Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 1
- golgi 2
- plasma membrane 4
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
22908117
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Solyc08g005270.2.1 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G01980.1 | Solyc08g005270.2.1 | AT1G32230.1 | 17023541 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400058653 | Potato | plasma membrane | 96.61 | 96.44 |
| VIT_01s0011g06550.t01 | Wine grape | cytosol | 69.42 | 70.03 |
| KRH42480 | Soybean | mitochondrion | 66.12 | 66.58 |
| Bra026197.1-P | Field mustard | plasma membrane | 41.53 | 64.33 |
| AT1G14660.1 | Thale cress | cytosol, golgi, plasma membrane, plastid | 41.7 | 63.49 |
| AT2G01980.1 | Thale cress | plasma membrane | 62.03 | 62.3 |
| Bra017430.1-P | Field mustard | plasma membrane | 61.16 | 61.81 |
| Solyc04g018090.2.1 | Tomato | golgi, mitochondrion, plasma membrane, plastid | 15.29 | 53.01 |
| CDY04108 | Canola | cytosol, peroxisome, vacuole | 4.95 | 47.9 |
| CDY04109 | Canola | golgi, plasma membrane | 7.3 | 45.16 |
| Solyc04g018100.2.1 | Tomato | cytosol | 22.94 | 37.82 |
| HORVU7Hr1G085980.11 | Barley | plastid | 3.21 | 20.9 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:24.2.8.1.2 | MapMan:26.6.1.2 | InterPro:Cation/H_exchanger | InterPro:Cation/H_exchanger_CPA1 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005886 |
| GO:GO:0006810 | GO:GO:0006812 | GO:GO:0008150 | GO:GO:0009536 | GO:GO:0009941 | GO:GO:0009987 |
| GO:GO:0015297 | GO:GO:0015299 | GO:GO:0015385 | GO:GO:0015386 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0019725 | GO:GO:0051453 | GO:GO:0055085 | GO:GO:0071805 | GO:GO:0098719 | GO:GO:1902600 |
| InterPro:IPR000595 | InterPro:IPR014710 | UniProt:K4AS69 | PFAM:PF00999 | PFscan:PS50042 | PANTHER:PTHR10110 |
| PANTHER:PTHR10110:SF86 | InterPro:RmlC-like_jellyroll | SUPFAM:SSF51206 | EnsemblPlantsGene:Solyc01g005020.2 | EnsemblPlants:Solyc01g005020.2.1 | TMHMM:TMhelix |
| UniParc:UPI00027618CE | InterPro:cNMP-bd-like | InterPro:cNMP-bd_dom | SEG:seg | : | : |
Description
No Description!
Coordinates
chr1:-:30620..43938
Molecular Weight (calculated)
127509.0 Da
IEP (calculated)
6.273
GRAVY (calculated)
0.083
Length
1151 amino acids
Sequence
(BLAST)
(BLAST)
0001: MELLVETRPF RIVEESISAE SSDPTNAVIF VGISLLLGIG CRHLLRGTRV PYSVALLVLG IGLGALEYGT HHGLGRIGDG IRIWANIDPD LLLAVFLPAL
0101: LFESAFSMEI HQIKRCAVQM LLLAGPGVLI STFFLGAALK IAFPYNWSWS TSLLLGGLLS ATDPVAVVAL LKELGASKKL GTIIEGESLM NDGTAIVVYQ
0201: LLLRMVTGWT FNWGAVIKFL VQVSLGAVGF GIAFGIASVL WLGFIFNDTV IEISLTLAVS YVAYFTAQQG ADVSGVLTVM TLGMFYSAVA KTAFKGESHQ
0301: SLHHFWEMVS YIANTLIFIL SGVVIAEGIL AGDNIFKIYD NSWGYLILLY VLILVSRAVV VGVLYPFLRY FGYGLDLKEA FILVWGGLRG AVALSLSLSV
0401: KRSSDGSQYI SSDTGTLFVF LTGGVVFLTL IINGSTTQFA LHYLGMDKLS AAKKRILNYT KYEMLNKALE AFGDLGDDEE LGPADWPTVK RYITSLNDVE
0501: GEPVHPHTSS GNDDNVDHMH LEDIRIRLLN GVQAAYWEML NEGRIPQTIA NLLMQSVEEA NDVVSHEPLC DWKGLKSYVN IPNYYKFLQT SFVHRKLVTY
0601: FTVERLESAC YICAGFLRAH RTARQQLNEF IGESEIASLV IKESEEEGED ARKFLEEVRV SFPQVLRVVK TRQVTYAVLN HLIDYVHNLE KIGILEEKEM
0701: AHLHDAVQTD LKRLVRNPPL VKFPKIRDLI SVNPLLGALP PTVRETLIGS TKEIMKLRGA TLYEEGSKAT RVWLISNGVV KWSSKSTSNI HLLHPTFSHG
0801: STLGLYEVLV GKPYICDIIT DSVALCFSVD NERILTALRS DPAVEDFFWQ ESALVLAKVL LPQMFETTKM QDMRTLVAER STMSIYIRGE SFELPHHSIG
0901: FLLEGFVKSH GSHEGLLSAP APLLPLALEQ QSFHNTEASG VHAASFSHQP SQYQVETRAR VIMFDIAGFL SGRGLQRRSS SLLSHSIDHP SRSFSRELGG
1001: LMSWPENTYK AMQHRQDVER TGQQETNMST RAMQLNIFGS MISDTRSRSR SFPGISAAKT SHSQSYPEVR SDGVQTLVSV RSEGSTTLRK KAQVQGENKD
1101: MSIQLPSAPI EESDTREYSS DDSGGEDEHL IRIDSGRPSF PQWIAEEDKT S
0101: LFESAFSMEI HQIKRCAVQM LLLAGPGVLI STFFLGAALK IAFPYNWSWS TSLLLGGLLS ATDPVAVVAL LKELGASKKL GTIIEGESLM NDGTAIVVYQ
0201: LLLRMVTGWT FNWGAVIKFL VQVSLGAVGF GIAFGIASVL WLGFIFNDTV IEISLTLAVS YVAYFTAQQG ADVSGVLTVM TLGMFYSAVA KTAFKGESHQ
0301: SLHHFWEMVS YIANTLIFIL SGVVIAEGIL AGDNIFKIYD NSWGYLILLY VLILVSRAVV VGVLYPFLRY FGYGLDLKEA FILVWGGLRG AVALSLSLSV
0401: KRSSDGSQYI SSDTGTLFVF LTGGVVFLTL IINGSTTQFA LHYLGMDKLS AAKKRILNYT KYEMLNKALE AFGDLGDDEE LGPADWPTVK RYITSLNDVE
0501: GEPVHPHTSS GNDDNVDHMH LEDIRIRLLN GVQAAYWEML NEGRIPQTIA NLLMQSVEEA NDVVSHEPLC DWKGLKSYVN IPNYYKFLQT SFVHRKLVTY
0601: FTVERLESAC YICAGFLRAH RTARQQLNEF IGESEIASLV IKESEEEGED ARKFLEEVRV SFPQVLRVVK TRQVTYAVLN HLIDYVHNLE KIGILEEKEM
0701: AHLHDAVQTD LKRLVRNPPL VKFPKIRDLI SVNPLLGALP PTVRETLIGS TKEIMKLRGA TLYEEGSKAT RVWLISNGVV KWSSKSTSNI HLLHPTFSHG
0801: STLGLYEVLV GKPYICDIIT DSVALCFSVD NERILTALRS DPAVEDFFWQ ESALVLAKVL LPQMFETTKM QDMRTLVAER STMSIYIRGE SFELPHHSIG
0901: FLLEGFVKSH GSHEGLLSAP APLLPLALEQ QSFHNTEASG VHAASFSHQP SQYQVETRAR VIMFDIAGFL SGRGLQRRSS SLLSHSIDHP SRSFSRELGG
1001: LMSWPENTYK AMQHRQDVER TGQQETNMST RAMQLNIFGS MISDTRSRSR SFPGISAAKT SHSQSYPEVR SDGVQTLVSV RSEGSTTLRK KAQVQGENKD
1101: MSIQLPSAPI EESDTREYSS DDSGGEDEHL IRIDSGRPSF PQWIAEEDKT S
0001: MTTVIDATMA YRFLEEATDS SSSSSSSKLE SSPVDAVLFV GMSLVLGIAS RHLLRGTRVP YTVALLVIGI ALGSLEYGAK HNLGKIGHGI RIWNEIDPEL
0101: LLAVFLPALL FESSFSMEVH QIKRCLGQMV LLAVPGVLIS TACLGSLVKV TFPYEWDWKT SLLLGGLLSA TDPVAVVALL KELGASKKLS TIIEGESLMN
0201: DGTAIVVFQL FLKMAMGQNS DWSSIIKFLL KVALGAVGIG LAFGIASVIW LKFIFNDTVI EITLTIAVSY FAYYTAQEWA GASGVLTVMT LGMFYAAFAR
0301: TAFKGDSQKS LHHFWEMVAY IANTLIFILS GVVIAEGILD SDKIAYQGNS WRFLFLLYVY IQLSRVVVVG VLYPLLCRFG YGLDWKESII LVWSGLRGAV
0401: ALALSLSVKQ SSGNSHISKE TGTLFLFFTG GIVFLTLIVN GSTTQFVLRL LRMDILPAPK KRILEYTKYE MLNKALRAFQ DLGDDEELGP ADWPTVESYI
0501: SSLKGSEGEL VHHPHNGSKI GSLDPKSLKD IRMRFLNGVQ ATYWEMLDEG RISEVTANIL MQSVDEALDQ VSTTLCDWRG LKPHVNFPNY YNFLHSKVVP
0601: RKLVTYFAVE RLESACYISA AFLRAHTIAR QQLYDFLGES NIGSIVINES EKEGEEAKKF LEKVRSSFPQ VLRVVKTKQV TYSVLNHLLG YIENLEKVGL
0701: LEEKEIAHLH DAVQTGLKKL LRNPPIVKLP KLSDMITSHP LSVALPPAFC EPLKHSKKEP MKLRGVTLYK EGSKPTGVWL IFDGIVKWKS KILSNNHSLH
0801: PTFSHGSTLG LYEVLTGKPY LCDLITDSMV LCFFIDSEKI LSLQSDSTID DFLWQESALV LLKLLRPQIF ESVAMQELRA LVSTESSKLT TYVTGESIEI
0901: DCNSIGLLLE GFVKPVGIKE ELISSPAALS PSNGNQSFHN SSEASGIMRV SFSQQATQYI VETRARAIIF NIGAFGADRT LHRRPSSLTP PRSSSSDQLQ
1001: RSFRKEHRGL MSWPENIYAK QQQEINKTTL SLSERAMQLS IFGSMVNVYR RSVSFGGIYN NKLQDNLLYK KLPLNPAQGL VSAKSESSIV TKKQLETRKH
1101: ACQLPLKGES STRQNTMVES SDEEDEDEGI VVRIDSPSKI VFRNDL
0101: LLAVFLPALL FESSFSMEVH QIKRCLGQMV LLAVPGVLIS TACLGSLVKV TFPYEWDWKT SLLLGGLLSA TDPVAVVALL KELGASKKLS TIIEGESLMN
0201: DGTAIVVFQL FLKMAMGQNS DWSSIIKFLL KVALGAVGIG LAFGIASVIW LKFIFNDTVI EITLTIAVSY FAYYTAQEWA GASGVLTVMT LGMFYAAFAR
0301: TAFKGDSQKS LHHFWEMVAY IANTLIFILS GVVIAEGILD SDKIAYQGNS WRFLFLLYVY IQLSRVVVVG VLYPLLCRFG YGLDWKESII LVWSGLRGAV
0401: ALALSLSVKQ SSGNSHISKE TGTLFLFFTG GIVFLTLIVN GSTTQFVLRL LRMDILPAPK KRILEYTKYE MLNKALRAFQ DLGDDEELGP ADWPTVESYI
0501: SSLKGSEGEL VHHPHNGSKI GSLDPKSLKD IRMRFLNGVQ ATYWEMLDEG RISEVTANIL MQSVDEALDQ VSTTLCDWRG LKPHVNFPNY YNFLHSKVVP
0601: RKLVTYFAVE RLESACYISA AFLRAHTIAR QQLYDFLGES NIGSIVINES EKEGEEAKKF LEKVRSSFPQ VLRVVKTKQV TYSVLNHLLG YIENLEKVGL
0701: LEEKEIAHLH DAVQTGLKKL LRNPPIVKLP KLSDMITSHP LSVALPPAFC EPLKHSKKEP MKLRGVTLYK EGSKPTGVWL IFDGIVKWKS KILSNNHSLH
0801: PTFSHGSTLG LYEVLTGKPY LCDLITDSMV LCFFIDSEKI LSLQSDSTID DFLWQESALV LLKLLRPQIF ESVAMQELRA LVSTESSKLT TYVTGESIEI
0901: DCNSIGLLLE GFVKPVGIKE ELISSPAALS PSNGNQSFHN SSEASGIMRV SFSQQATQYI VETRARAIIF NIGAFGADRT LHRRPSSLTP PRSSSSDQLQ
1001: RSFRKEHRGL MSWPENIYAK QQQEINKTTL SLSERAMQLS IFGSMVNVYR RSVSFGGIYN NKLQDNLLYK KLPLNPAQGL VSAKSESSIV TKKQLETRKH
1101: ACQLPLKGES STRQNTMVES SDEEDEDEGI VVRIDSPSKI VFRNDL
Arabidopsis Description
NHX7Sodium/hydrogen exchanger 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9LKW9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.