAMQLS IFGSMVNVYR RSVSFGGIYN NKLQDNLLYK KLPLNPAQGL VSAKSESSIV TKKQLETRKH
1101: ACQLPLKGES STRQNTMVES SDEEDEDEGI VVRIDSPSKI VFRNDL
0101: LLAVFLPALL FESSFSMEVH QIKRCLGQMV LLAVPGVLIS TACLGSLVKV TFPYEWDWKT SLLLGGLLSA TDPVAVVALL KELGASKKLS TIIEGESLMN
0201: DGTAIVVFQL FLKMAMGQNS DWSSIIKFLL KVALGAVGIG LAFGIASVIW LKFIFNDTVI EITLTIAVSY FAYYTAQEWA GASGVLTVMT LGMFYAAFAR
0301: TAFKGDSQKS LHHFWEMVAY IANTLIFILS GVVIAEGILD SDKIAYQGNS WRFLFLLYVY IQLSRVVVVG VLYPLLCRFG YGLDWKESII LVWSGLRGAV
0401: ALALSLSVKQ SSGNSHISKE TGTLFLFFTG GIVFLTLIVN GSTTQFVLRL LRMDILPAPK KRILEYTKYE MLNKALRAFQ DLGDDEELGP ADWPTVESYI
0501: SSLKGSEGEL VHHPHNGSKI GSLDPKSLKD IRMRFLNGVQ ATYWEMLDEG RISEVTANIL MQSVDEALDQ VSTTLCDWRG LKPHVNFPNY YNFLHSKVVP
0601: RKLVTYFAVE RLESACYISA AFLRAHTIAR QQLYDFLGES NIGSIVINES EKEGEEAKKF LEKVRSSFPQ VLRVVKTKQV TYSVLNHLLG YIENLEKVGL
0701: LEEKEIAHLH DAVQTGLKKL LRNPPIVKLP KLSDMITSHP LSVALPPAFC EPLKHSKKEP MKLRGVTLYK EGSKPTGVWL IFDGIVKWKS KILSNNHSLH
0801: PTFSHGSTLG LYEVLTGKPY LCDLITDSMV LCFFIDSEKI LSLQSDSTID DFLWQESALV LLKLLRPQIF ESVAMQELRA LVSTESSKLT TYVTGESIEI
0901: DCNSIGLLLE GFVKPVGIKE ELISSPAALS PSNGNQSFHN SSEASGIMRV SFSQQATQYI VETRARAIIF NIGAFGADRT LHRRPSSLTP PRSSSSDQLQ
1001: RSFRKEHRGL MSWPENIYAK QQQEINKTTL SLSERAMQLS IFGSMVNVYR RSVSFGGIYN NKLQDNLLYK KLPLNPAQGL VSAKSESSIV TKKQLETRKH
1101: ACQLPLKGES STRQNTMVES SDEEDEDEGI VVRIDSPSKI VFRNDL
Arabidopsis Description
NHX7Sodium/hydrogen exchanger 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKW9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.