Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 4
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G462000.1 | Wheat | plasma membrane | 94.25 | 95.86 |
| TraesCS2A01G133600.1 | Wheat | endoplasmic reticulum | 72.22 | 94.42 |
| TraesCS3A01G023200.2 | Wheat | golgi | 71.53 | 63.13 |
| TraesCS2A01G034700.1 | Wheat | plasma membrane | 63.0 | 61.41 |
| Bra026197.1-P | Field mustard | plasma membrane | 43.55 | 59.08 |
| AT1G14660.1 | Thale cress | cytosol, golgi, plasma membrane, plastid | 43.15 | 57.54 |
| GSMUA_Achr8P16670_001 | Banana | cytosol | 63.1 | 55.64 |
| VIT_01s0011g06550.t01 | Wine grape | cytosol | 61.9 | 54.69 |
| KRH42480 | Soybean | mitochondrion | 58.73 | 51.79 |
| PGSC0003DMT400058653 | Potato | plasma membrane | 58.53 | 51.17 |
| Bra017430.1-P | Field mustard | plasma membrane | 57.24 | 50.66 |
| AT2G01980.1 | Thale cress | plasma membrane | 56.35 | 49.56 |
| Solyc04g018090.2.1 | Tomato | golgi, mitochondrion, plasma membrane, plastid | 15.87 | 48.19 |
| CDY04109 | Canola | golgi, plasma membrane | 7.44 | 40.32 |
| PGSC0003DMT400027579 | Potato | extracellular, nucleus, plasma membrane | 5.56 | 39.72 |
| CDY04108 | Canola | cytosol, peroxisome, vacuole | 4.66 | 39.5 |
| Solyc04g018100.2.1 | Tomato | cytosol | 25.4 | 36.68 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:24.2.8.1.2 | MapMan:26.6.1.2 | InterPro:Cation/H_exchanger | InterPro:Cation/H_exchanger_CPA1 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0015299 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:IPR000595 | InterPro:IPR014710 | PFAM:PF00999 |
| PFscan:PS50042 | PANTHER:PTHR10110 | PANTHER:PTHR10110:SF86 | InterPro:RmlC-like_jellyroll | SUPFAM:SSF51206 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS7A01G397700 | EnsemblPlants:TraesCS7A01G397700.1 | InterPro:cNMP-bd-like | InterPro:cNMP-bd_dom | SEG:seg | : |
Description
No Description!
Coordinates
chr7A:+:576440908..576454559
Molecular Weight (calculated)
109888.0 Da
IEP (calculated)
6.095
GRAVY (calculated)
0.205
Length
1008 amino acids
Sequence
(BLAST)
(BLAST)
0001: MATAAVPDDA VLFAGVSLVL GAACRHLLDG TRVPYTIALL XXXXXXXXXX YGTKDGLGKL GVGMRIWANI NPDLLLAAFL PALLFESAFS MEAHQIKKCM
0101: AQMLLLAGPG VLMSTFLLGT ALKLTSPYDW NWETSLLLGG LLSATDPVAV VAVLKELGTS KKLSTIIEGE SLMNDGVSVV VYQLFLQMVL GRSFNTGSIL
0201: MFLSEVSLGA VALGLAFAII SLLWLGFTFN DTILEMTLTL AVSYIAFYTV QDALKYSGIL TVTALGMFYA AFAKTTFKGD NRRSLHDFWE IVAYIANTLI
0301: FILSGVIIAD GVLRHNVHFE RHGTSWGFLL LLYFYVQMAR AAVVGALYLL LRYFGYGLDL KEAIIIVWSG LRGAVSLSLA LSVKRASDTA QPFLKPEVGT
0401: MFVFFTGGIV FLTLILNGST TQFLLHALGM DNLSVTKLRM LNYTRHEILN NTLEAFGDLK DDEELGPADW VTVKKYITGL SNLEDEHAHP HDDNHDHVHT
0501: MNLKDGRVRL LNGVQASYWA MLDQGQITQA TANILMRSVD EAMDLVSSRP LCDWNSLQSS VHFPSYYRFL SASMLPQSFI TYFTVQRLES GCYICAAFLR
0601: AHRTARRQLQ DFLGDSEIAK IVIDESNAGG EEARKFLEEV GCTFPQLLCV LKTRQVTYAV LTHLSENVQN LWKTGLLEEK EMAHLDDAWQ TDLKKLKRNP
0701: QLVKMPRVGD LLGTHPLVGM LPAAVRAPLL SNTKEKVKGH GAALYMEGSR ATGIWIVSIG AVKWRSQRLS SRHSLHPIFP HGSTLGLYEV LTGKSCLCDM
0801: ITDSLVRCFF IEAEKIDQLR WSDPSVEAFL WQESAAVIAK LLIPRVFEKM TMQETRLLVS TGSTMNLYTK GEDIMLEHNY IGILLEGTLK AENQNSILPP
0901: GVLLPSNMDL ELLGLESSAM NRMDSCYSAD SYQVEAQARV LIFEVGRLFT EANGQRNQPG GSFSAEALQL SVEESTGEEQ VIITVDSPNK LPLGDSSAGS
1001: SSGVTRGS
0101: AQMLLLAGPG VLMSTFLLGT ALKLTSPYDW NWETSLLLGG LLSATDPVAV VAVLKELGTS KKLSTIIEGE SLMNDGVSVV VYQLFLQMVL GRSFNTGSIL
0201: MFLSEVSLGA VALGLAFAII SLLWLGFTFN DTILEMTLTL AVSYIAFYTV QDALKYSGIL TVTALGMFYA AFAKTTFKGD NRRSLHDFWE IVAYIANTLI
0301: FILSGVIIAD GVLRHNVHFE RHGTSWGFLL LLYFYVQMAR AAVVGALYLL LRYFGYGLDL KEAIIIVWSG LRGAVSLSLA LSVKRASDTA QPFLKPEVGT
0401: MFVFFTGGIV FLTLILNGST TQFLLHALGM DNLSVTKLRM LNYTRHEILN NTLEAFGDLK DDEELGPADW VTVKKYITGL SNLEDEHAHP HDDNHDHVHT
0501: MNLKDGRVRL LNGVQASYWA MLDQGQITQA TANILMRSVD EAMDLVSSRP LCDWNSLQSS VHFPSYYRFL SASMLPQSFI TYFTVQRLES GCYICAAFLR
0601: AHRTARRQLQ DFLGDSEIAK IVIDESNAGG EEARKFLEEV GCTFPQLLCV LKTRQVTYAV LTHLSENVQN LWKTGLLEEK EMAHLDDAWQ TDLKKLKRNP
0701: QLVKMPRVGD LLGTHPLVGM LPAAVRAPLL SNTKEKVKGH GAALYMEGSR ATGIWIVSIG AVKWRSQRLS SRHSLHPIFP HGSTLGLYEV LTGKSCLCDM
0801: ITDSLVRCFF IEAEKIDQLR WSDPSVEAFL WQESAAVIAK LLIPRVFEKM TMQETRLLVS TGSTMNLYTK GEDIMLEHNY IGILLEGTLK AENQNSILPP
0901: GVLLPSNMDL ELLGLESSAM NRMDSCYSAD SYQVEAQARV LIFEVGRLFT EANGQRNQPG GSFSAEALQL SVEESTGEEQ VIITVDSPNK LPLGDSSAGS
1001: SSGVTRGS
001: MTSIIGAALP YKSPEKAIAS SSYSAENDSS PVDAVIFAGT SLVLGTACRY LFNGTRVPYT VVLLVIGIFL GSLEYGTKHN LGKLGHGIRI WNGINPDLLL
101: AVFLPVLLFE SSFSMDVHQI KRCMGQMVLL AGPGVLISTF CLGALIKLTF PYNWDWKTSL LLGGLLGATD PVAVVALLKE LGASKKMTTL IDGESLMNDG
201: VSVVVFQLFF KMVMGHNSDW GSIIKFLVQN SFGAVGIGLA FGIASVFWLK FIFNDTVAQI TVTLSASYFA YYTAQEWAGV SGILTVMILG MFFAAFARTA
301: FKGDSHQSLH HFWEMAAYIA NTLVFMLSGV IIAESVLSGQ TISYKGNSWS FLFLLYLYVQ LSRCVVVGVL YPLLCRSGYG LDWKESIILT WSGLRGAVSL
401: SLALSVKQSS GNSYLSSDTG TRFLFLTGGI VFLTLVVNGS TTQLLLHLLR MDTLTATKKR ILEYTKFEMM KTALKAFENL GDDEELGSAD WPTVIRHISS
501: LKDLEGRQVN PHDGYEAGSL DPTNIMDIRI RFLNGVQAAY WEMLDDGRIT QCTANVLMQS VDEALDLVST SSLSDWRGLE PRVHFPNYYK FLQSKIIPHK
601: LVTHLIVERL ESACYISSAF LRAHRIARQQ LHIFLGNSNI ASTVINESEV EGEEAKQFLE DVRDSFPQVL SVLKTRQVTH YVLNHLNGYI KNLEKVGLLE
701: GKEVSHLHDV VQSDLKKLLR HPPSLKLPNV DDLITSNPLL KDRSSFRSLA IGETDA
101: AVFLPVLLFE SSFSMDVHQI KRCMGQMVLL AGPGVLISTF CLGALIKLTF PYNWDWKTSL LLGGLLGATD PVAVVALLKE LGASKKMTTL IDGESLMNDG
201: VSVVVFQLFF KMVMGHNSDW GSIIKFLVQN SFGAVGIGLA FGIASVFWLK FIFNDTVAQI TVTLSASYFA YYTAQEWAGV SGILTVMILG MFFAAFARTA
301: FKGDSHQSLH HFWEMAAYIA NTLVFMLSGV IIAESVLSGQ TISYKGNSWS FLFLLYLYVQ LSRCVVVGVL YPLLCRSGYG LDWKESIILT WSGLRGAVSL
401: SLALSVKQSS GNSYLSSDTG TRFLFLTGGI VFLTLVVNGS TTQLLLHLLR MDTLTATKKR ILEYTKFEMM KTALKAFENL GDDEELGSAD WPTVIRHISS
501: LKDLEGRQVN PHDGYEAGSL DPTNIMDIRI RFLNGVQAAY WEMLDDGRIT QCTANVLMQS VDEALDLVST SSLSDWRGLE PRVHFPNYYK FLQSKIIPHK
601: LVTHLIVERL ESACYISSAF LRAHRIARQQ LHIFLGNSNI ASTVINESEV EGEEAKQFLE DVRDSFPQVL SVLKTRQVTH YVLNHLNGYI KNLEKVGLLE
701: GKEVSHLHDV VQSDLKKLLR HPPSLKLPNV DDLITSNPLL KDRSSFRSLA IGETDA
Arabidopsis Description
NHX8Sodium/hydrogen exchanger 8 [Source:UniProtKB/Swiss-Prot;Acc:Q3YL57]
SUBAcon: [plasma membrane,golgi,plastid,cytosol]
SUBAcon: [plasma membrane,golgi,plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.