Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
22160430
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G021600.2 | Wheat | plastid | 87.55 | 83.88 |
| TraesCSU01G002700.1 | Wheat | plasma membrane | 75.11 | 80.77 |
| TraesCS2A01G034700.1 | Wheat | plasma membrane | 72.66 | 80.17 |
| Os12t0641100-04 | Rice | cytosol, peroxisome, plasma membrane | 78.35 | 77.87 |
| OQU79740 | Sorghum | cytosol, golgi, plasma membrane | 75.28 | 75.55 |
| GSMUA_Achr8P16670_001 | Banana | cytosol | 65.21 | 65.09 |
| Zm00001d031232_P009 | Maize | plastid | 71.17 | 63.79 |
| Bra026197.1-P | Field mustard | plasma membrane | 41.28 | 63.39 |
| AT1G14660.1 | Thale cress | cytosol, golgi, plasma membrane, plastid | 41.54 | 62.7 |
| VIT_01s0011g06550.t01 | Wine grape | cytosol | 62.14 | 62.14 |
| KRH42480 | Soybean | mitochondrion | 60.65 | 60.54 |
| PGSC0003DMT400058653 | Potato | plasma membrane | 58.02 | 57.42 |
| Bra017430.1-P | Field mustard | plasma membrane | 57.23 | 57.33 |
| AT2G01980.1 | Thale cress | plasma membrane | 57.49 | 57.24 |
| CDY04108 | Canola | cytosol, peroxisome, vacuole | 5.52 | 52.94 |
| Solyc04g018090.2.1 | Tomato | golgi, mitochondrion, plasma membrane, plastid | 15.25 | 52.41 |
| CDY04109 | Canola | golgi, plasma membrane | 7.71 | 47.31 |
| PGSC0003DMT400027579 | Potato | extracellular, nucleus, plasma membrane | 5.61 | 45.39 |
| Solyc04g018100.2.1 | Tomato | cytosol | 22.87 | 37.39 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:24.2.8.1.2 | MapMan:26.6.1.2 | InterPro:Cation/H_exchanger | InterPro:Cation/H_exchanger_CPA1 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0015299 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR000595 | InterPro:IPR014710 | PFAM:PF00027 |
| PFAM:PF00999 | PFscan:PS50042 | PANTHER:PTHR10110 | PANTHER:PTHR10110:SF86 | InterPro:RmlC-like_jellyroll | SUPFAM:SSF51206 |
| TMHMM:TMhelix | EnsemblPlantsGene:TraesCS7B01G475500 | EnsemblPlants:TraesCS7B01G475500.1 | InterPro:cNMP-bd-like | InterPro:cNMP-bd_dom | TIGR:cd00038 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr7B:-:731431082..731444497
Molecular Weight (calculated)
126193.0 Da
IEP (calculated)
6.705
GRAVY (calculated)
0.082
Length
1141 amino acids
Sequence
(BLAST)
(BLAST)
0001: MEEPGSSPDD AVLFFGVSLV LGIGSRHLLR GTRVPYTVAL LVLGVALGGL EYGTKHGLGK LGAGIRIWAA INPDLLLAVF LPALLFESSF SMEVHQIKKC
0101: MAQMVLLAVP GVVLSTFLLG TAVKLTFPYD WNWKTSFLFS GLLSATDPVA VVALLKDLGA SKKLSTIIEG ESLMNDGTAI VVFQLFYRMV LGRSFDAGSI
0201: IKFLTEVSLG AVALGLAFGI ASVLWLGFIF NDTIIEISLT LAVSYIAFFT AQDAFEVSGV LAVMTLGMFY AAFAKTAFKG DSQESLHHFW EMAAYIANTL
0301: IFILSGVVIA DGVLQDNIHF EKHGTSWGYL LLLYVFVQIS RAIVVSVLFP LLRHFGYGMD FKEAIVLVWS GLRGAVALSL SLSVKRGSDA DQHYLKSEVG
0401: TMFVFFTGGI VFLTLIVNGS TTQFLLHLLG MGKLSATKFR VLKYTRYEML NKALEAFGDL RDDEELGPAD WITVKKYITC LNDLEDEQAH PHDGPDIDDH
0501: VHTMNLRDTR VRLLNGVQAA YWGMLEEGRI TQSTANMLMR SVDEAMDLVS SQSLCDWNGL RSSVHFPKYY RFLQMSRLPR RLVTYFTVER LELGCYICAA
0601: FLRAHRIARR QLHDFLGDSD IARIVINEST AAGEEAKKFL EDVRVTFPQV LRVLKTRQVT YAVLTHLSDY IQDLRKTGLL EETEIVHLDD ALQTDLKKLK
0701: RNPPLVKMPR VSELLNTHPL VGALPAAARD PLLSNTKESI KGHGTILYRE GSRPTGIWLV STGIVKWTSQ RLSTRHSLDP ILSHGSTLGL YEALIGKPYI
0801: CDIITESVVH CFFIEAEKIE QLRQSDPSIE DFMWQESALV IARMFLPQIF EKMAMHEMRV LISERSSMNI YIKGEDIEIG PNYVGILLEG FLKTENRNSI
0901: KHPAVLLPSN TDLNLFGLQS SALNIIDYCY TASSYQVEAR SRAILLEIGR PDMEADLQRS ASMLSPKLGP PRTQSKEHIG LLRWPENSVR SKGPGNPSLA
1001: EIKNQPGSFS ARALQVSMYG GMMDDMHPAQ RRQPRLDHVE GNQKHSVSYP EVPSRASNTR PLLSVKSAGP SVMSRKSALA QAQASAPALS PFPQQAAGQE
1101: RRVVAEGDNS GDESEGEDVI VTVDSPSMLS FHPSSGPPPD N
0101: MAQMVLLAVP GVVLSTFLLG TAVKLTFPYD WNWKTSFLFS GLLSATDPVA VVALLKDLGA SKKLSTIIEG ESLMNDGTAI VVFQLFYRMV LGRSFDAGSI
0201: IKFLTEVSLG AVALGLAFGI ASVLWLGFIF NDTIIEISLT LAVSYIAFFT AQDAFEVSGV LAVMTLGMFY AAFAKTAFKG DSQESLHHFW EMAAYIANTL
0301: IFILSGVVIA DGVLQDNIHF EKHGTSWGYL LLLYVFVQIS RAIVVSVLFP LLRHFGYGMD FKEAIVLVWS GLRGAVALSL SLSVKRGSDA DQHYLKSEVG
0401: TMFVFFTGGI VFLTLIVNGS TTQFLLHLLG MGKLSATKFR VLKYTRYEML NKALEAFGDL RDDEELGPAD WITVKKYITC LNDLEDEQAH PHDGPDIDDH
0501: VHTMNLRDTR VRLLNGVQAA YWGMLEEGRI TQSTANMLMR SVDEAMDLVS SQSLCDWNGL RSSVHFPKYY RFLQMSRLPR RLVTYFTVER LELGCYICAA
0601: FLRAHRIARR QLHDFLGDSD IARIVINEST AAGEEAKKFL EDVRVTFPQV LRVLKTRQVT YAVLTHLSDY IQDLRKTGLL EETEIVHLDD ALQTDLKKLK
0701: RNPPLVKMPR VSELLNTHPL VGALPAAARD PLLSNTKESI KGHGTILYRE GSRPTGIWLV STGIVKWTSQ RLSTRHSLDP ILSHGSTLGL YEALIGKPYI
0801: CDIITESVVH CFFIEAEKIE QLRQSDPSIE DFMWQESALV IARMFLPQIF EKMAMHEMRV LISERSSMNI YIKGEDIEIG PNYVGILLEG FLKTENRNSI
0901: KHPAVLLPSN TDLNLFGLQS SALNIIDYCY TASSYQVEAR SRAILLEIGR PDMEADLQRS ASMLSPKLGP PRTQSKEHIG LLRWPENSVR SKGPGNPSLA
1001: EIKNQPGSFS ARALQVSMYG GMMDDMHPAQ RRQPRLDHVE GNQKHSVSYP EVPSRASNTR PLLSVKSAGP SVMSRKSALA QAQASAPALS PFPQQAAGQE
1101: RRVVAEGDNS GDESEGEDVI VTVDSPSMLS FHPSSGPPPD N
0001: MTTVIDATMA YRFLEEATDS SSSSSSSKLE SSPVDAVLFV GMSLVLGIAS RHLLRGTRVP YTVALLVIGI ALGSLEYGAK HNLGKIGHGI RIWNEIDPEL
0101: LLAVFLPALL FESSFSMEVH QIKRCLGQMV LLAVPGVLIS TACLGSLVKV TFPYEWDWKT SLLLGGLLSA TDPVAVVALL KELGASKKLS TIIEGESLMN
0201: DGTAIVVFQL FLKMAMGQNS DWSSIIKFLL KVALGAVGIG LAFGIASVIW LKFIFNDTVI EITLTIAVSY FAYYTAQEWA GASGVLTVMT LGMFYAAFAR
0301: TAFKGDSQKS LHHFWEMVAY IANTLIFILS GVVIAEGILD SDKIAYQGNS WRFLFLLYVY IQLSRVVVVG VLYPLLCRFG YGLDWKESII LVWSGLRGAV
0401: ALALSLSVKQ SSGNSHISKE TGTLFLFFTG GIVFLTLIVN GSTTQFVLRL LRMDILPAPK KRILEYTKYE MLNKALRAFQ DLGDDEELGP ADWPTVESYI
0501: SSLKGSEGEL VHHPHNGSKI GSLDPKSLKD IRMRFLNGVQ ATYWEMLDEG RISEVTANIL MQSVDEALDQ VSTTLCDWRG LKPHVNFPNY YNFLHSKVVP
0601: RKLVTYFAVE RLESACYISA AFLRAHTIAR QQLYDFLGES NIGSIVINES EKEGEEAKKF LEKVRSSFPQ VLRVVKTKQV TYSVLNHLLG YIENLEKVGL
0701: LEEKEIAHLH DAVQTGLKKL LRNPPIVKLP KLSDMITSHP LSVALPPAFC EPLKHSKKEP MKLRGVTLYK EGSKPTGVWL IFDGIVKWKS KILSNNHSLH
0801: PTFSHGSTLG LYEVLTGKPY LCDLITDSMV LCFFIDSEKI LSLQSDSTID DFLWQESALV LLKLLRPQIF ESVAMQELRA LVSTESSKLT TYVTGESIEI
0901: DCNSIGLLLE GFVKPVGIKE ELISSPAALS PSNGNQSFHN SSEASGIMRV SFSQQATQYI VETRARAIIF NIGAFGADRT LHRRPSSLTP PRSSSSDQLQ
1001: RSFRKEHRGL MSWPENIYAK QQQEINKTTL SLSERAMQLS IFGSMVNVYR RSVSFGGIYN NKLQDNLLYK KLPLNPAQGL VSAKSESSIV TKKQLETRKH
1101: ACQLPLKGES STRQNTMVES SDEEDEDEGI VVRIDSPSKI VFRNDL
0101: LLAVFLPALL FESSFSMEVH QIKRCLGQMV LLAVPGVLIS TACLGSLVKV TFPYEWDWKT SLLLGGLLSA TDPVAVVALL KELGASKKLS TIIEGESLMN
0201: DGTAIVVFQL FLKMAMGQNS DWSSIIKFLL KVALGAVGIG LAFGIASVIW LKFIFNDTVI EITLTIAVSY FAYYTAQEWA GASGVLTVMT LGMFYAAFAR
0301: TAFKGDSQKS LHHFWEMVAY IANTLIFILS GVVIAEGILD SDKIAYQGNS WRFLFLLYVY IQLSRVVVVG VLYPLLCRFG YGLDWKESII LVWSGLRGAV
0401: ALALSLSVKQ SSGNSHISKE TGTLFLFFTG GIVFLTLIVN GSTTQFVLRL LRMDILPAPK KRILEYTKYE MLNKALRAFQ DLGDDEELGP ADWPTVESYI
0501: SSLKGSEGEL VHHPHNGSKI GSLDPKSLKD IRMRFLNGVQ ATYWEMLDEG RISEVTANIL MQSVDEALDQ VSTTLCDWRG LKPHVNFPNY YNFLHSKVVP
0601: RKLVTYFAVE RLESACYISA AFLRAHTIAR QQLYDFLGES NIGSIVINES EKEGEEAKKF LEKVRSSFPQ VLRVVKTKQV TYSVLNHLLG YIENLEKVGL
0701: LEEKEIAHLH DAVQTGLKKL LRNPPIVKLP KLSDMITSHP LSVALPPAFC EPLKHSKKEP MKLRGVTLYK EGSKPTGVWL IFDGIVKWKS KILSNNHSLH
0801: PTFSHGSTLG LYEVLTGKPY LCDLITDSMV LCFFIDSEKI LSLQSDSTID DFLWQESALV LLKLLRPQIF ESVAMQELRA LVSTESSKLT TYVTGESIEI
0901: DCNSIGLLLE GFVKPVGIKE ELISSPAALS PSNGNQSFHN SSEASGIMRV SFSQQATQYI VETRARAIIF NIGAFGADRT LHRRPSSLTP PRSSSSDQLQ
1001: RSFRKEHRGL MSWPENIYAK QQQEINKTTL SLSERAMQLS IFGSMVNVYR RSVSFGGIYN NKLQDNLLYK KLPLNPAQGL VSAKSESSIV TKKQLETRKH
1101: ACQLPLKGES STRQNTMVES SDEEDEDEGI VVRIDSPSKI VFRNDL
Arabidopsis Description
NHX7Sodium/hydrogen exchanger 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKW9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.